RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ADAMTS2O95450 1211 aa34.31■■■■□ 3.08
SMARCD1-209ENST00000550477 ADGRF5Q8IZF2 1346 aa34.3■■■■□ 3.08
SMARCD1-209ENST00000550477 ESCO1Q5FWF5 840 aa34.3■■■■□ 3.08
SMARCD1-209ENST00000550477 NPHP3Q7Z494 1330 aa34.29■■■■□ 3.08
SMARCD1-209ENST00000550477 STK26Q9P289 416 aa34.28■■■■□ 3.08
SMARCD1-209ENST00000550477 LAMC1P11047 1609 aa34.28■■■■□ 3.08
SMARCD1-209ENST00000550477 LRPPRCP42704 1394 aaKnown RBP34.24■■■■□ 3.07
SMARCD1-209ENST00000550477 SPATA31E1Q6ZUB1 1445 aa34.22■■■■□ 3.07
SMARCD1-209ENST00000550477 CDC42BPGQ6DT37 1551 aa34.21■■■■□ 3.07
SMARCD1-209ENST00000550477 USP21Q9UK80 565 aa34.21■■■■□ 3.07
SMARCD1-209ENST00000550477 ABCC11Q96J66 1382 aa34.21■■■■□ 3.07
SMARCD1-209ENST00000550477 WAPLQ7Z5K2 1190 aa34.2■■■■□ 3.07
SMARCD1-209ENST00000550477 TRPC5Q9UL62 973 aaPredicted RBP34.18■■■■□ 3.06
SMARCD1-209ENST00000550477 TECPR2O15040 1411 aa34.18■■■■□ 3.06
SMARCD1-209ENST00000550477 FOXO3O43524 673 aa34.17■■■■□ 3.06
SMARCD1-209ENST00000550477 TMEM132EQ6IEE7 984 aa34.17■■■■□ 3.06
SMARCD1-209ENST00000550477 NUTM2FA1L443 756 aa34.13■■■■□ 3.05
SMARCD1-209ENST00000550477 FNBP4Q8N3X1 1017 aaPredicted RBP34.13■■■■□ 3.05
SMARCD1-209ENST00000550477 IFT172Q9UG01 1749 aa34.13■■■■□ 3.05
SMARCD1-209ENST00000550477 PIK3C2GO75747 1445 aa34.13■■■■□ 3.05
SMARCD1-209ENST00000550477 SIRT1Q96EB6 747 aa34.12■■■■□ 3.05
SMARCD1-209ENST00000550477 RGS12O14924 1447 aa34.11■■■■□ 3.05
SMARCD1-209ENST00000550477 YTHDC2Q9H6S0 1430 aaKnown RBP34.1■■■■□ 3.05
SMARCD1-209ENST00000550477 COL22A1Q8NFW1 1626 aaPredicted RBP34.09■■■■□ 3.05
SMARCD1-209ENST00000550477 C14orf93Q9H972 538 aaKnown RBP34.09■■■■□ 3.05
SMARCD1-209ENST00000550477 DHX57Q6P158 1386 aaKnown RBP34.09■■■■□ 3.05
SMARCD1-209ENST00000550477 XPCQ01831 940 aaPredicted RBP34.08■■■■□ 3.05
SMARCD1-209ENST00000550477 KNDC1Q76NI1 1749 aa34.07■■■■□ 3.05
SMARCD1-209ENST00000550477 PXDNQ92626 1479 aa34.05■■■■□ 3.04
SMARCD1-209ENST00000550477 PLEKHH1Q9ULM0 1364 aa34.04■■■■□ 3.04
SMARCD1-209ENST00000550477 ATAD2Q6PL18 1390 aa34.03■■■■□ 3.04
SMARCD1-209ENST00000550477 MYOM2P54296 1465 aa34.02■■■■□ 3.04
SMARCD1-209ENST00000550477 PSME1Q06323 249 aa34.01■■■■□ 3.03
SMARCD1-209ENST00000550477 CFAP70Q5T0N1 1121 aa33.99■■■■□ 3.03
SMARCD1-209ENST00000550477 KRT28Q7Z3Y7 464 aa33.99■■■■□ 3.03
SMARCD1-209ENST00000550477 ATRNO75882 1429 aa33.98■■■■□ 3.03
SMARCD1-209ENST00000550477 KIF1AQ12756 1690 aa33.97■■■■□ 3.03
SMARCD1-209ENST00000550477 FMN2Q9NZ56 1722 aa33.97■■■■□ 3.03
SMARCD1-209ENST00000550477 SPATA31A3Q5VYP0 1347 aa33.97■■■■□ 3.03
SMARCD1-209ENST00000550477 HAP1P54257 671 aaPredicted RBP33.96■■■■□ 3.03
SMARCD1-209ENST00000550477 POGKQ9P215 609 aa33.96■■■■□ 3.03
SMARCD1-209ENST00000550477 PHF8Q9UPP1 1060 aa33.96■■■■□ 3.03
SMARCD1-209ENST00000550477 NRXN1Q9ULB1 1477 aa33.94■■■■□ 3.02
SMARCD1-209ENST00000550477 MARF1Q9Y4F3 1742 aaKnown RBP33.93■■■■□ 3.02
SMARCD1-209ENST00000550477 PRAM1Q96QH2 718 aa33.93■■■■□ 3.02
SMARCD1-209ENST00000550477 GJD4Q96KN9 370 aaPredicted RBP33.92■■■■□ 3.02
SMARCD1-209ENST00000550477 RAB3GAP2Q9H2M9 1393 aa33.92■■■■□ 3.02
SMARCD1-209ENST00000550477 BCL9LQ86UU0 1499 aa33.91■■■■□ 3.02
SMARCD1-209ENST00000550477 SAFB2Q14151 953 aaKnown RBP eCLIP33.91■■■■□ 3.02
SMARCD1-209ENST00000550477 UNC5CLQ8IV45 518 aa33.89■■■■□ 3.02
SMARCD1-209ENST00000550477 CCDC125Q86Z20 511 aa33.88■■■■□ 3.01
SMARCD1-209ENST00000550477 STAC3Q96MF2 364 aa33.87■■■■□ 3.01
SMARCD1-209ENST00000550477 LMOD2Q6P5Q4 547 aa33.85■■■■□ 3.01
SMARCD1-209ENST00000550477 TNS3Q68CZ2 1445 aa33.83■■■■□ 3.01
SMARCD1-209ENST00000550477 KDM2AQ9Y2K7 1162 aa33.82■■■■□ 3
SMARCD1-209ENST00000550477 DLC1Q96QB1 1528 aa33.82■■■■□ 3
SMARCD1-209ENST00000550477 RGPD8O14715 1765 aaPredicted RBP33.82■■■■□ 3
SMARCD1-209ENST00000550477 SBNO1A3KN83 1393 aa33.82■■■■□ 3
SMARCD1-209ENST00000550477 ARHGEF10O15013 1369 aa33.82■■■■□ 3
SMARCD1-209ENST00000550477 DCAF11Q8TEB1 546 aa33.81■■■■□ 3
SMARCD1-209ENST00000550477 TRAK1Q9UPV9 953 aa33.8■■■■□ 3
SMARCD1-209ENST00000550477 EIF3AQ14152 1382 aaKnown RBP33.79■■■■□ 3
SMARCD1-209ENST00000550477 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.79■■■■□ 3
SMARCD1-209ENST00000550477 ANKARQ7Z5J8 1434 aa33.79■■■■□ 3
SMARCD1-209ENST00000550477 SLIT2O94813 1529 aa33.78■■■■□ 3
SMARCD1-209ENST00000550477 PMFBP1Q8TBY8 1022 aa33.77■■■■□ 3
SMARCD1-209ENST00000550477 PLEKHG5O94827 1062 aa33.76■■■□□ 2.99
SMARCD1-209ENST00000550477 HRCP23327 699 aa33.76■■■□□ 2.99
SMARCD1-209ENST00000550477 USP32Q8NFA0 1604 aa33.75■■■□□ 2.99
SMARCD1-209ENST00000550477 CABLES1Q8TDN4 633 aa33.75■■■□□ 2.99
SMARCD1-209ENST00000550477 ZRANB1Q9UGI0 708 aa33.74■■■□□ 2.99
SMARCD1-209ENST00000550477 GPRASP1Q5JY77 1395 aa33.73■■■□□ 2.99
SMARCD1-209ENST00000550477 CCDC9Q9Y3X0 531 aaKnown RBP33.73■■■□□ 2.99
SMARCD1-209ENST00000550477 RALGAPBQ86X10 1494 aa33.72■■■□□ 2.99
SMARCD1-209ENST00000550477 HIRIP3Q9BW71 556 aaPredicted RBP33.72■■■□□ 2.99
SMARCD1-209ENST00000550477 VPS72Q15906 364 aa33.71■■■□□ 2.99
SMARCD1-209ENST00000550477 MINK1Q8N4C8 1332 aaPredicted RBP33.71■■■□□ 2.99
SMARCD1-209ENST00000550477 ADGRB1O14514 1584 aa33.68■■■□□ 2.98
SMARCD1-209ENST00000550477 ADGRB2O60241 1585 aa33.68■■■□□ 2.98
SMARCD1-209ENST00000550477 WASLO00401 505 aaPredicted RBP33.67■■■□□ 2.98
SMARCD1-209ENST00000550477 SF3B2Q13435 895 aaKnown RBP33.66■■■□□ 2.98
SMARCD1-209ENST00000550477 SEPT12Q8IYM1 358 aa33.65■■■□□ 2.98
SMARCD1-209ENST00000550477 NGDNQ8NEJ9 315 aaKnown RBP33.65■■■□□ 2.98
SMARCD1-209ENST00000550477 GLI3P10071 1580 aa33.64■■■□□ 2.98
SMARCD1-209ENST00000550477 NWD2Q9ULI1 1742 aa33.62■■■□□ 2.97
SMARCD1-209ENST00000550477 FAM83GA6ND36 823 aa33.62■■■□□ 2.97
SMARCD1-209ENST00000550477 BLMP54132 1417 aaPredicted RBP33.61■■■□□ 2.97
SMARCD1-209ENST00000550477 TULP4Q9NRJ4 1543 aa33.59■■■□□ 2.97
SMARCD1-209ENST00000550477 ONECUT3O60422 494 aaPredicted RBP33.59■■■□□ 2.97
SMARCD1-209ENST00000550477 PAK3O75914 559 aaPredicted RBP33.59■■■□□ 2.97
SMARCD1-209ENST00000550477 A0A0G2JS52 829 aa33.58■■■□□ 2.97
SMARCD1-209ENST00000550477 MYT1Q01538 1121 aa33.58■■■□□ 2.97
SMARCD1-209ENST00000550477 PLCH1Q4KWH8 1693 aa33.58■■■□□ 2.97
SMARCD1-209ENST00000550477 KRT27Q7Z3Y8 459 aa33.56■■■□□ 2.96
SMARCD1-209ENST00000550477 PRR36Q9H6K5 1346 aa33.55■■■□□ 2.96
SMARCD1-209ENST00000550477 BTG4Q9NY30 223 aa33.55■■■□□ 2.96
SMARCD1-209ENST00000550477 ABCA3Q99758 1704 aa33.54■■■□□ 2.96
SMARCD1-209ENST00000550477 BRWD3Q6RI45 1802 aa33.51■■■□□ 2.96
SMARCD1-209ENST00000550477 TRPM3Q9HCF6 1732 aaPredicted RBP33.51■■■□□ 2.96
SMARCD1-209ENST00000550477 NUDT16Q96DE0 195 aaKnown RBP33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms