RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 YTHDC2Q9H6S0 1430 aaKnown RBP29.22■■■□□ 2.27
GCN1-207ENST00000550471 ZNF772Q68DY9 489 aaPredicted RBP29.22■■■□□ 2.27
GCN1-207ENST00000550471 STK26Q9P289 416 aa29.22■■■□□ 2.27
GCN1-207ENST00000550471 TMEM132EQ6IEE7 984 aa29.18■■■□□ 2.26
GCN1-207ENST00000550471 SOS2Q07890 1332 aaPredicted RBP29.17■■■□□ 2.26
GCN1-207ENST00000550471 POTEAQ6S8J7 498 aa29.16■■■□□ 2.26
GCN1-207ENST00000550471 NPHP3Q7Z494 1330 aa29.16■■■□□ 2.26
GCN1-207ENST00000550471 ORAI2Q96SN7 254 aa29.15■■■□□ 2.26
GCN1-207ENST00000550471 LRP6O75581 1613 aa29.15■■■□□ 2.26
GCN1-207ENST00000550471 CFAP70Q5T0N1 1121 aa29.14■■■□□ 2.26
GCN1-207ENST00000550471 WAPLQ7Z5K2 1190 aa29.14■■■□□ 2.26
GCN1-207ENST00000550471 ESCO1Q5FWF5 840 aa29.13■■■□□ 2.25
GCN1-207ENST00000550471 PNPLA6Q8IY17 1366 aa29.13■■■□□ 2.25
GCN1-207ENST00000550471 NUTM2BA6NNL0 878 aaPredicted RBP29.1■■■□□ 2.25
GCN1-207ENST00000550471 NUTM2EB1AL46 878 aaPredicted RBP29.1■■■□□ 2.25
GCN1-207ENST00000550471 NUTM2AQ8IVF1 878 aaPredicted RBP29.1■■■□□ 2.25
GCN1-207ENST00000550471 DCAF11Q8TEB1 546 aa29.09■■■□□ 2.25
GCN1-207ENST00000550471 DLC1Q96QB1 1528 aa29.09■■■□□ 2.25
GCN1-207ENST00000550471 DDX17Q92841 729 aaKnown RBP29.08■■■□□ 2.25
GCN1-207ENST00000550471 PLEKHH1Q9ULM0 1364 aa29.05■■■□□ 2.24
GCN1-207ENST00000550471 POGKQ9P215 609 aa29.04■■■□□ 2.24
GCN1-207ENST00000550471 PRAM1Q96QH2 718 aa29.02■■■□□ 2.24
GCN1-207ENST00000550471 KDM2AQ9Y2K7 1162 aa29.02■■■□□ 2.24
GCN1-207ENST00000550471 FMN2Q9NZ56 1722 aa29■■■□□ 2.23
GCN1-207ENST00000550471 KIF1AQ12756 1690 aa29■■■□□ 2.23
GCN1-207ENST00000550471 FOXO3O43524 673 aa29■■■□□ 2.23
GCN1-207ENST00000550471 ADGRB1O14514 1584 aa29■■■□□ 2.23
GCN1-207ENST00000550471 EIF3AQ14152 1382 aaKnown RBP29■■■□□ 2.23
GCN1-207ENST00000550471 AFF2P51816 1311 aa28.99■■■□□ 2.23
GCN1-207ENST00000550471 RXRBP28702 533 aa28.99■■■□□ 2.23
GCN1-207ENST00000550471 PXDNQ92626 1479 aa28.97■■■□□ 2.23
GCN1-207ENST00000550471 ANKARQ7Z5J8 1434 aa28.96■■■□□ 2.23
GCN1-207ENST00000550471 COL22A1Q8NFW1 1626 aaPredicted RBP28.96■■■□□ 2.23
GCN1-207ENST00000550471 PSME1Q06323 249 aa28.96■■■□□ 2.23
GCN1-207ENST00000550471 C8orf37Q96NL8 207 aa28.96■■■□□ 2.23
GCN1-207ENST00000550471 CDK12Q9NYV4 1490 aaPredicted RBP28.96■■■□□ 2.23
GCN1-207ENST00000550471 NGLY1Q96IV0 654 aa28.95■■■□□ 2.22
GCN1-207ENST00000550471 NUTM2FA1L443 756 aa28.94■■■□□ 2.22
GCN1-207ENST00000550471 PHF8Q9UPP1 1060 aa28.93■■■□□ 2.22
GCN1-207ENST00000550471 TRAK1Q9UPV9 953 aa28.93■■■□□ 2.22
GCN1-207ENST00000550471 ADGRB2O60241 1585 aa28.92■■■□□ 2.22
GCN1-207ENST00000550471 ADAMTS2O95450 1211 aa28.9■■■□□ 2.22
GCN1-207ENST00000550471 SAFB2Q14151 953 aaKnown RBP eCLIP28.9■■■□□ 2.22
GCN1-207ENST00000550471 RBM6P78332 1123 aaKnown RBP28.89■■■□□ 2.22
GCN1-207ENST00000550471 KRT28Q7Z3Y7 464 aa28.89■■■□□ 2.22
GCN1-207ENST00000550471 SPATA31A3Q5VYP0 1347 aa28.89■■■□□ 2.21
GCN1-207ENST00000550471 QTRT2Q9H974 415 aaKnown RBP28.88■■■□□ 2.21
GCN1-207ENST00000550471 FNBP4Q8N3X1 1017 aaPredicted RBP28.87■■■□□ 2.21
GCN1-207ENST00000550471 SBNO1A3KN83 1393 aa28.86■■■□□ 2.21
GCN1-207ENST00000550471 KIAA1210Q9ULL0 1709 aa28.84■■■□□ 2.21
GCN1-207ENST00000550471 XPCQ01831 940 aaPredicted RBP28.84■■■□□ 2.21
GCN1-207ENST00000550471 USP21Q9UK80 565 aa28.84■■■□□ 2.21
GCN1-207ENST00000550471 TRPC5Q9UL62 973 aaPredicted RBP28.84■■■□□ 2.21
GCN1-207ENST00000550471 WASLO00401 505 aaPredicted RBP28.83■■■□□ 2.21
GCN1-207ENST00000550471 ARHGEF10O15013 1369 aa28.82■■■□□ 2.2
GCN1-207ENST00000550471 TNS3Q68CZ2 1445 aa28.81■■■□□ 2.2
GCN1-207ENST00000550471 MINK1Q8N4C8 1332 aaPredicted RBP28.8■■■□□ 2.2
GCN1-207ENST00000550471 TULP4Q9NRJ4 1543 aa28.79■■■□□ 2.2
GCN1-207ENST00000550471 GPRASP1Q5JY77 1395 aa28.79■■■□□ 2.2
GCN1-207ENST00000550471 HIRIP3Q9BW71 556 aaPredicted RBP28.77■■■□□ 2.2
GCN1-207ENST00000550471 RGPD8O14715 1765 aaPredicted RBP28.75■■■□□ 2.19
GCN1-207ENST00000550471 HAP1P54257 671 aaPredicted RBP28.75■■■□□ 2.19
GCN1-207ENST00000550471 ARHGEF28Q8N1W1 1705 aaKnown RBP28.74■■■□□ 2.19
GCN1-207ENST00000550471 PMFBP1Q8TBY8 1022 aa28.73■■■□□ 2.19
GCN1-207ENST00000550471 MARF1Q9Y4F3 1742 aaKnown RBP28.73■■■□□ 2.19
GCN1-207ENST00000550471 USP32Q8NFA0 1604 aa28.72■■■□□ 2.19
GCN1-207ENST00000550471 ATRNO75882 1429 aa28.72■■■□□ 2.19
GCN1-207ENST00000550471 NGDNQ8NEJ9 315 aaKnown RBP28.7■■■□□ 2.18
GCN1-207ENST00000550471 PRR36Q9H6K5 1346 aa28.69■■■□□ 2.18
GCN1-207ENST00000550471 BCL9LQ86UU0 1499 aa28.68■■■□□ 2.18
GCN1-207ENST00000550471 LMOD2Q6P5Q4 547 aa28.68■■■□□ 2.18
GCN1-207ENST00000550471 UPF1Q92900 1129 aaKnown RBP eCLIP28.68■■■□□ 2.18
GCN1-207ENST00000550471 RGS12O14924 1447 aa28.68■■■□□ 2.18
GCN1-207ENST00000550471 UNC5CLQ8IV45 518 aa28.67■■■□□ 2.18
GCN1-207ENST00000550471 L3MBTL2Q969R5 705 aa28.67■■■□□ 2.18
GCN1-207ENST00000550471 NUDT16Q96DE0 195 aaKnown RBP28.67■■■□□ 2.18
GCN1-207ENST00000550471 ITSN1Q15811 1721 aa28.66■■■□□ 2.18
GCN1-207ENST00000550471 SLIT2O94813 1529 aa28.65■■■□□ 2.18
GCN1-207ENST00000550471 CDK19Q9BWU1 502 aa28.65■■■□□ 2.18
GCN1-207ENST00000550471 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.64■■■□□ 2.18
GCN1-207ENST00000550471 NBPF1Q3BBV0 1214 aa28.64■■■□□ 2.18
GCN1-207ENST00000550471 GJD4Q96KN9 370 aaPredicted RBP28.64■■■□□ 2.18
GCN1-207ENST00000550471 CCDC61Q9Y6R9 512 aa28.64■■■□□ 2.18
GCN1-207ENST00000550471 CENPJQ9HC77 1338 aaPredicted RBP28.64■■■□□ 2.17
GCN1-207ENST00000550471 ATP7BP35670 1465 aa28.63■■■□□ 2.17
GCN1-207ENST00000550471 ATAD2Q6PL18 1390 aa28.62■■■□□ 2.17
GCN1-207ENST00000550471 PLEKHG3A1L390 1219 aa28.59■■■□□ 2.17
GCN1-207ENST00000550471 TRPM3Q9HCF6 1732 aaPredicted RBP28.59■■■□□ 2.17
GCN1-207ENST00000550471 NEUROD1Q13562 356 aa28.57■■■□□ 2.16
GCN1-207ENST00000550471 CABLES1Q8TDN4 633 aa28.57■■■□□ 2.16
GCN1-207ENST00000550471 SIN3AQ96ST3 1273 aa28.57■■■□□ 2.16
GCN1-207ENST00000550471 POLR3AO14802 1390 aaPredicted RBP28.57■■■□□ 2.16
GCN1-207ENST00000550471 PAK3O75914 559 aaPredicted RBP28.56■■■□□ 2.16
GCN1-207ENST00000550471 NWD2Q9ULI1 1742 aa28.55■■■□□ 2.16
GCN1-207ENST00000550471 ALS2Q96Q42 1657 aa28.55■■■□□ 2.16
GCN1-207ENST00000550471 BRD4O60885 1362 aaPredicted RBP28.55■■■□□ 2.16
GCN1-207ENST00000550471 VPS72Q15906 364 aa28.55■■■□□ 2.16
GCN1-207ENST00000550471 SRPK2P78362 688 aaKnown RBP28.54■■■□□ 2.16
GCN1-207ENST00000550471 TRIM26Q12899 539 aaPredicted RBP28.53■■■□□ 2.16
GCN1-207ENST00000550471 ABCA3Q99758 1704 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms