RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
COX6A1-203ENST00000550009 TECPR2O15040 1411 aa23.55■■□□□ 1.36
COX6A1-203ENST00000550009 CDC42BPGQ6DT37 1551 aa23.55■■□□□ 1.36
COX6A1-203ENST00000550009 SPATA31A6Q5VVP1 1343 aa23.55■■□□□ 1.36
COX6A1-203ENST00000550009 YTHDC2Q9H6S0 1430 aaKnown RBP23.54■■□□□ 1.36
COX6A1-203ENST00000550009 MYOM2P54296 1465 aa23.53■■□□□ 1.36
COX6A1-203ENST00000550009 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
COX6A1-203ENST00000550009 PNPLA6Q8IY17 1366 aa23.52■■□□□ 1.36
COX6A1-203ENST00000550009 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
COX6A1-203ENST00000550009 C14orf93Q9H972 538 aaKnown RBP23.51■■□□□ 1.35
COX6A1-203ENST00000550009 ABCC11Q96J66 1382 aa23.51■■□□□ 1.35
COX6A1-203ENST00000550009 XPCQ01831 940 aaPredicted RBP23.48■■□□□ 1.35
COX6A1-203ENST00000550009 KDM2AQ9Y2K7 1162 aa23.48■■□□□ 1.35
COX6A1-203ENST00000550009 SAFB2Q14151 953 aaKnown RBP eCLIP23.47■■□□□ 1.35
COX6A1-203ENST00000550009 LRRC59Q96AG4 307 aaKnown RBP23.47■■□□□ 1.35
COX6A1-203ENST00000550009 SOS2Q07890 1332 aaPredicted RBP23.47■■□□□ 1.35
COX6A1-203ENST00000550009 ESCO1Q5FWF5 840 aa23.46■■□□□ 1.35
COX6A1-203ENST00000550009 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
COX6A1-203ENST00000550009 PXDNQ92626 1479 aa23.44■■□□□ 1.34
COX6A1-203ENST00000550009 DHX57Q6P158 1386 aaKnown RBP23.44■■□□□ 1.34
COX6A1-203ENST00000550009 ACIN1Q9UKV3 1341 aaKnown RBP23.44■■□□□ 1.34
COX6A1-203ENST00000550009 AFF2P51816 1311 aa23.43■■□□□ 1.34
COX6A1-203ENST00000550009 FOXO3O43524 673 aa23.42■■□□□ 1.34
COX6A1-203ENST00000550009 DCAF11Q8TEB1 546 aa23.42■■□□□ 1.34
COX6A1-203ENST00000550009 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
COX6A1-203ENST00000550009 COL22A1Q8NFW1 1626 aaPredicted RBP23.41■■□□□ 1.34
COX6A1-203ENST00000550009 ADAMTS2O95450 1211 aa23.41■■□□□ 1.34
COX6A1-203ENST00000550009 C8orf37Q96NL8 207 aa23.41■■□□□ 1.34
COX6A1-203ENST00000550009 PRAM1Q96QH2 718 aa23.41■■□□□ 1.34
COX6A1-203ENST00000550009 HRCP23327 699 aa23.4■■□□□ 1.34
COX6A1-203ENST00000550009 MARF1Q9Y4F3 1742 aaKnown RBP23.39■■□□□ 1.34
COX6A1-203ENST00000550009 TRAK1Q9UPV9 953 aa23.37■■□□□ 1.33
COX6A1-203ENST00000550009 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
COX6A1-203ENST00000550009 ZNF772Q68DY9 489 aaPredicted RBP23.36■■□□□ 1.33
COX6A1-203ENST00000550009 DLC1Q96QB1 1528 aa23.36■■□□□ 1.33
COX6A1-203ENST00000550009 KIF1AQ12756 1690 aa23.35■■□□□ 1.33
COX6A1-203ENST00000550009 HIRIP3Q9BW71 556 aaPredicted RBP23.35■■□□□ 1.33
COX6A1-203ENST00000550009 SIRT1Q96EB6 747 aa23.34■■□□□ 1.33
COX6A1-203ENST00000550009 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.33
COX6A1-203ENST00000550009 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
COX6A1-203ENST00000550009 MINK1Q8N4C8 1332 aaPredicted RBP23.31■■□□□ 1.32
COX6A1-203ENST00000550009 POGKQ9P215 609 aa23.3■■□□□ 1.32
COX6A1-203ENST00000550009 PLEKHG5O94827 1062 aa23.29■■□□□ 1.32
COX6A1-203ENST00000550009 RXRBP28702 533 aa23.29■■□□□ 1.32
COX6A1-203ENST00000550009 NGLY1Q96IV0 654 aa23.29■■□□□ 1.32
COX6A1-203ENST00000550009 QTRT2Q9H974 415 aaKnown RBP23.28■■□□□ 1.32
COX6A1-203ENST00000550009 ABCA3Q99758 1704 aa23.28■■□□□ 1.32
COX6A1-203ENST00000550009 KRT28Q7Z3Y7 464 aa23.27■■□□□ 1.32
COX6A1-203ENST00000550009 PMFBP1Q8TBY8 1022 aa23.27■■□□□ 1.32
COX6A1-203ENST00000550009 PHF8Q9UPP1 1060 aa23.27■■□□□ 1.32
COX6A1-203ENST00000550009 PRR36Q9H6K5 1346 aa23.27■■□□□ 1.32
COX6A1-203ENST00000550009 RGS12O14924 1447 aa23.25■■□□□ 1.31
COX6A1-203ENST00000550009 TRPM3Q9HCF6 1732 aaPredicted RBP23.25■■□□□ 1.31
COX6A1-203ENST00000550009 SPATA31A3Q5VYP0 1347 aa23.25■■□□□ 1.31
COX6A1-203ENST00000550009 KIAA1210Q9ULL0 1709 aa23.23■■□□□ 1.31
COX6A1-203ENST00000550009 NBPF1Q3BBV0 1214 aa23.23■■□□□ 1.31
COX6A1-203ENST00000550009 CABLES1Q8TDN4 633 aa23.23■■□□□ 1.31
COX6A1-203ENST00000550009 EP400Q96L91 3159 aa23.22■■□□□ 1.31
COX6A1-203ENST00000550009 SIN3AQ96ST3 1273 aa23.22■■□□□ 1.31
COX6A1-203ENST00000550009 USP21Q9UK80 565 aa23.22■■□□□ 1.31
COX6A1-203ENST00000550009 BCL9LQ86UU0 1499 aa23.2■■□□□ 1.3
COX6A1-203ENST00000550009 FNBP4Q8N3X1 1017 aaPredicted RBP23.2■■□□□ 1.3
COX6A1-203ENST00000550009 TULP4Q9NRJ4 1543 aa23.19■■□□□ 1.3
COX6A1-203ENST00000550009 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
COX6A1-203ENST00000550009 TNS3Q68CZ2 1445 aa23.19■■□□□ 1.3
COX6A1-203ENST00000550009 UPF1Q92900 1129 aaKnown RBP eCLIP23.19■■□□□ 1.3
COX6A1-203ENST00000550009 ALS2Q96Q42 1657 aa23.19■■□□□ 1.3
COX6A1-203ENST00000550009 ATRNO75882 1429 aa23.18■■□□□ 1.3
COX6A1-203ENST00000550009 RBM6P78332 1123 aaKnown RBP23.18■■□□□ 1.3
COX6A1-203ENST00000550009 ANKARQ7Z5J8 1434 aa23.17■■□□□ 1.3
COX6A1-203ENST00000550009 PLCH1Q4KWH8 1693 aa23.17■■□□□ 1.3
COX6A1-203ENST00000550009 WASLO00401 505 aaPredicted RBP23.17■■□□□ 1.3
COX6A1-203ENST00000550009 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.16■■□□□ 1.3
COX6A1-203ENST00000550009 PSME1Q06323 249 aa23.15■■□□□ 1.3
COX6A1-203ENST00000550009 LMOD2Q6P5Q4 547 aa23.15■■□□□ 1.3
COX6A1-203ENST00000550009 ITSN1Q15811 1721 aa23.15■■□□□ 1.3
COX6A1-203ENST00000550009 CRYBG1Q9Y4K1 1723 aa23.15■■□□□ 1.3
COX6A1-203ENST00000550009 BRWD3Q6RI45 1802 aa23.14■■□□□ 1.29
COX6A1-203ENST00000550009 TOPAZ1Q8N9V7 1692 aa23.13■■□□□ 1.29
COX6A1-203ENST00000550009 ATP7BP35670 1465 aa23.13■■□□□ 1.29
COX6A1-203ENST00000550009 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
COX6A1-203ENST00000550009 STAC3Q96MF2 364 aa23.13■■□□□ 1.29
COX6A1-203ENST00000550009 SBNO1A3KN83 1393 aa23.13■■□□□ 1.29
COX6A1-203ENST00000550009 GLI3P10071 1580 aa23.12■■□□□ 1.29
COX6A1-203ENST00000550009 TRPC5Q9UL62 973 aaPredicted RBP23.12■■□□□ 1.29
COX6A1-203ENST00000550009 NEUROD1Q13562 356 aa23.11■■□□□ 1.29
COX6A1-203ENST00000550009 QRICH2Q9H0J4 1663 aa23.11■■□□□ 1.29
COX6A1-203ENST00000550009 SLIT2O94813 1529 aa23.11■■□□□ 1.29
COX6A1-203ENST00000550009 TRPM1Q7Z4N2 1603 aa23.1■■□□□ 1.29
COX6A1-203ENST00000550009 CDK19Q9BWU1 502 aa23.09■■□□□ 1.29
COX6A1-203ENST00000550009 NUDT16Q96DE0 195 aaKnown RBP23.08■■□□□ 1.29
COX6A1-203ENST00000550009 NRAPQ86VF7 1730 aa23.07■■□□□ 1.28
COX6A1-203ENST00000550009 NWD2Q9ULI1 1742 aa23.07■■□□□ 1.28
COX6A1-203ENST00000550009 RALGAPBQ86X10 1494 aa23.05■■□□□ 1.28
COX6A1-203ENST00000550009 FAM83GA6ND36 823 aa23.04■■□□□ 1.28
COX6A1-203ENST00000550009 HAP1P54257 671 aaPredicted RBP23.04■■□□□ 1.28
COX6A1-203ENST00000550009 NGDNQ8NEJ9 315 aaKnown RBP23.04■■□□□ 1.28
COX6A1-203ENST00000550009 GJD4Q96KN9 370 aaPredicted RBP23.04■■□□□ 1.28
COX6A1-203ENST00000550009 ARHGEF10O15013 1369 aa23.03■■□□□ 1.28
COX6A1-203ENST00000550009 UNC5CLQ8IV45 518 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms