RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
RPH3A-217ENST00000549913 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
RPH3A-217ENST00000549913 LRRFIP1Q32MZ4 808 aaKnown RBP13.73□□□□□ -0.21
RPH3A-217ENST00000549913 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
RPH3A-217ENST00000549913 BCAR3O75815 825 aa13.72□□□□□ -0.21
RPH3A-217ENST00000549913 HSP90AB4PQ58FF6 505 aa13.72□□□□□ -0.21
RPH3A-217ENST00000549913 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
RPH3A-217ENST00000549913 BECN2A8MW95 431 aa13.72□□□□□ -0.21
RPH3A-217ENST00000549913 CC2D2AQ9P2K1 1620 aa13.72□□□□□ -0.21
RPH3A-217ENST00000549913 SLC12A5Q9H2X9 1139 aa13.72□□□□□ -0.21
RPH3A-217ENST00000549913 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
RPH3A-217ENST00000549913 EXOSC9Q06265 439 aaKnown RBP13.71□□□□□ -0.21
RPH3A-217ENST00000549913 RASSF8Q8NHQ8 419 aa13.71□□□□□ -0.21
RPH3A-217ENST00000549913 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
RPH3A-217ENST00000549913 ABCA10Q8WWZ4 1543 aa13.71□□□□□ -0.22
RPH3A-217ENST00000549913 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.22
RPH3A-217ENST00000549913 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
RPH3A-217ENST00000549913 PRKAR2BP31323 418 aa13.7□□□□□ -0.22
RPH3A-217ENST00000549913 NASPP49321 788 aaPredicted RBP13.7□□□□□ -0.22
RPH3A-217ENST00000549913 RNF20Q5VTR2 975 aa13.7□□□□□ -0.22
RPH3A-217ENST00000549913 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
RPH3A-217ENST00000549913 IL27Q8NEV9 243 aa13.7□□□□□ -0.22
RPH3A-217ENST00000549913 FAM13BQ9NYF5 915 aa13.7□□□□□ -0.22
RPH3A-217ENST00000549913 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
RPH3A-217ENST00000549913 MSH5O43196 834 aa13.69□□□□□ -0.22
RPH3A-217ENST00000549913 CDK13Q14004 1512 aaKnown RBP13.69□□□□□ -0.22
RPH3A-217ENST00000549913 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
RPH3A-217ENST00000549913 NLRP6P59044 892 aa13.68□□□□□ -0.22
RPH3A-217ENST00000549913 CLSTN1O94985 981 aa13.68□□□□□ -0.22
RPH3A-217ENST00000549913 PCF11O94913 1555 aaKnown RBP13.68□□□□□ -0.22
RPH3A-217ENST00000549913 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
RPH3A-217ENST00000549913 MAP3K1Q13233 1512 aa13.68□□□□□ -0.22
RPH3A-217ENST00000549913 ERC2O15083 957 aa13.68□□□□□ -0.22
RPH3A-217ENST00000549913 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
RPH3A-217ENST00000549913 EVA1CP58658 441 aa13.68□□□□□ -0.22
RPH3A-217ENST00000549913 SMC3Q9UQE7 1217 aa13.68□□□□□ -0.22
RPH3A-217ENST00000549913 UBTFL1P0CB47 393 aaPredicted RBP13.67□□□□□ -0.22
RPH3A-217ENST00000549913 GOLGA6L1Q8N7Z2 621 aa13.67□□□□□ -0.22
RPH3A-217ENST00000549913 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
RPH3A-217ENST00000549913 SLC52A1Q9NWF4 448 aa13.67□□□□□ -0.22
RPH3A-217ENST00000549913 GNAI3P08754 354 aa13.66□□□□□ -0.22
RPH3A-217ENST00000549913 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
RPH3A-217ENST00000549913 CT47B1P0C2W7 299 aaPredicted RBP13.66□□□□□ -0.22
RPH3A-217ENST00000549913 GAS2L2Q8NHY3 880 aa13.66□□□□□ -0.22
RPH3A-217ENST00000549913 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
RPH3A-217ENST00000549913 GCC1Q96CN9 775 aa13.65□□□□□ -0.22
RPH3A-217ENST00000549913 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
RPH3A-217ENST00000549913 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
RPH3A-217ENST00000549913 SYNE3Q6ZMZ3 975 aa13.65□□□□□ -0.22
RPH3A-217ENST00000549913 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
RPH3A-217ENST00000549913 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
RPH3A-217ENST00000549913 TSR2Q969E8 191 aaKnown RBP13.65□□□□□ -0.22
RPH3A-217ENST00000549913 CREBRFQ8IUR6 639 aa13.64□□□□□ -0.23
RPH3A-217ENST00000549913 TPM3P06753 285 aa13.64□□□□□ -0.23
RPH3A-217ENST00000549913 BICD2Q8TD16 824 aa13.64□□□□□ -0.23
RPH3A-217ENST00000549913 IQGAP2Q13576 1575 aa13.64□□□□□ -0.23
RPH3A-217ENST00000549913 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
RPH3A-217ENST00000549913 RABEP1Q15276 862 aa13.64□□□□□ -0.23
RPH3A-217ENST00000549913 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
RPH3A-217ENST00000549913 CPLX1O14810 134 aa13.63□□□□□ -0.23
RPH3A-217ENST00000549913 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
RPH3A-217ENST00000549913 CCDC30Q5VVM6 783 aa13.63□□□□□ -0.23
RPH3A-217ENST00000549913 RPGRIP1LQ68CZ1 1315 aa13.63□□□□□ -0.23
RPH3A-217ENST00000549913 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
RPH3A-217ENST00000549913 NUTM2GQ5VZR2 741 aa13.63□□□□□ -0.23
RPH3A-217ENST00000549913 RIC3Q7Z5B4 369 aa13.62□□□□□ -0.23
RPH3A-217ENST00000549913 G3V3G9 751 aa13.62□□□□□ -0.23
RPH3A-217ENST00000549913 MBD3O95983 291 aa13.62□□□□□ -0.23
RPH3A-217ENST00000549913 MVPQ14764 893 aaKnown RBP13.62□□□□□ -0.23
RPH3A-217ENST00000549913 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
RPH3A-217ENST00000549913 CABP1Q9NZU7 370 aa13.62□□□□□ -0.23
RPH3A-217ENST00000549913 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
RPH3A-217ENST00000549913 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
RPH3A-217ENST00000549913 TRDNQ13061 729 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
RPH3A-217ENST00000549913 CCDC141Q6ZP82 1450 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 SASS6Q6UVJ0 657 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 CLASRPQ8N2M8 674 aaKnown RBP13.61□□□□□ -0.23
RPH3A-217ENST00000549913 CUL7Q14999 1698 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 PTPN23Q9H3S7 1636 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 TRIM29Q14134 588 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 RNF214Q8ND24 703 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 NOC3LQ8WTT2 800 aaKnown RBP13.61□□□□□ -0.23
RPH3A-217ENST00000549913 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
RPH3A-217ENST00000549913 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
RPH3A-217ENST00000549913 MCM2P49736 904 aa13.6□□□□□ -0.23
RPH3A-217ENST00000549913 SURF6O75683 361 aaKnown RBP13.6□□□□□ -0.23
RPH3A-217ENST00000549913 APPP05067 770 aa13.6□□□□□ -0.23
RPH3A-217ENST00000549913 NEK4P51957 841 aa13.6□□□□□ -0.23
RPH3A-217ENST00000549913 ABCC5O15440 1437 aa13.6□□□□□ -0.23
RPH3A-217ENST00000549913 AIMP1Q12904 312 aaKnown RBP13.6□□□□□ -0.23
RPH3A-217ENST00000549913 PRPF40AO75400 957 aaKnown RBP13.6□□□□□ -0.23
RPH3A-217ENST00000549913 CCDC173Q0VFZ6 552 aa13.6□□□□□ -0.23
RPH3A-217ENST00000549913 ABTB2Q8N961 1025 aa13.6□□□□□ -0.23
RPH3A-217ENST00000549913 C1orf115Q9H7X2 142 aa13.6□□□□□ -0.23
RPH3A-217ENST00000549913 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
RPH3A-217ENST00000549913 ATAD2Q6PL18 1390 aa13.59□□□□□ -0.23
RPH3A-217ENST00000549913 MARCH6O60337 910 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms