RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 DCAF11Q8TEB1 546 aa17.33■□□□□ 0.36
ERBB3-216ENST00000550869 CDK12Q9NYV4 1490 aaPredicted RBP17.32■□□□□ 0.36
ERBB3-216ENST00000550869 NBPF8Q3BBV2 869 aa17.32■□□□□ 0.36
ERBB3-216ENST00000550869 MYOM2P54296 1465 aa17.31■□□□□ 0.36
ERBB3-216ENST00000550869 C1orf167Q5SNV9 1468 aa17.31■□□□□ 0.36
ERBB3-216ENST00000550869 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
ERBB3-216ENST00000550869 ROBO2Q9HCK4 1378 aa17.29■□□□□ 0.36
ERBB3-216ENST00000550869 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
ERBB3-216ENST00000550869 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
ERBB3-216ENST00000550869 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
ERBB3-216ENST00000550869 RXRBP28702 533 aa17.28■□□□□ 0.36
ERBB3-216ENST00000550869 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
ERBB3-216ENST00000550869 KDM2AQ9Y2K7 1162 aa17.27■□□□□ 0.36
ERBB3-216ENST00000550869 CDC42BPGQ6DT37 1551 aa17.27■□□□□ 0.35
ERBB3-216ENST00000550869 AFF2P51816 1311 aa17.26■□□□□ 0.35
ERBB3-216ENST00000550869 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
ERBB3-216ENST00000550869 SOS2Q07890 1332 aaPredicted RBP17.24■□□□□ 0.35
ERBB3-216ENST00000550869 TECPR2O15040 1411 aa17.23■□□□□ 0.35
ERBB3-216ENST00000550869 COL22A1Q8NFW1 1626 aaPredicted RBP17.23■□□□□ 0.35
ERBB3-216ENST00000550869 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
ERBB3-216ENST00000550869 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
ERBB3-216ENST00000550869 KIAA1210Q9ULL0 1709 aa17.22■□□□□ 0.35
ERBB3-216ENST00000550869 DDX17Q92841 729 aaKnown RBP17.22■□□□□ 0.35
ERBB3-216ENST00000550869 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
ERBB3-216ENST00000550869 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
ERBB3-216ENST00000550869 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
ERBB3-216ENST00000550869 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.35
ERBB3-216ENST00000550869 GPRASP1Q5JY77 1395 aa17.2■□□□□ 0.34
ERBB3-216ENST00000550869 ORAI2Q96SN7 254 aa17.2■□□□□ 0.34
ERBB3-216ENST00000550869 RBM6P78332 1123 aaKnown RBP17.19■□□□□ 0.34
ERBB3-216ENST00000550869 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
ERBB3-216ENST00000550869 NPHP3Q7Z494 1330 aa17.19■□□□□ 0.34
ERBB3-216ENST00000550869 QTRT2Q9H974 415 aaKnown RBP17.18■□□□□ 0.34
ERBB3-216ENST00000550869 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
ERBB3-216ENST00000550869 ABCC11Q96J66 1382 aa17.17■□□□□ 0.34
ERBB3-216ENST00000550869 NGLY1Q96IV0 654 aa17.17■□□□□ 0.34
ERBB3-216ENST00000550869 RGS12O14924 1447 aa17.16■□□□□ 0.34
ERBB3-216ENST00000550869 NBPF1Q3BBV0 1214 aa17.16■□□□□ 0.34
ERBB3-216ENST00000550869 PXDNQ92626 1479 aa17.16■□□□□ 0.34
ERBB3-216ENST00000550869 MARF1Q9Y4F3 1742 aaKnown RBP17.16■□□□□ 0.34
ERBB3-216ENST00000550869 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
ERBB3-216ENST00000550869 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
ERBB3-216ENST00000550869 KIF1AQ12756 1690 aa17.14■□□□□ 0.33
ERBB3-216ENST00000550869 FMN2Q9NZ56 1722 aa17.14■□□□□ 0.33
ERBB3-216ENST00000550869 ESCO1Q5FWF5 840 aa17.14■□□□□ 0.33
ERBB3-216ENST00000550869 FNBP4Q8N3X1 1017 aaPredicted RBP17.13■□□□□ 0.33
ERBB3-216ENST00000550869 ROCK2O75116 1388 aaKnown RBP17.13■□□□□ 0.33
ERBB3-216ENST00000550869 ADGRB1O14514 1584 aa17.12■□□□□ 0.33
ERBB3-216ENST00000550869 USP21Q9UK80 565 aa17.12■□□□□ 0.33
ERBB3-216ENST00000550869 TRPC5Q9UL62 973 aaPredicted RBP17.12■□□□□ 0.33
ERBB3-216ENST00000550869 YTHDC2Q9H6S0 1430 aaKnown RBP17.12■□□□□ 0.33
ERBB3-216ENST00000550869 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
ERBB3-216ENST00000550869 STK26Q9P289 416 aa17.1■□□□□ 0.33
ERBB3-216ENST00000550869 EP400Q96L91 3159 aa17.1■□□□□ 0.33
ERBB3-216ENST00000550869 WAPLQ7Z5K2 1190 aa17.09■□□□□ 0.33
ERBB3-216ENST00000550869 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
ERBB3-216ENST00000550869 ATRNO75882 1429 aa17.09■□□□□ 0.33
ERBB3-216ENST00000550869 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.09■□□□□ 0.33
ERBB3-216ENST00000550869 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
ERBB3-216ENST00000550869 FOXO3O43524 673 aa17.08■□□□□ 0.32
ERBB3-216ENST00000550869 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
ERBB3-216ENST00000550869 EIF4G2P78344 907 aaKnown RBP eCLIP17.07■□□□□ 0.32
ERBB3-216ENST00000550869 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
ERBB3-216ENST00000550869 USP47Q96K76 1375 aa17.06■□□□□ 0.32
ERBB3-216ENST00000550869 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
ERBB3-216ENST00000550869 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
ERBB3-216ENST00000550869 SPATA31A3Q5VYP0 1347 aa17.04■□□□□ 0.32
ERBB3-216ENST00000550869 DLC1Q96QB1 1528 aa17.04■□□□□ 0.32
ERBB3-216ENST00000550869 RGPD8O14715 1765 aaPredicted RBP17.03■□□□□ 0.32
ERBB3-216ENST00000550869 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
ERBB3-216ENST00000550869 NUTM2FA1L443 756 aa17.02■□□□□ 0.32
ERBB3-216ENST00000550869 XPCQ01831 940 aaPredicted RBP17.02■□□□□ 0.32
ERBB3-216ENST00000550869 ADGRB2O60241 1585 aa17.02■□□□□ 0.31
ERBB3-216ENST00000550869 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
ERBB3-216ENST00000550869 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
ERBB3-216ENST00000550869 SLIT2O94813 1529 aa17.01■□□□□ 0.31
ERBB3-216ENST00000550869 PSME1Q06323 249 aa17■□□□□ 0.31
ERBB3-216ENST00000550869 SRCAPQ6ZRS2 3230 aa17■□□□□ 0.31
ERBB3-216ENST00000550869 ANKARQ7Z5J8 1434 aa16.99■□□□□ 0.31
ERBB3-216ENST00000550869 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
ERBB3-216ENST00000550869 KRT28Q7Z3Y7 464 aa16.99■□□□□ 0.31
ERBB3-216ENST00000550869 PHF8Q9UPP1 1060 aa16.99■□□□□ 0.31
ERBB3-216ENST00000550869 SBNO1A3KN83 1393 aa16.99■□□□□ 0.31
ERBB3-216ENST00000550869 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
ERBB3-216ENST00000550869 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
ERBB3-216ENST00000550869 GJD4Q96KN9 370 aaPredicted RBP16.98■□□□□ 0.31
ERBB3-216ENST00000550869 TESK2Q96S53 571 aa16.98■□□□□ 0.31
ERBB3-216ENST00000550869 ABCA3Q99758 1704 aa16.98■□□□□ 0.31
ERBB3-216ENST00000550869 ARHGEF28Q8N1W1 1705 aaKnown RBP16.97■□□□□ 0.31
ERBB3-216ENST00000550869 UNC5CLQ8IV45 518 aa16.97■□□□□ 0.31
ERBB3-216ENST00000550869 PRAM1Q96QH2 718 aa16.97■□□□□ 0.31
ERBB3-216ENST00000550869 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
ERBB3-216ENST00000550869 HIRIP3Q9BW71 556 aaPredicted RBP16.96■□□□□ 0.31
ERBB3-216ENST00000550869 TRAK1Q9UPV9 953 aa16.96■□□□□ 0.31
ERBB3-216ENST00000550869 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.31
ERBB3-216ENST00000550869 SBNO2Q9Y2G9 1366 aa16.96■□□□□ 0.31
ERBB3-216ENST00000550869 PLCH1Q4KWH8 1693 aa16.95■□□□□ 0.3
ERBB3-216ENST00000550869 GLI3P10071 1580 aa16.95■□□□□ 0.3
ERBB3-216ENST00000550869 POGKQ9P215 609 aa16.95■□□□□ 0.3
ERBB3-216ENST00000550869 HAP1P54257 671 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms