RNA–Protein interactions for RNA: ENST00000550555.1

PAN2-216, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

TSL 4

Gene PAN2, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-216ENST00000550555 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
PAN2-216ENST00000550555 PLEKHH1Q9ULM0 1364 aa17.68■□□□□ 0.42
PAN2-216ENST00000550555 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
PAN2-216ENST00000550555 FMN2Q9NZ56 1722 aa17.68■□□□□ 0.42
PAN2-216ENST00000550555 MEX3CQ5U5Q3 659 aaKnown RBP17.66■□□□□ 0.42
PAN2-216ENST00000550555 ZNF772Q68DY9 489 aaPredicted RBP17.66■□□□□ 0.42
PAN2-216ENST00000550555 PXDNQ92626 1479 aa17.66■□□□□ 0.42
PAN2-216ENST00000550555 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
PAN2-216ENST00000550555 C14orf93Q9H972 538 aaKnown RBP17.65■□□□□ 0.42
PAN2-216ENST00000550555 ADGRB1O14514 1584 aa17.65■□□□□ 0.42
PAN2-216ENST00000550555 WAPLQ7Z5K2 1190 aa17.64■□□□□ 0.41
PAN2-216ENST00000550555 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
PAN2-216ENST00000550555 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
PAN2-216ENST00000550555 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
PAN2-216ENST00000550555 STK26Q9P289 416 aa17.63■□□□□ 0.41
PAN2-216ENST00000550555 CDK12Q9NYV4 1490 aaPredicted RBP17.63■□□□□ 0.41
PAN2-216ENST00000550555 DLC1Q96QB1 1528 aa17.62■□□□□ 0.41
PAN2-216ENST00000550555 KIF1AQ12756 1690 aa17.62■□□□□ 0.41
PAN2-216ENST00000550555 SIRT1Q96EB6 747 aa17.62■□□□□ 0.41
PAN2-216ENST00000550555 HRCP23327 699 aa17.61■□□□□ 0.41
PAN2-216ENST00000550555 AFF2P51816 1311 aa17.61■□□□□ 0.41
PAN2-216ENST00000550555 ADGRB2O60241 1585 aa17.6■□□□□ 0.41
PAN2-216ENST00000550555 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
PAN2-216ENST00000550555 CFAP70Q5T0N1 1121 aa17.59■□□□□ 0.41
PAN2-216ENST00000550555 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.41
PAN2-216ENST00000550555 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.41
PAN2-216ENST00000550555 DHX57Q6P158 1386 aaKnown RBP17.57■□□□□ 0.4
PAN2-216ENST00000550555 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
PAN2-216ENST00000550555 C8orf37Q96NL8 207 aa17.56■□□□□ 0.4
PAN2-216ENST00000550555 USP32Q8NFA0 1604 aa17.56■□□□□ 0.4
PAN2-216ENST00000550555 RGS12O14924 1447 aa17.55■□□□□ 0.4
PAN2-216ENST00000550555 FOXO3O43524 673 aa17.54■□□□□ 0.4
PAN2-216ENST00000550555 RXRBP28702 533 aa17.54■□□□□ 0.4
PAN2-216ENST00000550555 NUTM2FA1L443 756 aa17.53■□□□□ 0.4
PAN2-216ENST00000550555 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
PAN2-216ENST00000550555 PRAM1Q96QH2 718 aa17.52■□□□□ 0.4
PAN2-216ENST00000550555 XPCQ01831 940 aaPredicted RBP17.51■□□□□ 0.39
PAN2-216ENST00000550555 ANKARQ7Z5J8 1434 aa17.51■□□□□ 0.39
PAN2-216ENST00000550555 ARHGEF28Q8N1W1 1705 aaKnown RBP17.51■□□□□ 0.39
PAN2-216ENST00000550555 ABCA3Q99758 1704 aa17.5■□□□□ 0.39
PAN2-216ENST00000550555 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
PAN2-216ENST00000550555 ATRNO75882 1429 aa17.5■□□□□ 0.39
PAN2-216ENST00000550555 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
PAN2-216ENST00000550555 SPATA31A3Q5VYP0 1347 aa17.49■□□□□ 0.39
PAN2-216ENST00000550555 STAC3Q96MF2 364 aa17.49■□□□□ 0.39
PAN2-216ENST00000550555 TNS3Q68CZ2 1445 aa17.48■□□□□ 0.39
PAN2-216ENST00000550555 TRPM3Q9HCF6 1732 aaPredicted RBP17.48■□□□□ 0.39
PAN2-216ENST00000550555 RBM6P78332 1123 aaKnown RBP17.48■□□□□ 0.39
PAN2-216ENST00000550555 UPF1Q92900 1129 aaKnown RBP eCLIP17.48■□□□□ 0.39
PAN2-216ENST00000550555 NGLY1Q96IV0 654 aa17.48■□□□□ 0.39
PAN2-216ENST00000550555 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
PAN2-216ENST00000550555 BCL9LQ86UU0 1499 aa17.48■□□□□ 0.39
PAN2-216ENST00000550555 TULP4Q9NRJ4 1543 aa17.47■□□□□ 0.39
PAN2-216ENST00000550555 KIAA1210Q9ULL0 1709 aa17.47■□□□□ 0.39
PAN2-216ENST00000550555 DCAF11Q8TEB1 546 aa17.47■□□□□ 0.39
PAN2-216ENST00000550555 SAFB2Q14151 953 aaKnown RBP eCLIP17.46■□□□□ 0.39
PAN2-216ENST00000550555 PHF8Q9UPP1 1060 aa17.46■□□□□ 0.39
PAN2-216ENST00000550555 SBNO1A3KN83 1393 aa17.45■□□□□ 0.38
PAN2-216ENST00000550555 USP21Q9UK80 565 aa17.45■□□□□ 0.38
PAN2-216ENST00000550555 SLIT2O94813 1529 aa17.45■□□□□ 0.38
PAN2-216ENST00000550555 TRAK1Q9UPV9 953 aa17.44■□□□□ 0.38
PAN2-216ENST00000550555 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
PAN2-216ENST00000550555 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
PAN2-216ENST00000550555 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
PAN2-216ENST00000550555 POGKQ9P215 609 aa17.43■□□□□ 0.38
PAN2-216ENST00000550555 TRPC5Q9UL62 973 aaPredicted RBP17.43■□□□□ 0.38
PAN2-216ENST00000550555 EP400Q96L91 3159 aa17.43■□□□□ 0.38
PAN2-216ENST00000550555 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
PAN2-216ENST00000550555 EIF3AQ14152 1382 aaKnown RBP17.42■□□□□ 0.38
PAN2-216ENST00000550555 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
PAN2-216ENST00000550555 ATP7BP35670 1465 aa17.41■□□□□ 0.38
PAN2-216ENST00000550555 ITSN1Q15811 1721 aa17.41■□□□□ 0.38
PAN2-216ENST00000550555 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
PAN2-216ENST00000550555 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
PAN2-216ENST00000550555 GLI3P10071 1580 aa17.4■□□□□ 0.38
PAN2-216ENST00000550555 TOPAZ1Q8N9V7 1692 aa17.4■□□□□ 0.38
PAN2-216ENST00000550555 HIRIP3Q9BW71 556 aaPredicted RBP17.4■□□□□ 0.38
PAN2-216ENST00000550555 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
PAN2-216ENST00000550555 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
PAN2-216ENST00000550555 WASLO00401 505 aaPredicted RBP17.38■□□□□ 0.37
PAN2-216ENST00000550555 PSME1Q06323 249 aa17.38■□□□□ 0.37
PAN2-216ENST00000550555 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
PAN2-216ENST00000550555 NRAPQ86VF7 1730 aa17.36■□□□□ 0.37
PAN2-216ENST00000550555 PMFBP1Q8TBY8 1022 aa17.36■□□□□ 0.37
PAN2-216ENST00000550555 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
PAN2-216ENST00000550555 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
PAN2-216ENST00000550555 CABLES1Q8TDN4 633 aa17.34■□□□□ 0.37
PAN2-216ENST00000550555 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
PAN2-216ENST00000550555 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
PAN2-216ENST00000550555 BRWD3Q6RI45 1802 aa17.31■□□□□ 0.36
PAN2-216ENST00000550555 COL14A1Q05707 1796 aaKnown RBP17.3■□□□□ 0.36
PAN2-216ENST00000550555 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
PAN2-216ENST00000550555 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
PAN2-216ENST00000550555 POLR3AO14802 1390 aaPredicted RBP17.29■□□□□ 0.36
PAN2-216ENST00000550555 TRPM1Q7Z4N2 1603 aa17.29■□□□□ 0.36
PAN2-216ENST00000550555 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
PAN2-216ENST00000550555 VPS72Q15906 364 aa17.28■□□□□ 0.36
PAN2-216ENST00000550555 NUDT16Q96DE0 195 aaKnown RBP17.28■□□□□ 0.36
PAN2-216ENST00000550555 FAM83GA6ND36 823 aa17.27■□□□□ 0.36
PAN2-216ENST00000550555 LMOD2Q6P5Q4 547 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms