RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 C14orf93Q9H972 538 aaKnown RBP19.25■□□□□ 0.67
NPAS3-209ENST00000551008 ADRA2BP18089 450 aa19.24■□□□□ 0.67
NPAS3-209ENST00000551008 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
NPAS3-209ENST00000551008 CFAP70Q5T0N1 1121 aa19.23■□□□□ 0.67
NPAS3-209ENST00000551008 WAPLQ7Z5K2 1190 aa19.23■□□□□ 0.67
NPAS3-209ENST00000551008 STK26Q9P289 416 aa19.23■□□□□ 0.67
NPAS3-209ENST00000551008 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
NPAS3-209ENST00000551008 ORAI2Q96SN7 254 aa19.21■□□□□ 0.67
NPAS3-209ENST00000551008 POTEAQ6S8J7 498 aa19.19■□□□□ 0.66
NPAS3-209ENST00000551008 DLC1Q96QB1 1528 aa19.19■□□□□ 0.66
NPAS3-209ENST00000551008 SPATA31A6Q5VVP1 1343 aa19.18■□□□□ 0.66
NPAS3-209ENST00000551008 PNPLA6Q8IY17 1366 aa19.18■□□□□ 0.66
NPAS3-209ENST00000551008 USP32Q8NFA0 1604 aa19.16■□□□□ 0.66
NPAS3-209ENST00000551008 PXDNQ92626 1479 aa19.16■□□□□ 0.66
NPAS3-209ENST00000551008 ADGRB2O60241 1585 aa19.15■□□□□ 0.66
NPAS3-209ENST00000551008 ARHGEF28Q8N1W1 1705 aaKnown RBP19.15■□□□□ 0.66
NPAS3-209ENST00000551008 SIRT1Q96EB6 747 aa19.15■□□□□ 0.66
NPAS3-209ENST00000551008 SOS2Q07890 1332 aaPredicted RBP19.15■□□□□ 0.66
NPAS3-209ENST00000551008 COL22A1Q8NFW1 1626 aaPredicted RBP19.14■□□□□ 0.66
NPAS3-209ENST00000551008 DCAF11Q8TEB1 546 aa19.13■□□□□ 0.65
NPAS3-209ENST00000551008 KIAA1210Q9ULL0 1709 aa19.12■□□□□ 0.65
NPAS3-209ENST00000551008 KIF1AQ12756 1690 aa19.12■□□□□ 0.65
NPAS3-209ENST00000551008 KDM2AQ9Y2K7 1162 aa19.12■□□□□ 0.65
NPAS3-209ENST00000551008 NUTM2FA1L443 756 aa19.1■□□□□ 0.65
NPAS3-209ENST00000551008 LRRC59Q96AG4 307 aaKnown RBP19.1■□□□□ 0.65
NPAS3-209ENST00000551008 PRAM1Q96QH2 718 aa19.09■□□□□ 0.65
NPAS3-209ENST00000551008 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.64
NPAS3-209ENST00000551008 NUTM2BA6NNL0 878 aaPredicted RBP19.07■□□□□ 0.64
NPAS3-209ENST00000551008 NUTM2EB1AL46 878 aaPredicted RBP19.07■□□□□ 0.64
NPAS3-209ENST00000551008 NUTM2AQ8IVF1 878 aaPredicted RBP19.07■□□□□ 0.64
NPAS3-209ENST00000551008 MARF1Q9Y4F3 1742 aaKnown RBP19.07■□□□□ 0.64
NPAS3-209ENST00000551008 SAFB2Q14151 953 aaKnown RBP eCLIP19.06■□□□□ 0.64
NPAS3-209ENST00000551008 STAC3Q96MF2 364 aa19.05■□□□□ 0.64
NPAS3-209ENST00000551008 TRAK1Q9UPV9 953 aa19.05■□□□□ 0.64
NPAS3-209ENST00000551008 NPHP3Q7Z494 1330 aa19.04■□□□□ 0.64
NPAS3-209ENST00000551008 FOXO3O43524 673 aa19.04■□□□□ 0.64
NPAS3-209ENST00000551008 XPCQ01831 940 aaPredicted RBP19.04■□□□□ 0.64
NPAS3-209ENST00000551008 PIAS4Q8N2W9 510 aaPredicted RBP19.04■□□□□ 0.64
NPAS3-209ENST00000551008 MEX3CQ5U5Q3 659 aaKnown RBP19.03■□□□□ 0.64
NPAS3-209ENST00000551008 ABCA3Q99758 1704 aa19.03■□□□□ 0.64
NPAS3-209ENST00000551008 TRPM3Q9HCF6 1732 aaPredicted RBP19.03■□□□□ 0.64
NPAS3-209ENST00000551008 AFF2P51816 1311 aa19.01■□□□□ 0.63
NPAS3-209ENST00000551008 ANKARQ7Z5J8 1434 aa19.01■□□□□ 0.63
NPAS3-209ENST00000551008 PRR36Q9H6K5 1346 aa19■□□□□ 0.63
NPAS3-209ENST00000551008 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
NPAS3-209ENST00000551008 POGKQ9P215 609 aa18.99■□□□□ 0.63
NPAS3-209ENST00000551008 TRPM1Q7Z4N2 1603 aa18.99■□□□□ 0.63
NPAS3-209ENST00000551008 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
NPAS3-209ENST00000551008 HIRIP3Q9BW71 556 aaPredicted RBP18.98■□□□□ 0.63
NPAS3-209ENST00000551008 TOPAZ1Q8N9V7 1692 aa18.98■□□□□ 0.63
NPAS3-209ENST00000551008 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
NPAS3-209ENST00000551008 ZNF772Q68DY9 489 aaPredicted RBP18.97■□□□□ 0.63
NPAS3-209ENST00000551008 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
NPAS3-209ENST00000551008 PHF8Q9UPP1 1060 aa18.97■□□□□ 0.63
NPAS3-209ENST00000551008 ALS2Q96Q42 1657 aa18.97■□□□□ 0.63
NPAS3-209ENST00000551008 SPATA31A3Q5VYP0 1347 aa18.97■□□□□ 0.63
NPAS3-209ENST00000551008 ITSN1Q15811 1721 aa18.97■□□□□ 0.63
NPAS3-209ENST00000551008 ATP7BP35670 1465 aa18.97■□□□□ 0.63
NPAS3-209ENST00000551008 ADAMTS2O95450 1211 aa18.96■□□□□ 0.63
NPAS3-209ENST00000551008 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
NPAS3-209ENST00000551008 CRYBG1Q9Y4K1 1723 aa18.95■□□□□ 0.62
NPAS3-209ENST00000551008 TNS3Q68CZ2 1445 aa18.94■□□□□ 0.62
NPAS3-209ENST00000551008 L3MBTL2Q969R5 705 aa18.94■□□□□ 0.62
NPAS3-209ENST00000551008 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
NPAS3-209ENST00000551008 QRICH2Q9H0J4 1663 aa18.93■□□□□ 0.62
NPAS3-209ENST00000551008 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
NPAS3-209ENST00000551008 KRT28Q7Z3Y7 464 aa18.93■□□□□ 0.62
NPAS3-209ENST00000551008 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.93■□□□□ 0.62
NPAS3-209ENST00000551008 RGS12O14924 1447 aa18.91■□□□□ 0.62
NPAS3-209ENST00000551008 PMFBP1Q8TBY8 1022 aa18.91■□□□□ 0.62
NPAS3-209ENST00000551008 SBNO1A3KN83 1393 aa18.91■□□□□ 0.62
NPAS3-209ENST00000551008 BCL9LQ86UU0 1499 aa18.9■□□□□ 0.62
NPAS3-209ENST00000551008 FNBP4Q8N3X1 1017 aaPredicted RBP18.9■□□□□ 0.62
NPAS3-209ENST00000551008 PLCH1Q4KWH8 1693 aa18.89■□□□□ 0.61
NPAS3-209ENST00000551008 NGLY1Q96IV0 654 aa18.89■□□□□ 0.61
NPAS3-209ENST00000551008 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.61
NPAS3-209ENST00000551008 ATRNO75882 1429 aa18.89■□□□□ 0.61
NPAS3-209ENST00000551008 SLIT2O94813 1529 aa18.87■□□□□ 0.61
NPAS3-209ENST00000551008 RXRBP28702 533 aa18.87■□□□□ 0.61
NPAS3-209ENST00000551008 QTRT2Q9H974 415 aaKnown RBP18.86■□□□□ 0.61
NPAS3-209ENST00000551008 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
NPAS3-209ENST00000551008 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
NPAS3-209ENST00000551008 NWD2Q9ULI1 1742 aa18.85■□□□□ 0.61
NPAS3-209ENST00000551008 NRAPQ86VF7 1730 aa18.84■□□□□ 0.61
NPAS3-209ENST00000551008 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
NPAS3-209ENST00000551008 USP21Q9UK80 565 aa18.84■□□□□ 0.61
NPAS3-209ENST00000551008 GLI3P10071 1580 aa18.84■□□□□ 0.61
NPAS3-209ENST00000551008 PHRF1Q9P1Y6 1649 aaKnown RBP18.83■□□□□ 0.61
NPAS3-209ENST00000551008 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.6
NPAS3-209ENST00000551008 PSME1Q06323 249 aa18.83■□□□□ 0.6
NPAS3-209ENST00000551008 NBPF8Q3BBV2 869 aa18.83■□□□□ 0.6
NPAS3-209ENST00000551008 CDK19Q9BWU1 502 aa18.83■□□□□ 0.6
NPAS3-209ENST00000551008 ARHGEF10O15013 1369 aa18.82■□□□□ 0.6
NPAS3-209ENST00000551008 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
NPAS3-209ENST00000551008 POLR3AO14802 1390 aaPredicted RBP18.81■□□□□ 0.6
NPAS3-209ENST00000551008 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
NPAS3-209ENST00000551008 GPRASP1Q5JY77 1395 aa18.8■□□□□ 0.6
NPAS3-209ENST00000551008 TRPC5Q9UL62 973 aaPredicted RBP18.79■□□□□ 0.6
NPAS3-209ENST00000551008 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
NPAS3-209ENST00000551008 UPF1Q92900 1129 aaKnown RBP eCLIP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms