RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 C8orf37Q96NL8 207 aa19.83■□□□□ 0.77
NUP188-211ENST00000550219 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
NUP188-211ENST00000550219 TMEM132EQ6IEE7 984 aa19.82■□□□□ 0.76
NUP188-211ENST00000550219 LRPPRCP42704 1394 aaKnown RBP19.82■□□□□ 0.76
NUP188-211ENST00000550219 TECPR2O15040 1411 aa19.81■□□□□ 0.76
NUP188-211ENST00000550219 WAPLQ7Z5K2 1190 aa19.8■□□□□ 0.76
NUP188-211ENST00000550219 PLEKHH1Q9ULM0 1364 aa19.8■□□□□ 0.76
NUP188-211ENST00000550219 NUTM2FA1L443 756 aa19.79■□□□□ 0.76
NUP188-211ENST00000550219 ADAMTS2O95450 1211 aa19.79■□□□□ 0.76
NUP188-211ENST00000550219 ESCO1Q5FWF5 840 aa19.79■□□□□ 0.76
NUP188-211ENST00000550219 SOS2Q07890 1332 aaPredicted RBP19.78■□□□□ 0.76
NUP188-211ENST00000550219 YTHDC2Q9H6S0 1430 aaKnown RBP19.78■□□□□ 0.76
NUP188-211ENST00000550219 RXRBP28702 533 aa19.78■□□□□ 0.76
NUP188-211ENST00000550219 MYOM2P54296 1465 aa19.77■□□□□ 0.76
NUP188-211ENST00000550219 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
NUP188-211ENST00000550219 FMN2Q9NZ56 1722 aa19.76■□□□□ 0.75
NUP188-211ENST00000550219 ABCC11Q96J66 1382 aa19.75■□□□□ 0.75
NUP188-211ENST00000550219 XPCQ01831 940 aaPredicted RBP19.75■□□□□ 0.75
NUP188-211ENST00000550219 NPHP3Q7Z494 1330 aa19.75■□□□□ 0.75
NUP188-211ENST00000550219 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
NUP188-211ENST00000550219 PXDNQ92626 1479 aa19.73■□□□□ 0.75
NUP188-211ENST00000550219 NRXN1Q9ULB1 1477 aa19.73■□□□□ 0.75
NUP188-211ENST00000550219 NGLY1Q96IV0 654 aa19.73■□□□□ 0.75
NUP188-211ENST00000550219 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
NUP188-211ENST00000550219 CFAP70Q5T0N1 1121 aa19.72■□□□□ 0.75
NUP188-211ENST00000550219 RGS12O14924 1447 aa19.71■□□□□ 0.75
NUP188-211ENST00000550219 FOXO3O43524 673 aa19.71■□□□□ 0.75
NUP188-211ENST00000550219 KIF1AQ12756 1690 aa19.71■□□□□ 0.75
NUP188-211ENST00000550219 QTRT2Q9H974 415 aaKnown RBP19.7■□□□□ 0.74
NUP188-211ENST00000550219 DHX57Q6P158 1386 aaKnown RBP19.7■□□□□ 0.74
NUP188-211ENST00000550219 SAFB2Q14151 953 aaKnown RBP eCLIP19.69■□□□□ 0.74
NUP188-211ENST00000550219 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
NUP188-211ENST00000550219 UPF1Q92900 1129 aaKnown RBP eCLIP19.68■□□□□ 0.74
NUP188-211ENST00000550219 PCGF6Q9BYE7 350 aa19.68■□□□□ 0.74
NUP188-211ENST00000550219 RBM6P78332 1123 aaKnown RBP19.67■□□□□ 0.74
NUP188-211ENST00000550219 USP21Q9UK80 565 aa19.67■□□□□ 0.74
NUP188-211ENST00000550219 PRAM1Q96QH2 718 aa19.66■□□□□ 0.74
NUP188-211ENST00000550219 MARF1Q9Y4F3 1742 aaKnown RBP19.64■□□□□ 0.73
NUP188-211ENST00000550219 RGPD8O14715 1765 aaPredicted RBP19.63■□□□□ 0.73
NUP188-211ENST00000550219 ADGRB1O14514 1584 aa19.63■□□□□ 0.73
NUP188-211ENST00000550219 DLC1Q96QB1 1528 aa19.63■□□□□ 0.73
NUP188-211ENST00000550219 POGKQ9P215 609 aa19.63■□□□□ 0.73
NUP188-211ENST00000550219 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
NUP188-211ENST00000550219 SIRT1Q96EB6 747 aa19.62■□□□□ 0.73
NUP188-211ENST00000550219 PLEKHG5O94827 1062 aa19.61■□□□□ 0.73
NUP188-211ENST00000550219 TRPC5Q9UL62 973 aaPredicted RBP19.61■□□□□ 0.73
NUP188-211ENST00000550219 ATRNO75882 1429 aa19.6■□□□□ 0.73
NUP188-211ENST00000550219 DCAF11Q8TEB1 546 aa19.6■□□□□ 0.73
NUP188-211ENST00000550219 PHF8Q9UPP1 1060 aa19.6■□□□□ 0.73
NUP188-211ENST00000550219 ADGRB2O60241 1585 aa19.6■□□□□ 0.73
NUP188-211ENST00000550219 TNS3Q68CZ2 1445 aa19.59■□□□□ 0.73
NUP188-211ENST00000550219 USP32Q8NFA0 1604 aa19.59■□□□□ 0.73
NUP188-211ENST00000550219 SPATA31A3Q5VYP0 1347 aa19.59■□□□□ 0.73
NUP188-211ENST00000550219 HRCP23327 699 aa19.59■□□□□ 0.73
NUP188-211ENST00000550219 KRT28Q7Z3Y7 464 aa19.59■□□□□ 0.73
NUP188-211ENST00000550219 FNBP4Q8N3X1 1017 aaPredicted RBP19.59■□□□□ 0.73
NUP188-211ENST00000550219 TRAK1Q9UPV9 953 aa19.59■□□□□ 0.73
NUP188-211ENST00000550219 HAP1P54257 671 aaPredicted RBP19.57■□□□□ 0.72
NUP188-211ENST00000550219 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
NUP188-211ENST00000550219 MINK1Q8N4C8 1332 aaPredicted RBP19.56■□□□□ 0.72
NUP188-211ENST00000550219 BCL9LQ86UU0 1499 aa19.56■□□□□ 0.72
NUP188-211ENST00000550219 LMOD2Q6P5Q4 547 aa19.56■□□□□ 0.72
NUP188-211ENST00000550219 ANKARQ7Z5J8 1434 aa19.56■□□□□ 0.72
NUP188-211ENST00000550219 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
NUP188-211ENST00000550219 ABCA3Q99758 1704 aa19.55■□□□□ 0.72
NUP188-211ENST00000550219 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
NUP188-211ENST00000550219 PSME1Q06323 249 aa19.54■□□□□ 0.72
NUP188-211ENST00000550219 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.54■□□□□ 0.72
NUP188-211ENST00000550219 TULP4Q9NRJ4 1543 aa19.52■□□□□ 0.72
NUP188-211ENST00000550219 ARHGEF28Q8N1W1 1705 aaKnown RBP19.52■□□□□ 0.72
NUP188-211ENST00000550219 CABLES1Q8TDN4 633 aa19.52■□□□□ 0.72
NUP188-211ENST00000550219 SBNO1A3KN83 1393 aa19.51■□□□□ 0.71
NUP188-211ENST00000550219 EIF3AQ14152 1382 aaKnown RBP19.51■□□□□ 0.71
NUP188-211ENST00000550219 PLCH1Q4KWH8 1693 aa19.51■□□□□ 0.71
NUP188-211ENST00000550219 SLIT2O94813 1529 aa19.51■□□□□ 0.71
NUP188-211ENST00000550219 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
NUP188-211ENST00000550219 PRR36Q9H6K5 1346 aa19.49■□□□□ 0.71
NUP188-211ENST00000550219 GLI3P10071 1580 aa19.49■□□□□ 0.71
NUP188-211ENST00000550219 RALGAPBQ86X10 1494 aa19.48■□□□□ 0.71
NUP188-211ENST00000550219 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
NUP188-211ENST00000550219 UNC5CLQ8IV45 518 aa19.48■□□□□ 0.71
NUP188-211ENST00000550219 GJD4Q96KN9 370 aaPredicted RBP19.48■□□□□ 0.71
NUP188-211ENST00000550219 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
NUP188-211ENST00000550219 WASLO00401 505 aaPredicted RBP19.46■□□□□ 0.71
NUP188-211ENST00000550219 STAC3Q96MF2 364 aa19.46■□□□□ 0.71
NUP188-211ENST00000550219 ITSN1Q15811 1721 aa19.45■□□□□ 0.7
NUP188-211ENST00000550219 ALS2Q96Q42 1657 aa19.44■□□□□ 0.7
NUP188-211ENST00000550219 CCDC9Q9Y3X0 531 aaKnown RBP19.44■□□□□ 0.7
NUP188-211ENST00000550219 NWD2Q9ULI1 1742 aa19.44■□□□□ 0.7
NUP188-211ENST00000550219 ATP7BP35670 1465 aa19.43■□□□□ 0.7
NUP188-211ENST00000550219 NGDNQ8NEJ9 315 aaKnown RBP19.43■□□□□ 0.7
NUP188-211ENST00000550219 KIAA1210Q9ULL0 1709 aa19.42■□□□□ 0.7
NUP188-211ENST00000550219 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
NUP188-211ENST00000550219 NRAPQ86VF7 1730 aa19.4■□□□□ 0.7
NUP188-211ENST00000550219 VPS72Q15906 364 aa19.38■□□□□ 0.69
NUP188-211ENST00000550219 BRWD3Q6RI45 1802 aa19.38■□□□□ 0.69
NUP188-211ENST00000550219 TOPAZ1Q8N9V7 1692 aa19.38■□□□□ 0.69
NUP188-211ENST00000550219 CRYBG1Q9Y4K1 1723 aa19.38■□□□□ 0.69
NUP188-211ENST00000550219 COL14A1Q05707 1796 aaKnown RBP19.37■□□□□ 0.69
NUP188-211ENST00000550219 A0A0G2JS52 829 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms