RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 NAIPQ13075 1403 aa23.45■■□□□ 1.34
TCHP-208ENST00000549550 FNBP4Q8N3X1 1017 aaPredicted RBP23.45■■□□□ 1.34
TCHP-208ENST00000549550 ATRNO75882 1429 aa23.44■■□□□ 1.34
TCHP-208ENST00000549550 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
TCHP-208ENST00000549550 MYOM2P54296 1465 aa23.43■■□□□ 1.34
TCHP-208ENST00000549550 PXDNQ92626 1479 aa23.41■■□□□ 1.34
TCHP-208ENST00000549550 RPGRIP1LQ68CZ1 1315 aa23.4■■□□□ 1.34
TCHP-208ENST00000549550 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
TCHP-208ENST00000549550 BCL9LQ86UU0 1499 aa23.38■■□□□ 1.33
TCHP-208ENST00000549550 ESCO1Q5FWF5 840 aa23.38■■□□□ 1.33
TCHP-208ENST00000549550 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.37■■□□□ 1.33
TCHP-208ENST00000549550 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
TCHP-208ENST00000549550 XPCQ01831 940 aaPredicted RBP23.35■■□□□ 1.33
TCHP-208ENST00000549550 ZRANB1Q9UGI0 708 aa23.35■■□□□ 1.33
TCHP-208ENST00000549550 FOXO3O43524 673 aa23.33■■□□□ 1.33
TCHP-208ENST00000549550 FOXD1Q16676 465 aa23.33■■□□□ 1.33
TCHP-208ENST00000549550 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
TCHP-208ENST00000549550 IFT172Q9UG01 1749 aa23.33■■□□□ 1.32
TCHP-208ENST00000549550 KNDC1Q76NI1 1749 aa23.31■■□□□ 1.32
TCHP-208ENST00000549550 BRWD3Q6RI45 1802 aa23.31■■□□□ 1.32
TCHP-208ENST00000549550 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
TCHP-208ENST00000549550 CCDC125Q86Z20 511 aa23.3■■□□□ 1.32
TCHP-208ENST00000549550 GJD4Q96KN9 370 aaPredicted RBP23.3■■□□□ 1.32
TCHP-208ENST00000549550 LRPPRCP42704 1394 aaKnown RBP23.29■■□□□ 1.32
TCHP-208ENST00000549550 NUTM2FA1L443 756 aa23.29■■□□□ 1.32
TCHP-208ENST00000549550 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
TCHP-208ENST00000549550 GLI3P10071 1580 aa23.28■■□□□ 1.32
TCHP-208ENST00000549550 TECPR2O15040 1411 aa23.28■■□□□ 1.32
TCHP-208ENST00000549550 STK26Q9P289 416 aa23.28■■□□□ 1.32
TCHP-208ENST00000549550 ADGRF5Q8IZF2 1346 aa23.28■■□□□ 1.32
TCHP-208ENST00000549550 RGPD8O14715 1765 aaPredicted RBP23.27■■□□□ 1.32
TCHP-208ENST00000549550 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
TCHP-208ENST00000549550 USP32Q8NFA0 1604 aa23.26■■□□□ 1.31
TCHP-208ENST00000549550 RALGAPBQ86X10 1494 aa23.25■■□□□ 1.31
TCHP-208ENST00000549550 SLIT2O94813 1529 aa23.25■■□□□ 1.31
TCHP-208ENST00000549550 UNC5CLQ8IV45 518 aa23.23■■□□□ 1.31
TCHP-208ENST00000549550 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
TCHP-208ENST00000549550 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
TCHP-208ENST00000549550 SPATA31A3Q5VYP0 1347 aa23.22■■□□□ 1.31
TCHP-208ENST00000549550 RGL3Q3MIN7 710 aa23.21■■□□□ 1.31
TCHP-208ENST00000549550 TMEM132EQ6IEE7 984 aa23.21■■□□□ 1.31
TCHP-208ENST00000549550 ABCC11Q96J66 1382 aa23.21■■□□□ 1.31
TCHP-208ENST00000549550 BLMP54132 1417 aaPredicted RBP23.21■■□□□ 1.31
TCHP-208ENST00000549550 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
TCHP-208ENST00000549550 PLCH1Q4KWH8 1693 aa23.21■■□□□ 1.31
TCHP-208ENST00000549550 ANKRD30BQ9BXX2 1392 aa23.2■■□□□ 1.3
TCHP-208ENST00000549550 ABCA3Q99758 1704 aa23.19■■□□□ 1.3
TCHP-208ENST00000549550 NWD2Q9ULI1 1742 aa23.19■■□□□ 1.3
TCHP-208ENST00000549550 PIK3C2GO75747 1445 aa23.18■■□□□ 1.3
TCHP-208ENST00000549550 KRT28Q7Z3Y7 464 aa23.17■■□□□ 1.3
TCHP-208ENST00000549550 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
TCHP-208ENST00000549550 TNS3Q68CZ2 1445 aa23.15■■□□□ 1.3
TCHP-208ENST00000549550 HAP1P54257 671 aaPredicted RBP23.14■■□□□ 1.29
TCHP-208ENST00000549550 DEFB132Q7Z7B7 95 aa23.13■■□□□ 1.29
TCHP-208ENST00000549550 SEPT12Q8IYM1 358 aa23.12■■□□□ 1.29
TCHP-208ENST00000549550 CABLES1Q8TDN4 633 aa23.12■■□□□ 1.29
TCHP-208ENST00000549550 PLEKHG5O94827 1062 aa23.11■■□□□ 1.29
TCHP-208ENST00000549550 PHF8Q9UPP1 1060 aa23.11■■□□□ 1.29
TCHP-208ENST00000549550 SF3B2Q13435 895 aaKnown RBP23.1■■□□□ 1.29
TCHP-208ENST00000549550 VPS72Q15906 364 aa23.1■■□□□ 1.29
TCHP-208ENST00000549550 PSME1Q06323 249 aa23.09■■□□□ 1.29
TCHP-208ENST00000549550 NRXN1Q9ULB1 1477 aa23.09■■□□□ 1.29
TCHP-208ENST00000549550 LRP5O75197 1615 aa23.08■■□□□ 1.29
TCHP-208ENST00000549550 SIRT1Q96EB6 747 aa23.08■■□□□ 1.29
TCHP-208ENST00000549550 MPHOSPH9Q99550 1183 aa23.08■■□□□ 1.29
TCHP-208ENST00000549550 CCDC9Q9Y3X0 531 aaKnown RBP23.08■■□□□ 1.29
TCHP-208ENST00000549550 NRAPQ86VF7 1730 aa23.08■■□□□ 1.28
TCHP-208ENST00000549550 SBNO1A3KN83 1393 aa23.07■■□□□ 1.28
TCHP-208ENST00000549550 LMOD2Q6P5Q4 547 aa23.06■■□□□ 1.28
TCHP-208ENST00000549550 ARHGEF10O15013 1369 aa23.05■■□□□ 1.28
TCHP-208ENST00000549550 ONECUT3O60422 494 aaPredicted RBP23.05■■□□□ 1.28
TCHP-208ENST00000549550 KRT27Q7Z3Y8 459 aa23.05■■□□□ 1.28
TCHP-208ENST00000549550 C14orf93Q9H972 538 aaKnown RBP23.05■■□□□ 1.28
TCHP-208ENST00000549550 TRPM3Q9HCF6 1732 aaPredicted RBP23.04■■□□□ 1.28
TCHP-208ENST00000549550 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
TCHP-208ENST00000549550 SAFB2Q14151 953 aaKnown RBP eCLIP23.03■■□□□ 1.28
TCHP-208ENST00000549550 FAM83GA6ND36 823 aa23.01■■□□□ 1.27
TCHP-208ENST00000549550 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
TCHP-208ENST00000549550 PRAM1Q96QH2 718 aa23.01■■□□□ 1.27
TCHP-208ENST00000549550 ALS2Q96Q42 1657 aa23■■□□□ 1.27
TCHP-208ENST00000549550 COL14A1Q05707 1796 aaKnown RBP23■■□□□ 1.27
TCHP-208ENST00000549550 A0A0G2JS52 829 aa23■■□□□ 1.27
TCHP-208ENST00000549550 MYT1Q01538 1121 aa23■■□□□ 1.27
TCHP-208ENST00000549550 ADGRB2O60241 1585 aa23■■□□□ 1.27
TCHP-208ENST00000549550 PMFBP1Q8TBY8 1022 aa22.99■■□□□ 1.27
TCHP-208ENST00000549550 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
TCHP-208ENST00000549550 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
TCHP-208ENST00000549550 DLC1Q96QB1 1528 aa22.98■■□□□ 1.27
TCHP-208ENST00000549550 BAG6P46379 1132 aa22.96■■□□□ 1.27
TCHP-208ENST00000549550 FAM98CQ17RN3 349 aaKnown RBP22.96■■□□□ 1.27
TCHP-208ENST00000549550 CRYBG1Q9Y4K1 1723 aa22.96■■□□□ 1.27
TCHP-208ENST00000549550 PSDA5PKW4 1024 aaPredicted RBP22.95■■□□□ 1.26
TCHP-208ENST00000549550 BTG4Q9NY30 223 aa22.95■■□□□ 1.26
TCHP-208ENST00000549550 POGKQ9P215 609 aa22.95■■□□□ 1.26
TCHP-208ENST00000549550 TNS1Q9HBL0 1735 aaKnown RBP22.92■■□□□ 1.26
TCHP-208ENST00000549550 ADGRB1O14514 1584 aa22.92■■□□□ 1.26
TCHP-208ENST00000549550 THSD7AQ9UPZ6 1657 aa22.91■■□□□ 1.26
TCHP-208ENST00000549550 GPRASP1Q5JY77 1395 aa22.9■■□□□ 1.26
TCHP-208ENST00000549550 HRCP23327 699 aa22.9■■□□□ 1.26
TCHP-208ENST00000549550 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms