RNA–Protein interactions for RNA: ENST00000550551.5

MTA1-217, Transcript of metastasis associated 1, humanhuman

TSL 3

Gene MTA1, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-217ENST00000550551 CDK12Q9NYV4 1490 aaPredicted RBP30.34■■■□□ 2.45
MTA1-217ENST00000550551 UPF1Q92900 1129 aaKnown RBP eCLIP30.34■■■□□ 2.45
MTA1-217ENST00000550551 CDC42BPGQ6DT37 1551 aa30.33■■■□□ 2.45
MTA1-217ENST00000550551 LRPPRCP42704 1394 aaKnown RBP30.33■■■□□ 2.45
MTA1-217ENST00000550551 ESCO1Q5FWF5 840 aa30.33■■■□□ 2.45
MTA1-217ENST00000550551 WAPLQ7Z5K2 1190 aa30.33■■■□□ 2.45
MTA1-217ENST00000550551 QTRT2Q9H974 415 aaKnown RBP30.33■■■□□ 2.45
MTA1-217ENST00000550551 ACIN1Q9UKV3 1341 aaKnown RBP30.32■■■□□ 2.44
MTA1-217ENST00000550551 NGLY1Q96IV0 654 aa30.32■■■□□ 2.44
MTA1-217ENST00000550551 TECPR2O15040 1411 aa30.31■■■□□ 2.44
MTA1-217ENST00000550551 TMEM132EQ6IEE7 984 aa30.31■■■□□ 2.44
MTA1-217ENST00000550551 PIK3C2GO75747 1445 aa30.3■■■□□ 2.44
MTA1-217ENST00000550551 ABCC11Q96J66 1382 aa30.29■■■□□ 2.44
MTA1-217ENST00000550551 NPHP3Q7Z494 1330 aa30.28■■■□□ 2.44
MTA1-217ENST00000550551 RBM6P78332 1123 aaKnown RBP30.28■■■□□ 2.44
MTA1-217ENST00000550551 KNDC1Q76NI1 1749 aa30.27■■■□□ 2.44
MTA1-217ENST00000550551 NUTM2FA1L443 756 aa30.25■■■□□ 2.43
MTA1-217ENST00000550551 PLEKHH1Q9ULM0 1364 aa30.25■■■□□ 2.43
MTA1-217ENST00000550551 FOXO3O43524 673 aa30.24■■■□□ 2.43
MTA1-217ENST00000550551 YTHDC2Q9H6S0 1430 aaKnown RBP30.23■■■□□ 2.43
MTA1-217ENST00000550551 COL22A1Q8NFW1 1626 aaPredicted RBP30.23■■■□□ 2.43
MTA1-217ENST00000550551 RGS12O14924 1447 aa30.22■■■□□ 2.43
MTA1-217ENST00000550551 PXDNQ92626 1479 aa30.21■■■□□ 2.43
MTA1-217ENST00000550551 XPCQ01831 940 aaPredicted RBP30.21■■■□□ 2.43
MTA1-217ENST00000550551 USP21Q9UK80 565 aa30.21■■■□□ 2.43
MTA1-217ENST00000550551 C14orf93Q9H972 538 aaKnown RBP30.2■■■□□ 2.43
MTA1-217ENST00000550551 SIRT1Q96EB6 747 aa30.18■■■□□ 2.42
MTA1-217ENST00000550551 FMN2Q9NZ56 1722 aa30.17■■■□□ 2.42
MTA1-217ENST00000550551 FNBP4Q8N3X1 1017 aaPredicted RBP30.17■■■□□ 2.42
MTA1-217ENST00000550551 MYOM2P54296 1465 aa30.17■■■□□ 2.42
MTA1-217ENST00000550551 RAB3GAP2Q9H2M9 1393 aa30.16■■■□□ 2.42
MTA1-217ENST00000550551 CFAP70Q5T0N1 1121 aa30.16■■■□□ 2.42
MTA1-217ENST00000550551 TRPC5Q9UL62 973 aaPredicted RBP30.16■■■□□ 2.42
MTA1-217ENST00000550551 NRXN1Q9ULB1 1477 aa30.15■■■□□ 2.42
MTA1-217ENST00000550551 DHX57Q6P158 1386 aaKnown RBP30.15■■■□□ 2.42
MTA1-217ENST00000550551 KIF1AQ12756 1690 aa30.1■■■□□ 2.41
MTA1-217ENST00000550551 MARF1Q9Y4F3 1742 aaKnown RBP30.1■■■□□ 2.41
MTA1-217ENST00000550551 ATRNO75882 1429 aa30.09■■■□□ 2.41
MTA1-217ENST00000550551 SPATA31A3Q5VYP0 1347 aa30.07■■■□□ 2.4
MTA1-217ENST00000550551 KRT28Q7Z3Y7 464 aa30.07■■■□□ 2.4
MTA1-217ENST00000550551 RGPD8O14715 1765 aaPredicted RBP30.07■■■□□ 2.4
MTA1-217ENST00000550551 SAFB2Q14151 953 aaKnown RBP eCLIP30.06■■■□□ 2.4
MTA1-217ENST00000550551 PRAM1Q96QH2 718 aa30.06■■■□□ 2.4
MTA1-217ENST00000550551 PHF8Q9UPP1 1060 aa30.04■■■□□ 2.4
MTA1-217ENST00000550551 BCL9LQ86UU0 1499 aa30.04■■■□□ 2.4
MTA1-217ENST00000550551 POGKQ9P215 609 aa30.03■■■□□ 2.4
MTA1-217ENST00000550551 ATAD2Q6PL18 1390 aa30.02■■■□□ 2.4
MTA1-217ENST00000550551 PSME1Q06323 249 aa30.01■■■□□ 2.39
MTA1-217ENST00000550551 DLC1Q96QB1 1528 aa30■■■□□ 2.39
MTA1-217ENST00000550551 KDM2AQ9Y2K7 1162 aa29.98■■■□□ 2.39
MTA1-217ENST00000550551 GJD4Q96KN9 370 aaPredicted RBP29.97■■■□□ 2.39
MTA1-217ENST00000550551 DCAF11Q8TEB1 546 aa29.96■■■□□ 2.39
MTA1-217ENST00000550551 TRAK1Q9UPV9 953 aa29.96■■■□□ 2.39
MTA1-217ENST00000550551 TNS3Q68CZ2 1445 aa29.96■■■□□ 2.39
MTA1-217ENST00000550551 ADGRB1O14514 1584 aa29.95■■■□□ 2.39
MTA1-217ENST00000550551 UNC5CLQ8IV45 518 aa29.95■■■□□ 2.39
MTA1-217ENST00000550551 HAP1P54257 671 aaPredicted RBP29.94■■■□□ 2.38
MTA1-217ENST00000550551 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.93■■■□□ 2.38
MTA1-217ENST00000550551 USP32Q8NFA0 1604 aa29.93■■■□□ 2.38
MTA1-217ENST00000550551 SBNO1A3KN83 1393 aa29.92■■■□□ 2.38
MTA1-217ENST00000550551 SLIT2O94813 1529 aa29.92■■■□□ 2.38
MTA1-217ENST00000550551 HRCP23327 699 aa29.92■■■□□ 2.38
MTA1-217ENST00000550551 LMOD2Q6P5Q4 547 aa29.92■■■□□ 2.38
MTA1-217ENST00000550551 ANKARQ7Z5J8 1434 aa29.92■■■□□ 2.38
MTA1-217ENST00000550551 PMFBP1Q8TBY8 1022 aa29.92■■■□□ 2.38
MTA1-217ENST00000550551 PLEKHG5O94827 1062 aa29.91■■■□□ 2.38
MTA1-217ENST00000550551 CABLES1Q8TDN4 633 aa29.91■■■□□ 2.38
MTA1-217ENST00000550551 ADGRB2O60241 1585 aa29.9■■■□□ 2.38
MTA1-217ENST00000550551 STAC3Q96MF2 364 aa29.9■■■□□ 2.38
MTA1-217ENST00000550551 HIRIP3Q9BW71 556 aaPredicted RBP29.9■■■□□ 2.38
MTA1-217ENST00000550551 MINK1Q8N4C8 1332 aaPredicted RBP29.88■■■□□ 2.37
MTA1-217ENST00000550551 EP400Q96L91 3159 aa29.88■■■□□ 2.37
MTA1-217ENST00000550551 ARHGEF10O15013 1369 aa29.88■■■□□ 2.37
MTA1-217ENST00000550551 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
MTA1-217ENST00000550551 EIF3AQ14152 1382 aaKnown RBP29.84■■■□□ 2.37
MTA1-217ENST00000550551 GLI3P10071 1580 aa29.84■■■□□ 2.37
MTA1-217ENST00000550551 ABCA3Q99758 1704 aa29.82■■■□□ 2.36
MTA1-217ENST00000550551 CCDC125Q86Z20 511 aa29.82■■■□□ 2.36
MTA1-217ENST00000550551 PRR36Q9H6K5 1346 aa29.81■■■□□ 2.36
MTA1-217ENST00000550551 WASLO00401 505 aaPredicted RBP29.81■■■□□ 2.36
MTA1-217ENST00000550551 PLCH1Q4KWH8 1693 aa29.8■■■□□ 2.36
MTA1-217ENST00000550551 GPRASP1Q5JY77 1395 aa29.79■■■□□ 2.36
MTA1-217ENST00000550551 VPS72Q15906 364 aa29.79■■■□□ 2.36
MTA1-217ENST00000550551 TULP4Q9NRJ4 1543 aa29.79■■■□□ 2.36
MTA1-217ENST00000550551 TRPM3Q9HCF6 1732 aaPredicted RBP29.79■■■□□ 2.36
MTA1-217ENST00000550551 NWD2Q9ULI1 1742 aa29.79■■■□□ 2.36
MTA1-217ENST00000550551 FAM83GA6ND36 823 aa29.77■■■□□ 2.36
MTA1-217ENST00000550551 CCDC9Q9Y3X0 531 aaKnown RBP29.76■■■□□ 2.35
MTA1-217ENST00000550551 BRWD3Q6RI45 1802 aa29.75■■■□□ 2.35
MTA1-217ENST00000550551 ARHGEF28Q8N1W1 1705 aaKnown RBP29.74■■■□□ 2.35
MTA1-217ENST00000550551 SEPT12Q8IYM1 358 aa29.74■■■□□ 2.35
MTA1-217ENST00000550551 NGDNQ8NEJ9 315 aaKnown RBP29.74■■■□□ 2.35
MTA1-217ENST00000550551 ALS2Q96Q42 1657 aa29.73■■■□□ 2.35
MTA1-217ENST00000550551 ZRANB1Q9UGI0 708 aa29.71■■■□□ 2.35
MTA1-217ENST00000550551 ONECUT3O60422 494 aaPredicted RBP29.7■■■□□ 2.35
MTA1-217ENST00000550551 PAK3O75914 559 aaPredicted RBP29.69■■■□□ 2.34
MTA1-217ENST00000550551 NUDT16Q96DE0 195 aaKnown RBP29.68■■■□□ 2.34
MTA1-217ENST00000550551 BTG4Q9NY30 223 aa29.67■■■□□ 2.34
MTA1-217ENST00000550551 BLMP54132 1417 aaPredicted RBP29.67■■■□□ 2.34
MTA1-217ENST00000550551 ITSN1Q15811 1721 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms