RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 GJD4Q96KN9 370 aaPredicted RBP16.56■□□□□ 0.24
TRAFD1-206ENST00000549358 BCL9LQ86UU0 1499 aa16.55■□□□□ 0.24
TRAFD1-206ENST00000549358 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
TRAFD1-206ENST00000549358 NEXMIFQ5QGS0 1516 aa16.54■□□□□ 0.24
TRAFD1-206ENST00000549358 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
TRAFD1-206ENST00000549358 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
TRAFD1-206ENST00000549358 COL22A1Q8NFW1 1626 aaPredicted RBP16.52■□□□□ 0.24
TRAFD1-206ENST00000549358 VGFO15240 615 aaPredicted RBP16.52■□□□□ 0.24
TRAFD1-206ENST00000549358 NPHP3Q7Z494 1330 aa16.51■□□□□ 0.23
TRAFD1-206ENST00000549358 MYOM2P54296 1465 aa16.51■□□□□ 0.23
TRAFD1-206ENST00000549358 FOXO3O43524 673 aa16.51■□□□□ 0.23
TRAFD1-206ENST00000549358 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
TRAFD1-206ENST00000549358 CLTCL1P53675 1640 aa16.49■□□□□ 0.23
TRAFD1-206ENST00000549358 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
TRAFD1-206ENST00000549358 DEFB132Q7Z7B7 95 aa16.49■□□□□ 0.23
TRAFD1-206ENST00000549358 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
TRAFD1-206ENST00000549358 UNC5CLQ8IV45 518 aa16.48■□□□□ 0.23
TRAFD1-206ENST00000549358 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
TRAFD1-206ENST00000549358 PXDNQ92626 1479 aa16.47■□□□□ 0.23
TRAFD1-206ENST00000549358 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
TRAFD1-206ENST00000549358 SF3B2Q13435 895 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-206ENST00000549358 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
TRAFD1-206ENST00000549358 RALGAPBQ86X10 1494 aa16.45■□□□□ 0.22
TRAFD1-206ENST00000549358 SEPT12Q8IYM1 358 aa16.43■□□□□ 0.22
TRAFD1-206ENST00000549358 PRAG1Q86YV5 1406 aa16.43■□□□□ 0.22
TRAFD1-206ENST00000549358 RPGRIP1LQ68CZ1 1315 aa16.43■□□□□ 0.22
TRAFD1-206ENST00000549358 GLI3P10071 1580 aa16.43■□□□□ 0.22
TRAFD1-206ENST00000549358 MARF1Q9Y4F3 1742 aaKnown RBP16.42■□□□□ 0.22
TRAFD1-206ENST00000549358 KIF1BO60333 1816 aa16.42■□□□□ 0.22
TRAFD1-206ENST00000549358 SLIT2O94813 1529 aa16.41■□□□□ 0.22
TRAFD1-206ENST00000549358 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
TRAFD1-206ENST00000549358 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
TRAFD1-206ENST00000549358 STK26Q9P289 416 aa16.41■□□□□ 0.22
TRAFD1-206ENST00000549358 CDC42BPGQ6DT37 1551 aa16.4■□□□□ 0.22
TRAFD1-206ENST00000549358 PSDA5PKW4 1024 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-206ENST00000549358 SPATA31A3Q5VYP0 1347 aa16.4■□□□□ 0.22
TRAFD1-206ENST00000549358 NAIPQ13075 1403 aa16.39■□□□□ 0.21
TRAFD1-206ENST00000549358 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
TRAFD1-206ENST00000549358 HAP1P54257 671 aaPredicted RBP16.39■□□□□ 0.21
TRAFD1-206ENST00000549358 CCDC9Q9Y3X0 531 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-206ENST00000549358 KRT28Q7Z3Y7 464 aa16.38■□□□□ 0.21
TRAFD1-206ENST00000549358 KRT27Q7Z3Y8 459 aa16.38■□□□□ 0.21
TRAFD1-206ENST00000549358 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.38■□□□□ 0.21
TRAFD1-206ENST00000549358 ONECUT3O60422 494 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-206ENST00000549358 VPS72Q15906 364 aa16.37■□□□□ 0.21
TRAFD1-206ENST00000549358 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
TRAFD1-206ENST00000549358 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-206ENST00000549358 HRCP23327 699 aa16.35■□□□□ 0.21
TRAFD1-206ENST00000549358 BRWD3Q6RI45 1802 aa16.35■□□□□ 0.21
TRAFD1-206ENST00000549358 LRP5O75197 1615 aa16.34■□□□□ 0.21
TRAFD1-206ENST00000549358 A0A0G2JS52 829 aa16.34■□□□□ 0.21
TRAFD1-206ENST00000549358 BAG6P46379 1132 aa16.34■□□□□ 0.21
TRAFD1-206ENST00000549358 MYT1Q01538 1121 aa16.34■□□□□ 0.21
TRAFD1-206ENST00000549358 ADGRF5Q8IZF2 1346 aa16.34■□□□□ 0.21
TRAFD1-206ENST00000549358 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
TRAFD1-206ENST00000549358 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
TRAFD1-206ENST00000549358 LMOD2Q6P5Q4 547 aa16.33■□□□□ 0.2
TRAFD1-206ENST00000549358 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
TRAFD1-206ENST00000549358 PLEKHH1Q9ULM0 1364 aa16.33■□□□□ 0.2
TRAFD1-206ENST00000549358 USP32Q8NFA0 1604 aa16.33■□□□□ 0.2
TRAFD1-206ENST00000549358 PSME1Q06323 249 aa16.32■□□□□ 0.2
TRAFD1-206ENST00000549358 PPLO60437 1756 aa16.31■□□□□ 0.2
TRAFD1-206ENST00000549358 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
TRAFD1-206ENST00000549358 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
TRAFD1-206ENST00000549358 PHF8Q9UPP1 1060 aa16.3■□□□□ 0.2
TRAFD1-206ENST00000549358 TECPR2O15040 1411 aa16.29■□□□□ 0.2
TRAFD1-206ENST00000549358 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
TRAFD1-206ENST00000549358 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
TRAFD1-206ENST00000549358 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
TRAFD1-206ENST00000549358 FAM98CQ17RN3 349 aaKnown RBP16.29■□□□□ 0.2
TRAFD1-206ENST00000549358 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
TRAFD1-206ENST00000549358 R3HDM1Q15032 1099 aaKnown RBP16.28■□□□□ 0.2
TRAFD1-206ENST00000549358 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
TRAFD1-206ENST00000549358 FAM182BQ5T319 152 aa16.27■□□□□ 0.2
TRAFD1-206ENST00000549358 FMN2Q9NZ56 1722 aa16.27■□□□□ 0.19
TRAFD1-206ENST00000549358 KIF1AQ12756 1690 aa16.27■□□□□ 0.19
TRAFD1-206ENST00000549358 PLCH1Q4KWH8 1693 aa16.26■□□□□ 0.19
TRAFD1-206ENST00000549358 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
TRAFD1-206ENST00000549358 SBNO1A3KN83 1393 aa16.25■□□□□ 0.19
TRAFD1-206ENST00000549358 YTHDC2Q9H6S0 1430 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-206ENST00000549358 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
TRAFD1-206ENST00000549358 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
TRAFD1-206ENST00000549358 PMFBP1Q8TBY8 1022 aa16.23■□□□□ 0.19
TRAFD1-206ENST00000549358 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
TRAFD1-206ENST00000549358 ANKRD30BQ9BXX2 1392 aa16.23■□□□□ 0.19
TRAFD1-206ENST00000549358 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
TRAFD1-206ENST00000549358 EZH2Q15910 746 aaKnown RBP16.21■□□□□ 0.19
TRAFD1-206ENST00000549358 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.19
TRAFD1-206ENST00000549358 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
TRAFD1-206ENST00000549358 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
TRAFD1-206ENST00000549358 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
TRAFD1-206ENST00000549358 RGPD8O14715 1765 aaPredicted RBP16.19■□□□□ 0.18
TRAFD1-206ENST00000549358 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
TRAFD1-206ENST00000549358 ABCA3Q99758 1704 aa16.18■□□□□ 0.18
TRAFD1-206ENST00000549358 SPATA31A5Q5VU36 1347 aa16.18■□□□□ 0.18
TRAFD1-206ENST00000549358 SPATA31A7Q8IWB4 1347 aa16.18■□□□□ 0.18
TRAFD1-206ENST00000549358 C14orf93Q9H972 538 aaKnown RBP16.17■□□□□ 0.18
TRAFD1-206ENST00000549358 RGPD1P0DJD0 1748 aa16.16■□□□□ 0.18
TRAFD1-206ENST00000549358 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
TRAFD1-206ENST00000549358 DHX57Q6P158 1386 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms