RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 C11orf95C9JLR9 678 aaPredicted RBP10.71□□□□□ -0.69
RNF41-208ENST00000550379 ATAD2Q6PL18 1390 aa10.71□□□□□ -0.69
RNF41-208ENST00000550379 ADGRL3Q9HAR2 1447 aa10.71□□□□□ -0.69
RNF41-208ENST00000550379 TULP4Q9NRJ4 1543 aa10.71□□□□□ -0.69
RNF41-208ENST00000550379 POGKQ9P215 609 aa10.71□□□□□ -0.69
RNF41-208ENST00000550379 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.71□□□□□ -0.69
RNF41-208ENST00000550379 CDC42BPGQ6DT37 1551 aa10.7□□□□□ -0.7
RNF41-208ENST00000550379 ANKARQ7Z5J8 1434 aa10.7□□□□□ -0.7
RNF41-208ENST00000550379 DISP3Q9P2K9 1392 aa10.7□□□□□ -0.7
RNF41-208ENST00000550379 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
RNF41-208ENST00000550379 STRCP1A6NGW2 1772 aa10.7□□□□□ -0.7
RNF41-208ENST00000550379 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
RNF41-208ENST00000550379 STK26Q9P289 416 aa10.69□□□□□ -0.7
RNF41-208ENST00000550379 NPC1L1Q9UHC9 1359 aa10.68□□□□□ -0.7
RNF41-208ENST00000550379 WAPLQ7Z5K2 1190 aa10.68□□□□□ -0.7
RNF41-208ENST00000550379 C19orf44Q9H6X5 657 aa10.68□□□□□ -0.7
RNF41-208ENST00000550379 BRD4O60885 1362 aaPredicted RBP10.67□□□□□ -0.7
RNF41-208ENST00000550379 LTBP4Q8N2S1 1624 aa10.67□□□□□ -0.7
RNF41-208ENST00000550379 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
RNF41-208ENST00000550379 LRRC7Q96NW7 1537 aa10.67□□□□□ -0.7
RNF41-208ENST00000550379 IQSEC2Q5JU85 1478 aa10.67□□□□□ -0.7
RNF41-208ENST00000550379 PLEKHG3A1L390 1219 aa10.66□□□□□ -0.7
RNF41-208ENST00000550379 PER1O15534 1290 aaPredicted RBP10.66□□□□□ -0.7
RNF41-208ENST00000550379 CDK19Q9BWU1 502 aa10.66□□□□□ -0.7
RNF41-208ENST00000550379 AEBP2Q6ZN18 517 aaPredicted RBP10.65□□□□□ -0.7
RNF41-208ENST00000550379 ATP7BP35670 1465 aa10.65□□□□□ -0.7
RNF41-208ENST00000550379 CPSF1Q10570 1443 aaKnown RBP10.65□□□□□ -0.7
RNF41-208ENST00000550379 TMEM94Q12767 1356 aa10.65□□□□□ -0.71
RNF41-208ENST00000550379 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
RNF41-208ENST00000550379 FMN2Q9NZ56 1722 aa10.64□□□□□ -0.71
RNF41-208ENST00000550379 MYOM1P52179 1685 aa10.64□□□□□ -0.71
RNF41-208ENST00000550379 XIRP1Q702N8 1843 aaKnown RBP10.64□□□□□ -0.71
RNF41-208ENST00000550379 PROSER2Q86WR7 435 aaPredicted RBP10.64□□□□□ -0.71
RNF41-208ENST00000550379 ZNF692Q9BU19 519 aaPredicted RBP10.64□□□□□ -0.71
RNF41-208ENST00000550379 POLR3AO14802 1390 aaPredicted RBP10.64□□□□□ -0.71
RNF41-208ENST00000550379 KTN1Q86UP2 1357 aaKnown RBP10.64□□□□□ -0.71
RNF41-208ENST00000550379 ANKRD36BQ8N2N9 1353 aa10.64□□□□□ -0.71
RNF41-208ENST00000550379 TOPAZ1Q8N9V7 1692 aa10.63□□□□□ -0.71
RNF41-208ENST00000550379 MINK1Q8N4C8 1332 aaPredicted RBP10.63□□□□□ -0.71
RNF41-208ENST00000550379 CADPS2Q86UW7 1296 aa10.63□□□□□ -0.71
RNF41-208ENST00000550379 HIRIP3Q9BW71 556 aaPredicted RBP10.63□□□□□ -0.71
RNF41-208ENST00000550379 ITSN1Q15811 1721 aa10.63□□□□□ -0.71
RNF41-208ENST00000550379 ZNF335Q9H4Z2 1342 aaPredicted RBP10.62□□□□□ -0.71
RNF41-208ENST00000550379 NUDT16Q96DE0 195 aaKnown RBP10.62□□□□□ -0.71
RNF41-208ENST00000550379 USP32Q8NFA0 1604 aa10.62□□□□□ -0.71
RNF41-208ENST00000550379 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
RNF41-208ENST00000550379 TERF2IPQ9NYB0 399 aa10.61□□□□□ -0.71
RNF41-208ENST00000550379 MSH6P52701 1360 aa10.61□□□□□ -0.71
RNF41-208ENST00000550379 PRR36Q9H6K5 1346 aa10.6□□□□□ -0.71
RNF41-208ENST00000550379 MST1RQ04912 1400 aa10.6□□□□□ -0.71
RNF41-208ENST00000550379 SRPK2P78362 688 aaKnown RBP10.6□□□□□ -0.71
RNF41-208ENST00000550379 SSH2Q76I76 1423 aa10.59□□□□□ -0.71
RNF41-208ENST00000550379 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
RNF41-208ENST00000550379 NSD2O96028 1365 aa10.59□□□□□ -0.71
RNF41-208ENST00000550379 AKAP12Q02952 1782 aa10.58□□□□□ -0.72
RNF41-208ENST00000550379 C1orf167Q5SNV9 1468 aa10.58□□□□□ -0.72
RNF41-208ENST00000550379 DDX10Q13206 875 aaKnown RBP10.58□□□□□ -0.72
RNF41-208ENST00000550379 SAFB2Q14151 953 aaKnown RBP eCLIP10.58□□□□□ -0.72
RNF41-208ENST00000550379 SLC12A5Q9H2X9 1139 aa10.58□□□□□ -0.72
RNF41-208ENST00000550379 EDC4Q6P2E9 1401 aaKnown RBP10.58□□□□□ -0.72
RNF41-208ENST00000550379 PPIP5K1Q6PFW1 1433 aa10.58□□□□□ -0.72
RNF41-208ENST00000550379 KIF1AQ12756 1690 aa10.57□□□□□ -0.72
RNF41-208ENST00000550379 ATF3P18847 181 aa10.57□□□□□ -0.72
RNF41-208ENST00000550379 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
RNF41-208ENST00000550379 PANK3Q9H999 370 aa10.57□□□□□ -0.72
RNF41-208ENST00000550379 CABP1Q9NZU7 370 aa10.57□□□□□ -0.72
RNF41-208ENST00000550379 MON2Q7Z3U7 1717 aa10.57□□□□□ -0.72
RNF41-208ENST00000550379 A0A1W2PP64 1363 aa10.56□□□□□ -0.72
RNF41-208ENST00000550379 DIEXFQ68CQ4 756 aaKnown RBP10.56□□□□□ -0.72
RNF41-208ENST00000550379 HDGFL2Q7Z4V5 671 aaPredicted RBP10.56□□□□□ -0.72
RNF41-208ENST00000550379 CARD14Q9BXL6 1004 aa10.56□□□□□ -0.72
RNF41-208ENST00000550379 SENP3Q9H4L4 574 aaPredicted RBP10.56□□□□□ -0.72
RNF41-208ENST00000550379 RGPD8O14715 1765 aaPredicted RBP10.55□□□□□ -0.72
RNF41-208ENST00000550379 USP54Q70EL1 1684 aa10.55□□□□□ -0.72
RNF41-208ENST00000550379 USP6P35125 1406 aa10.55□□□□□ -0.72
RNF41-208ENST00000550379 TTC21AQ8NDW8 1320 aa10.55□□□□□ -0.72
RNF41-208ENST00000550379 SCAF1Q9H7N4 1312 aaKnown RBP10.55□□□□□ -0.72
RNF41-208ENST00000550379 RALBP1Q15311 655 aa10.54□□□□□ -0.72
RNF41-208ENST00000550379 SLAIN2Q9P270 581 aa10.54□□□□□ -0.72
RNF41-208ENST00000550379 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
RNF41-208ENST00000550379 KNSTRNQ9Y448 316 aa10.54□□□□□ -0.72
RNF41-208ENST00000550379 CGNL1Q0VF96 1302 aa10.54□□□□□ -0.72
RNF41-208ENST00000550379 USP31Q70CQ4 1352 aa10.53□□□□□ -0.72
RNF41-208ENST00000550379 PARD3Q8TEW0 1356 aa10.53□□□□□ -0.72
RNF41-208ENST00000550379 NRKQ7Z2Y5 1582 aa10.53□□□□□ -0.72
RNF41-208ENST00000550379 ACEP12821 1306 aa10.53□□□□□ -0.72
RNF41-208ENST00000550379 C14orf37Q86TY3 774 aa10.52□□□□□ -0.73
RNF41-208ENST00000550379 PRKRIP1Q9H875 184 aaPredicted RBP10.52□□□□□ -0.73
RNF41-208ENST00000550379 SBNO1A3KN83 1393 aa10.52□□□□□ -0.73
RNF41-208ENST00000550379 FYB1O15117 783 aa10.51□□□□□ -0.73
RNF41-208ENST00000550379 TMC1Q8TDI8 760 aa10.51□□□□□ -0.73
RNF41-208ENST00000550379 SOS2Q07890 1332 aaPredicted RBP10.51□□□□□ -0.73
RNF41-208ENST00000550379 NPHP3Q7Z494 1330 aa10.51□□□□□ -0.73
RNF41-208ENST00000550379 NSD3Q9BZ95 1437 aa10.5□□□□□ -0.73
RNF41-208ENST00000550379 ANKRD26Q9UPS8 1709 aa10.5□□□□□ -0.73
RNF41-208ENST00000550379 CCER2I3L3R5 266 aa10.5□□□□□ -0.73
RNF41-208ENST00000550379 TTC21BQ7Z4L5 1316 aa10.5□□□□□ -0.73
RNF41-208ENST00000550379 AATKQ6ZMQ8 1374 aa10.5□□□□□ -0.73
RNF41-208ENST00000550379 ANP32CO43423 234 aa10.49□□□□□ -0.73
RNF41-208ENST00000550379 TOM1O60784 492 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms