RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 TRAK1Q9UPV9 953 aa16.26■□□□□ 0.19
RAB5B-208ENST00000550283 SAFB2Q14151 953 aaKnown RBP eCLIP16.25■□□□□ 0.19
RAB5B-208ENST00000550283 ATF3P18847 181 aa16.24■□□□□ 0.19
RAB5B-208ENST00000550283 PRAM1Q96QH2 718 aa16.24■□□□□ 0.19
RAB5B-208ENST00000550283 DCCP43146 1447 aa16.24■□□□□ 0.19
RAB5B-208ENST00000550283 BRINP3Q76B58 766 aa16.23■□□□□ 0.19
RAB5B-208ENST00000550283 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
RAB5B-208ENST00000550283 DDX17Q92841 729 aaKnown RBP16.23■□□□□ 0.19
RAB5B-208ENST00000550283 DLC1Q96QB1 1528 aa16.22■□□□□ 0.19
RAB5B-208ENST00000550283 C1orf167Q5SNV9 1468 aa16.22■□□□□ 0.19
RAB5B-208ENST00000550283 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
RAB5B-208ENST00000550283 STAC3Q96MF2 364 aa16.21■□□□□ 0.19
RAB5B-208ENST00000550283 ORAI2Q96SN7 254 aa16.21■□□□□ 0.19
RAB5B-208ENST00000550283 ARHGEF28Q8N1W1 1705 aaKnown RBP16.21■□□□□ 0.19
RAB5B-208ENST00000550283 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
RAB5B-208ENST00000550283 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.18
RAB5B-208ENST00000550283 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
RAB5B-208ENST00000550283 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
RAB5B-208ENST00000550283 HIRIP3Q9BW71 556 aaPredicted RBP16.19■□□□□ 0.18
RAB5B-208ENST00000550283 COL16A1Q07092 1604 aaPredicted RBP16.18■□□□□ 0.18
RAB5B-208ENST00000550283 MINK1Q8N4C8 1332 aaPredicted RBP16.17■□□□□ 0.18
RAB5B-208ENST00000550283 FMN2Q9NZ56 1722 aa16.16■□□□□ 0.18
RAB5B-208ENST00000550283 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
RAB5B-208ENST00000550283 PHLPP1O60346 1717 aa16.16■□□□□ 0.18
RAB5B-208ENST00000550283 AHDC1Q5TGY3 1603 aaPredicted RBP16.16■□□□□ 0.18
RAB5B-208ENST00000550283 USP32Q8NFA0 1604 aa16.16■□□□□ 0.18
RAB5B-208ENST00000550283 POGKQ9P215 609 aa16.15■□□□□ 0.18
RAB5B-208ENST00000550283 NHSL1Q5SYE7 1610 aa16.14■□□□□ 0.17
RAB5B-208ENST00000550283 PRR36Q9H6K5 1346 aa16.14■□□□□ 0.17
RAB5B-208ENST00000550283 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
RAB5B-208ENST00000550283 RGPD8O14715 1765 aaPredicted RBP16.13■□□□□ 0.17
RAB5B-208ENST00000550283 ROCK2O75116 1388 aaKnown RBP16.11■□□□□ 0.17
RAB5B-208ENST00000550283 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
RAB5B-208ENST00000550283 XPCQ01831 940 aaPredicted RBP16.1■□□□□ 0.17
RAB5B-208ENST00000550283 ESCO1Q5FWF5 840 aa16.1■□□□□ 0.17
RAB5B-208ENST00000550283 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
RAB5B-208ENST00000550283 CCER1Q8TC90 406 aaPredicted RBP16.09■□□□□ 0.17
RAB5B-208ENST00000550283 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.16
RAB5B-208ENST00000550283 FOXO3O43524 673 aa16.07■□□□□ 0.16
RAB5B-208ENST00000550283 PXDNQ92626 1479 aa16.07■□□□□ 0.16
RAB5B-208ENST00000550283 TULP4Q9NRJ4 1543 aa16.07■□□□□ 0.16
RAB5B-208ENST00000550283 LRP6O75581 1613 aa16.07■□□□□ 0.16
RAB5B-208ENST00000550283 QRICH2Q9H0J4 1663 aa16.07■□□□□ 0.16
RAB5B-208ENST00000550283 SOS2Q07890 1332 aaPredicted RBP16.06■□□□□ 0.16
RAB5B-208ENST00000550283 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
RAB5B-208ENST00000550283 ATP7BP35670 1465 aa16.05■□□□□ 0.16
RAB5B-208ENST00000550283 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
RAB5B-208ENST00000550283 PMFBP1Q8TBY8 1022 aa16.05■□□□□ 0.16
RAB5B-208ENST00000550283 CDK19Q9BWU1 502 aa16.05■□□□□ 0.16
RAB5B-208ENST00000550283 JCADQ9P266 1359 aa16.03■□□□□ 0.16
RAB5B-208ENST00000550283 CARD11Q9BXL7 1154 aa16.03■□□□□ 0.16
RAB5B-208ENST00000550283 PHF8Q9UPP1 1060 aa16.03■□□□□ 0.16
RAB5B-208ENST00000550283 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.16
RAB5B-208ENST00000550283 PNPLA6Q8IY17 1366 aa16.02■□□□□ 0.16
RAB5B-208ENST00000550283 SHPRHQ149N8 1683 aa16.02■□□□□ 0.16
RAB5B-208ENST00000550283 NUDT16Q96DE0 195 aaKnown RBP16.01■□□□□ 0.15
RAB5B-208ENST00000550283 CABP2Q9NPB3 220 aa16.01■□□□□ 0.15
RAB5B-208ENST00000550283 RGS17Q9UGC6 210 aaPredicted RBP16.01■□□□□ 0.15
RAB5B-208ENST00000550283 KIF1AQ12756 1690 aa16■□□□□ 0.15
RAB5B-208ENST00000550283 TOPAZ1Q8N9V7 1692 aa16■□□□□ 0.15
RAB5B-208ENST00000550283 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
RAB5B-208ENST00000550283 KRT28Q7Z3Y7 464 aa15.98■□□□□ 0.15
RAB5B-208ENST00000550283 NUTM2BA6NNL0 878 aaPredicted RBP15.97■□□□□ 0.15
RAB5B-208ENST00000550283 NUTM2EB1AL46 878 aaPredicted RBP15.97■□□□□ 0.15
RAB5B-208ENST00000550283 NUTM2AQ8IVF1 878 aaPredicted RBP15.97■□□□□ 0.15
RAB5B-208ENST00000550283 LRRC59Q96AG4 307 aaKnown RBP15.97■□□□□ 0.15
RAB5B-208ENST00000550283 TRPM3Q9HCF6 1732 aaPredicted RBP15.97■□□□□ 0.15
RAB5B-208ENST00000550283 TESK2Q96S53 571 aa15.96■□□□□ 0.15
RAB5B-208ENST00000550283 SPATA31A3Q5VYP0 1347 aa15.95■□□□□ 0.14
RAB5B-208ENST00000550283 ST20-MTHFSA0A0A6YYL1 179 aa15.95■□□□□ 0.14
RAB5B-208ENST00000550283 SRPK2P78362 688 aaKnown RBP15.95■□□□□ 0.14
RAB5B-208ENST00000550283 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
RAB5B-208ENST00000550283 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
RAB5B-208ENST00000550283 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
RAB5B-208ENST00000550283 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
RAB5B-208ENST00000550283 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
RAB5B-208ENST00000550283 PPIP5K1Q6PFW1 1433 aa15.93■□□□□ 0.14
RAB5B-208ENST00000550283 ACEP12821 1306 aa15.93■□□□□ 0.14
RAB5B-208ENST00000550283 USP47Q96K76 1375 aa15.92■□□□□ 0.14
RAB5B-208ENST00000550283 SBNO2Q9Y2G9 1366 aa15.92■□□□□ 0.14
RAB5B-208ENST00000550283 ITSN1Q15811 1721 aa15.92■□□□□ 0.14
RAB5B-208ENST00000550283 PLEKHG3A1L390 1219 aa15.92■□□□□ 0.14
RAB5B-208ENST00000550283 MSH5O43196 834 aa15.92■□□□□ 0.14
RAB5B-208ENST00000550283 CABLES1Q8TDN4 633 aa15.92■□□□□ 0.14
RAB5B-208ENST00000550283 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
RAB5B-208ENST00000550283 TNS3Q68CZ2 1445 aa15.92■□□□□ 0.14
RAB5B-208ENST00000550283 POLR3AO14802 1390 aaPredicted RBP15.91■□□□□ 0.14
RAB5B-208ENST00000550283 PSME1Q06323 249 aa15.91■□□□□ 0.14
RAB5B-208ENST00000550283 POTEAQ6S8J7 498 aa15.91■□□□□ 0.14
RAB5B-208ENST00000550283 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
RAB5B-208ENST00000550283 ALS2Q96Q42 1657 aa15.91■□□□□ 0.14
RAB5B-208ENST00000550283 EVC2Q86UK5 1308 aa15.91■□□□□ 0.14
RAB5B-208ENST00000550283 SBNO1A3KN83 1393 aa15.9■□□□□ 0.14
RAB5B-208ENST00000550283 ADAMTS2O95450 1211 aa15.9■□□□□ 0.14
RAB5B-208ENST00000550283 NGDNQ8NEJ9 315 aaKnown RBP15.9■□□□□ 0.14
RAB5B-208ENST00000550283 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
RAB5B-208ENST00000550283 CD163L1Q9NR16 1453 aa15.87■□□□□ 0.13
RAB5B-208ENST00000550283 CRYBG1Q9Y4K1 1723 aa15.86■□□□□ 0.13
RAB5B-208ENST00000550283 NUTM2GQ5VZR2 741 aa15.86■□□□□ 0.13
RAB5B-208ENST00000550283 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms