RNA–Protein interactions for RNA: ENST00000549500.1

PCED1B-204, Transcript of PC-esterase domain containing 1B, humanhuman

TSL 3

Gene PCED1B, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-204ENST00000549500 ABCC11Q96J66 1382 aa19.3■□□□□ 0.68
PCED1B-204ENST00000549500 YTHDC2Q9H6S0 1430 aaKnown RBP19.28■□□□□ 0.68
PCED1B-204ENST00000549500 C14orf93Q9H972 538 aaKnown RBP19.27■□□□□ 0.68
PCED1B-204ENST00000549500 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
PCED1B-204ENST00000549500 HRCP23327 699 aa19.26■□□□□ 0.67
PCED1B-204ENST00000549500 CFAP70Q5T0N1 1121 aa19.26■□□□□ 0.67
PCED1B-204ENST00000549500 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
PCED1B-204ENST00000549500 SOS2Q07890 1332 aaPredicted RBP19.25■□□□□ 0.67
PCED1B-204ENST00000549500 NUTM2BA6NNL0 878 aaPredicted RBP19.24■□□□□ 0.67
PCED1B-204ENST00000549500 NUTM2EB1AL46 878 aaPredicted RBP19.24■□□□□ 0.67
PCED1B-204ENST00000549500 NUTM2AQ8IVF1 878 aaPredicted RBP19.24■□□□□ 0.67
PCED1B-204ENST00000549500 MEX3CQ5U5Q3 659 aaKnown RBP19.22■□□□□ 0.67
PCED1B-204ENST00000549500 ADGRB1O14514 1584 aa19.22■□□□□ 0.67
PCED1B-204ENST00000549500 FMN2Q9NZ56 1722 aa19.22■□□□□ 0.67
PCED1B-204ENST00000549500 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
PCED1B-204ENST00000549500 PXDNQ92626 1479 aa19.2■□□□□ 0.66
PCED1B-204ENST00000549500 ESCO1Q5FWF5 840 aa19.19■□□□□ 0.66
PCED1B-204ENST00000549500 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
PCED1B-204ENST00000549500 DHX57Q6P158 1386 aaKnown RBP19.19■□□□□ 0.66
PCED1B-204ENST00000549500 RGPD8O14715 1765 aaPredicted RBP19.17■□□□□ 0.66
PCED1B-204ENST00000549500 DLC1Q96QB1 1528 aa19.16■□□□□ 0.66
PCED1B-204ENST00000549500 COL22A1Q8NFW1 1626 aaPredicted RBP19.16■□□□□ 0.66
PCED1B-204ENST00000549500 ZNF772Q68DY9 489 aaPredicted RBP19.16■□□□□ 0.66
PCED1B-204ENST00000549500 AFF2P51816 1311 aa19.16■□□□□ 0.66
PCED1B-204ENST00000549500 FOXO3O43524 673 aa19.15■□□□□ 0.66
PCED1B-204ENST00000549500 XPCQ01831 940 aaPredicted RBP19.15■□□□□ 0.66
PCED1B-204ENST00000549500 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
PCED1B-204ENST00000549500 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
PCED1B-204ENST00000549500 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
PCED1B-204ENST00000549500 NPHP3Q7Z494 1330 aa19.14■□□□□ 0.65
PCED1B-204ENST00000549500 SAFB2Q14151 953 aaKnown RBP eCLIP19.13■□□□□ 0.65
PCED1B-204ENST00000549500 C8orf37Q96NL8 207 aa19.13■□□□□ 0.65
PCED1B-204ENST00000549500 USP32Q8NFA0 1604 aa19.12■□□□□ 0.65
PCED1B-204ENST00000549500 KIF1AQ12756 1690 aa19.11■□□□□ 0.65
PCED1B-204ENST00000549500 ADAMTS2O95450 1211 aa19.11■□□□□ 0.65
PCED1B-204ENST00000549500 ADGRB2O60241 1585 aa19.1■□□□□ 0.65
PCED1B-204ENST00000549500 TRAK1Q9UPV9 953 aa19.09■□□□□ 0.65
PCED1B-204ENST00000549500 RXRBP28702 533 aa19.07■□□□□ 0.64
PCED1B-204ENST00000549500 ARHGEF28Q8N1W1 1705 aaKnown RBP19.07■□□□□ 0.64
PCED1B-204ENST00000549500 MARF1Q9Y4F3 1742 aaKnown RBP19.06■□□□□ 0.64
PCED1B-204ENST00000549500 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
PCED1B-204ENST00000549500 POGKQ9P215 609 aa19.06■□□□□ 0.64
PCED1B-204ENST00000549500 SPATA31A3Q5VYP0 1347 aa19.05■□□□□ 0.64
PCED1B-204ENST00000549500 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
PCED1B-204ENST00000549500 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
PCED1B-204ENST00000549500 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
PCED1B-204ENST00000549500 PHF8Q9UPP1 1060 aa19.05■□□□□ 0.64
PCED1B-204ENST00000549500 QTRT2Q9H974 415 aaKnown RBP19.04■□□□□ 0.64
PCED1B-204ENST00000549500 MINK1Q8N4C8 1332 aaPredicted RBP19.03■□□□□ 0.64
PCED1B-204ENST00000549500 PRR36Q9H6K5 1346 aa19.03■□□□□ 0.64
PCED1B-204ENST00000549500 RGS12O14924 1447 aa19.03■□□□□ 0.64
PCED1B-204ENST00000549500 ANKARQ7Z5J8 1434 aa19.03■□□□□ 0.64
PCED1B-204ENST00000549500 KRT28Q7Z3Y7 464 aa19.03■□□□□ 0.64
PCED1B-204ENST00000549500 FNBP4Q8N3X1 1017 aaPredicted RBP19.03■□□□□ 0.64
PCED1B-204ENST00000549500 KIAA1210Q9ULL0 1709 aa19.01■□□□□ 0.63
PCED1B-204ENST00000549500 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
PCED1B-204ENST00000549500 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
PCED1B-204ENST00000549500 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
PCED1B-204ENST00000549500 PMFBP1Q8TBY8 1022 aa19■□□□□ 0.63
PCED1B-204ENST00000549500 USP21Q9UK80 565 aa19■□□□□ 0.63
PCED1B-204ENST00000549500 BCL9LQ86UU0 1499 aa19■□□□□ 0.63
PCED1B-204ENST00000549500 EP400Q96L91 3159 aa18.99■□□□□ 0.63
PCED1B-204ENST00000549500 ABCA3Q99758 1704 aa18.99■□□□□ 0.63
PCED1B-204ENST00000549500 TRPM3Q9HCF6 1732 aaPredicted RBP18.99■□□□□ 0.63
PCED1B-204ENST00000549500 ATRNO75882 1429 aa18.99■□□□□ 0.63
PCED1B-204ENST00000549500 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
PCED1B-204ENST00000549500 NBPF1Q3BBV0 1214 aa18.98■□□□□ 0.63
PCED1B-204ENST00000549500 UPF1Q92900 1129 aaKnown RBP eCLIP18.98■□□□□ 0.63
PCED1B-204ENST00000549500 SBNO1A3KN83 1393 aa18.97■□□□□ 0.63
PCED1B-204ENST00000549500 CABLES1Q8TDN4 633 aa18.95■□□□□ 0.62
PCED1B-204ENST00000549500 ATP7BP35670 1465 aa18.95■□□□□ 0.62
PCED1B-204ENST00000549500 ALS2Q96Q42 1657 aa18.95■□□□□ 0.62
PCED1B-204ENST00000549500 SLIT2O94813 1529 aa18.95■□□□□ 0.62
PCED1B-204ENST00000549500 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.94■□□□□ 0.62
PCED1B-204ENST00000549500 PSME1Q06323 249 aa18.94■□□□□ 0.62
PCED1B-204ENST00000549500 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
PCED1B-204ENST00000549500 TRPC5Q9UL62 973 aaPredicted RBP18.94■□□□□ 0.62
PCED1B-204ENST00000549500 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
PCED1B-204ENST00000549500 L3MBTL2Q969R5 705 aa18.92■□□□□ 0.62
PCED1B-204ENST00000549500 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
PCED1B-204ENST00000549500 TOPAZ1Q8N9V7 1692 aa18.91■□□□□ 0.62
PCED1B-204ENST00000549500 ARHGEF10O15013 1369 aa18.91■□□□□ 0.62
PCED1B-204ENST00000549500 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
PCED1B-204ENST00000549500 PLCH1Q4KWH8 1693 aa18.9■□□□□ 0.62
PCED1B-204ENST00000549500 LMOD2Q6P5Q4 547 aa18.9■□□□□ 0.62
PCED1B-204ENST00000549500 CRYBG1Q9Y4K1 1723 aa18.9■□□□□ 0.62
PCED1B-204ENST00000549500 GLI3P10071 1580 aa18.89■□□□□ 0.62
PCED1B-204ENST00000549500 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
PCED1B-204ENST00000549500 CDK19Q9BWU1 502 aa18.88■□□□□ 0.61
PCED1B-204ENST00000549500 GPRASP1Q5JY77 1395 aa18.87■□□□□ 0.61
PCED1B-204ENST00000549500 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
PCED1B-204ENST00000549500 UNC5CLQ8IV45 518 aa18.87■□□□□ 0.61
PCED1B-204ENST00000549500 NWD2Q9ULI1 1742 aa18.86■□□□□ 0.61
PCED1B-204ENST00000549500 RALGAPBQ86X10 1494 aa18.86■□□□□ 0.61
PCED1B-204ENST00000549500 GJD4Q96KN9 370 aaPredicted RBP18.86■□□□□ 0.61
PCED1B-204ENST00000549500 NGDNQ8NEJ9 315 aaKnown RBP18.85■□□□□ 0.61
PCED1B-204ENST00000549500 QRICH2Q9H0J4 1663 aa18.85■□□□□ 0.61
PCED1B-204ENST00000549500 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
PCED1B-204ENST00000549500 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
PCED1B-204ENST00000549500 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms