RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
ERBB3-215ENST00000550828 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
ERBB3-215ENST00000550828 USP47Q96K76 1375 aa19.19■□□□□ 0.66
ERBB3-215ENST00000550828 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
ERBB3-215ENST00000550828 RBM33Q96EV2 1170 aaKnown RBP19.16■□□□□ 0.66
ERBB3-215ENST00000550828 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
ERBB3-215ENST00000550828 ADGRB2O60241 1585 aa19.15■□□□□ 0.66
ERBB3-215ENST00000550828 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
ERBB3-215ENST00000550828 TULP4Q9NRJ4 1543 aa19.12■□□□□ 0.65
ERBB3-215ENST00000550828 TMEM94Q12767 1356 aa19.12■□□□□ 0.65
ERBB3-215ENST00000550828 CENPJQ9HC77 1338 aaPredicted RBP19.11■□□□□ 0.65
ERBB3-215ENST00000550828 HSPA5P11021 654 aaKnown RBP19.11■□□□□ 0.65
ERBB3-215ENST00000550828 SAFB2Q14151 953 aaKnown RBP eCLIP19.11■□□□□ 0.65
ERBB3-215ENST00000550828 PROSER2Q86WR7 435 aaPredicted RBP19.11■□□□□ 0.65
ERBB3-215ENST00000550828 ADGRL3Q9HAR2 1447 aa19.1■□□□□ 0.65
ERBB3-215ENST00000550828 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
ERBB3-215ENST00000550828 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
ERBB3-215ENST00000550828 RGPD8O14715 1765 aaPredicted RBP19.1■□□□□ 0.65
ERBB3-215ENST00000550828 FMN2Q9NZ56 1722 aa19.1■□□□□ 0.65
ERBB3-215ENST00000550828 CDC42BPGQ6DT37 1551 aa19.1■□□□□ 0.65
ERBB3-215ENST00000550828 TESK2Q96S53 571 aa19.09■□□□□ 0.65
ERBB3-215ENST00000550828 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
ERBB3-215ENST00000550828 USP32Q8NFA0 1604 aa19.07■□□□□ 0.64
ERBB3-215ENST00000550828 SBNO2Q9Y2G9 1366 aa19.07■□□□□ 0.64
ERBB3-215ENST00000550828 MINK1Q8N4C8 1332 aaPredicted RBP19.07■□□□□ 0.64
ERBB3-215ENST00000550828 EIF4G2P78344 907 aaKnown RBP eCLIP19.07■□□□□ 0.64
ERBB3-215ENST00000550828 POGKQ9P215 609 aa19.07■□□□□ 0.64
ERBB3-215ENST00000550828 NCOA3Q9Y6Q9 1424 aa19.07■□□□□ 0.64
ERBB3-215ENST00000550828 TOPAZ1Q8N9V7 1692 aa19.03■□□□□ 0.64
ERBB3-215ENST00000550828 MYOM1P52179 1685 aa19.01■□□□□ 0.63
ERBB3-215ENST00000550828 DCCP43146 1447 aa19■□□□□ 0.63
ERBB3-215ENST00000550828 C11orf95C9JLR9 678 aaPredicted RBP18.99■□□□□ 0.63
ERBB3-215ENST00000550828 ITSN1Q15811 1721 aa18.99■□□□□ 0.63
ERBB3-215ENST00000550828 ATP7BP35670 1465 aa18.98■□□□□ 0.63
ERBB3-215ENST00000550828 MSH6P52701 1360 aa18.98■□□□□ 0.63
ERBB3-215ENST00000550828 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
ERBB3-215ENST00000550828 MST1RQ04912 1400 aa18.98■□□□□ 0.63
ERBB3-215ENST00000550828 WASLO00401 505 aaPredicted RBP18.97■□□□□ 0.63
ERBB3-215ENST00000550828 C19orf44Q9H6X5 657 aa18.97■□□□□ 0.63
ERBB3-215ENST00000550828 PRR36Q9H6K5 1346 aa18.97■□□□□ 0.63
ERBB3-215ENST00000550828 CDK19Q9BWU1 502 aa18.95■□□□□ 0.62
ERBB3-215ENST00000550828 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
ERBB3-215ENST00000550828 C1orf167Q5SNV9 1468 aa18.93■□□□□ 0.62
ERBB3-215ENST00000550828 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
ERBB3-215ENST00000550828 ANKARQ7Z5J8 1434 aa18.92■□□□□ 0.62
ERBB3-215ENST00000550828 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
ERBB3-215ENST00000550828 NUTM2FA1L443 756 aa18.92■□□□□ 0.62
ERBB3-215ENST00000550828 RGS17Q9UGC6 210 aaPredicted RBP18.92■□□□□ 0.62
ERBB3-215ENST00000550828 TMF1P82094 1093 aa18.91■□□□□ 0.62
ERBB3-215ENST00000550828 ATF3P18847 181 aa18.9■□□□□ 0.62
ERBB3-215ENST00000550828 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
ERBB3-215ENST00000550828 KIF1AQ12756 1690 aa18.89■□□□□ 0.61
ERBB3-215ENST00000550828 ROBO1Q9Y6N7 1651 aa18.89■□□□□ 0.61
ERBB3-215ENST00000550828 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
ERBB3-215ENST00000550828 WASHC2AQ641Q2 1341 aa18.89■□□□□ 0.61
ERBB3-215ENST00000550828 CCDC7Q96M83 1385 aa18.89■□□□□ 0.61
ERBB3-215ENST00000550828 SRPK2P78362 688 aaKnown RBP18.88■□□□□ 0.61
ERBB3-215ENST00000550828 NUDT16Q96DE0 195 aaKnown RBP18.88■□□□□ 0.61
ERBB3-215ENST00000550828 NHSL1Q5SYE7 1610 aa18.87■□□□□ 0.61
ERBB3-215ENST00000550828 MON2Q7Z3U7 1717 aa18.87■□□□□ 0.61
ERBB3-215ENST00000550828 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
ERBB3-215ENST00000550828 PPIP5K1Q6PFW1 1433 aa18.85■□□□□ 0.61
ERBB3-215ENST00000550828 ATAD2Q6PL18 1390 aa18.85■□□□□ 0.61
ERBB3-215ENST00000550828 PUS7Q96PZ0 661 aaKnown RBP18.85■□□□□ 0.61
ERBB3-215ENST00000550828 ORAI2Q96SN7 254 aa18.85■□□□□ 0.61
ERBB3-215ENST00000550828 SLAIN2Q9P270 581 aa18.84■□□□□ 0.61
ERBB3-215ENST00000550828 NRKQ7Z2Y5 1582 aa18.84■□□□□ 0.61
ERBB3-215ENST00000550828 TRPM3Q9HCF6 1732 aaPredicted RBP18.83■□□□□ 0.61
ERBB3-215ENST00000550828 SLC24A1O60721 1099 aa18.83■□□□□ 0.6
ERBB3-215ENST00000550828 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
ERBB3-215ENST00000550828 CCDC61Q9Y6R9 512 aa18.82■□□□□ 0.6
ERBB3-215ENST00000550828 POLR3GLQ9BT43 218 aa18.81■□□□□ 0.6
ERBB3-215ENST00000550828 SLC12A5Q9H2X9 1139 aa18.81■□□□□ 0.6
ERBB3-215ENST00000550828 POTEAQ6S8J7 498 aa18.8■□□□□ 0.6
ERBB3-215ENST00000550828 CABP1Q9NZU7 370 aa18.8■□□□□ 0.6
ERBB3-215ENST00000550828 POLR3AO14802 1390 aaPredicted RBP18.8■□□□□ 0.6
ERBB3-215ENST00000550828 AHDC1Q5TGY3 1603 aaPredicted RBP18.79■□□□□ 0.6
ERBB3-215ENST00000550828 PLEKHG3A1L390 1219 aa18.79■□□□□ 0.6
ERBB3-215ENST00000550828 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
ERBB3-215ENST00000550828 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
ERBB3-215ENST00000550828 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
ERBB3-215ENST00000550828 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
ERBB3-215ENST00000550828 PHF8Q9UPP1 1060 aa18.79■□□□□ 0.6
ERBB3-215ENST00000550828 CPSF1Q10570 1443 aaKnown RBP18.79■□□□□ 0.6
ERBB3-215ENST00000550828 DDX17Q92841 729 aaKnown RBP18.78■□□□□ 0.6
ERBB3-215ENST00000550828 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
ERBB3-215ENST00000550828 PXDNQ92626 1479 aa18.77■□□□□ 0.6
ERBB3-215ENST00000550828 PHLPP1O60346 1717 aa18.77■□□□□ 0.6
ERBB3-215ENST00000550828 A0A1W2PP64 1363 aa18.77■□□□□ 0.6
ERBB3-215ENST00000550828 ACEP12821 1306 aa18.76■□□□□ 0.59
ERBB3-215ENST00000550828 COL16A1Q07092 1604 aaPredicted RBP18.76■□□□□ 0.59
ERBB3-215ENST00000550828 TMC1Q8TDI8 760 aa18.76■□□□□ 0.59
ERBB3-215ENST00000550828 MARF1Q9Y4F3 1742 aaKnown RBP18.76■□□□□ 0.59
ERBB3-215ENST00000550828 ALS2Q96Q42 1657 aa18.76■□□□□ 0.59
ERBB3-215ENST00000550828 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
ERBB3-215ENST00000550828 ANKRD36BQ8N2N9 1353 aa18.74■□□□□ 0.59
ERBB3-215ENST00000550828 USP6P35125 1406 aa18.74■□□□□ 0.59
ERBB3-215ENST00000550828 SSH2Q76I76 1423 aa18.74■□□□□ 0.59
ERBB3-215ENST00000550828 PIK3C2AO00443 1686 aa18.73■□□□□ 0.59
ERBB3-215ENST00000550828 FOXO3O43524 673 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms