RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 NLRP13Q86W25 1043 aa14.67□□□□□ -0.06
LINC00661-204ENST00000549354 AMER1Q5JTC6 1135 aaPredicted RBP14.67□□□□□ -0.06
LINC00661-204ENST00000549354 SETD1AO15047 1707 aaKnown RBP14.66□□□□□ -0.06
LINC00661-204ENST00000549354 TMEM132EQ6IEE7 984 aa14.66□□□□□ -0.06
LINC00661-204ENST00000549354 CCDC146Q8IYE0 955 aa14.66□□□□□ -0.06
LINC00661-204ENST00000549354 ARXQ96QS3 562 aa14.66□□□□□ -0.06
LINC00661-204ENST00000549354 TRAK1Q9UPV9 953 aa14.66□□□□□ -0.06
LINC00661-204ENST00000549354 RGS3P49796 1198 aa14.65□□□□□ -0.06
LINC00661-204ENST00000549354 MLECQ14165 292 aa14.65□□□□□ -0.06
LINC00661-204ENST00000549354 RIMS2Q9UQ26 1411 aa14.65□□□□□ -0.06
LINC00661-204ENST00000549354 PTPRMP28827 1452 aa14.65□□□□□ -0.06
LINC00661-204ENST00000549354 SMG6Q86US8 1419 aaKnown RBP14.64□□□□□ -0.07
LINC00661-204ENST00000549354 NUTM2DQ5VT03 806 aaPredicted RBP14.64□□□□□ -0.07
LINC00661-204ENST00000549354 DLC1Q96QB1 1528 aa14.64□□□□□ -0.07
LINC00661-204ENST00000549354 TULP4Q9NRJ4 1543 aa14.64□□□□□ -0.07
LINC00661-204ENST00000549354 TNRQ92752 1358 aa14.63□□□□□ -0.07
LINC00661-204ENST00000549354 YTHDC2Q9H6S0 1430 aaKnown RBP14.63□□□□□ -0.07
LINC00661-204ENST00000549354 PRKCSHP14314 528 aaPredicted RBP14.63□□□□□ -0.07
LINC00661-204ENST00000549354 KNSTRNQ9Y448 316 aa14.63□□□□□ -0.07
LINC00661-204ENST00000549354 NRXN3Q9Y4C0 1643 aa14.63□□□□□ -0.07
LINC00661-204ENST00000549354 RCAN3Q9UKA8 241 aa14.63□□□□□ -0.07
LINC00661-204ENST00000549354 ESF1Q9H501 851 aaKnown RBP14.62□□□□□ -0.07
LINC00661-204ENST00000549354 UBR1Q8IWV7 1749 aa14.62□□□□□ -0.07
LINC00661-204ENST00000549354 USP32Q8NFA0 1604 aa14.62□□□□□ -0.07
LINC00661-204ENST00000549354 RRP1P56182 461 aaKnown RBP14.61□□□□□ -0.07
LINC00661-204ENST00000549354 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.61□□□□□ -0.07
LINC00661-204ENST00000549354 NLRP1Q9C000 1473 aa14.6□□□□□ -0.07
LINC00661-204ENST00000549354 C20orf194Q5TEA3 1177 aa14.6□□□□□ -0.07
LINC00661-204ENST00000549354 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
LINC00661-204ENST00000549354 NEFMP07197 916 aa14.59□□□□□ -0.07
LINC00661-204ENST00000549354 CARD14Q9BXL6 1004 aa14.59□□□□□ -0.07
LINC00661-204ENST00000549354 IL27Q8NEV9 243 aa14.59□□□□□ -0.07
LINC00661-204ENST00000549354 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
LINC00661-204ENST00000549354 PDE4AP27815 886 aa14.58□□□□□ -0.07
LINC00661-204ENST00000549354 C3P01024 1663 aa14.58□□□□□ -0.08
LINC00661-204ENST00000549354 NINLQ9Y2I6 1382 aa14.57□□□□□ -0.08
LINC00661-204ENST00000549354 ABCC11Q96J66 1382 aa14.57□□□□□ -0.08
LINC00661-204ENST00000549354 CRBNQ96SW2 442 aa14.57□□□□□ -0.08
LINC00661-204ENST00000549354 PPP2R1AP30153 589 aa14.56□□□□□ -0.08
LINC00661-204ENST00000549354 TMEM2Q9UHN6 1383 aa14.56□□□□□ -0.08
LINC00661-204ENST00000549354 KNDC1Q76NI1 1749 aa14.56□□□□□ -0.08
LINC00661-204ENST00000549354 BLMP54132 1417 aaPredicted RBP14.56□□□□□ -0.08
LINC00661-204ENST00000549354 FER1L4A9Z1Z3 1794 aa14.56□□□□□ -0.08
LINC00661-204ENST00000549354 HDGFP51858 240 aaKnown RBP14.56□□□□□ -0.08
LINC00661-204ENST00000549354 SIRT1Q96EB6 747 aa14.55□□□□□ -0.08
LINC00661-204ENST00000549354 SAFB2Q14151 953 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC00661-204ENST00000549354 TECPR2O15040 1411 aa14.54□□□□□ -0.08
LINC00661-204ENST00000549354 ANKRD36BQ8N2N9 1353 aa14.54□□□□□ -0.08
LINC00661-204ENST00000549354 DAXXQ9UER7 740 aaPredicted RBP14.53□□□□□ -0.08
LINC00661-204ENST00000549354 RNF123Q5XPI4 1314 aa14.53□□□□□ -0.08
LINC00661-204ENST00000549354 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
LINC00661-204ENST00000549354 ARHGAP23Q9P227 1491 aa14.53□□□□□ -0.08
LINC00661-204ENST00000549354 SLIT1O75093 1534 aa14.53□□□□□ -0.08
LINC00661-204ENST00000549354 ADAMTS8Q9UP79 889 aa14.53□□□□□ -0.08
LINC00661-204ENST00000549354 RRP7AQ9Y3A4 280 aaKnown RBP14.53□□□□□ -0.08
LINC00661-204ENST00000549354 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.08
LINC00661-204ENST00000549354 ANO8Q9HCE9 1232 aaPredicted RBP14.52□□□□□ -0.08
LINC00661-204ENST00000549354 PRAM1Q96QH2 718 aa14.52□□□□□ -0.09
LINC00661-204ENST00000549354 ATAD2Q6PL18 1390 aa14.51□□□□□ -0.09
LINC00661-204ENST00000549354 WDR43Q15061 677 aaKnown RBP eCLIP14.51□□□□□ -0.09
LINC00661-204ENST00000549354 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
LINC00661-204ENST00000549354 FAM135BQ49AJ0 1406 aa14.51□□□□□ -0.09
LINC00661-204ENST00000549354 NSD3Q9BZ95 1437 aa14.51□□□□□ -0.09
LINC00661-204ENST00000549354 MED14O60244 1454 aa14.51□□□□□ -0.09
LINC00661-204ENST00000549354 STK26Q9P289 416 aa14.51□□□□□ -0.09
LINC00661-204ENST00000549354 CPS1P31327 1500 aa14.51□□□□□ -0.09
LINC00661-204ENST00000549354 BCL2L13Q9BXK5 485 aa14.51□□□□□ -0.09
LINC00661-204ENST00000549354 PLEKHG1Q9ULL1 1385 aa14.5□□□□□ -0.09
LINC00661-204ENST00000549354 NSD2O96028 1365 aa14.5□□□□□ -0.09
LINC00661-204ENST00000549354 METP08581 1390 aa14.5□□□□□ -0.09
LINC00661-204ENST00000549354 FRAT1Q92837 279 aaPredicted RBP14.5□□□□□ -0.09
LINC00661-204ENST00000549354 ADAMTS13Q76LX8 1427 aa14.5□□□□□ -0.09
LINC00661-204ENST00000549354 CD163L1Q9NR16 1453 aa14.49□□□□□ -0.09
LINC00661-204ENST00000549354 CANXP27824 592 aaKnown RBP14.49□□□□□ -0.09
LINC00661-204ENST00000549354 SPRYD3Q8NCJ5 442 aa14.48□□□□□ -0.09
LINC00661-204ENST00000549354 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.48□□□□□ -0.09
LINC00661-204ENST00000549354 POGKQ9P215 609 aa14.48□□□□□ -0.09
LINC00661-204ENST00000549354 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
LINC00661-204ENST00000549354 TCERG1O14776 1098 aaKnown RBP14.47□□□□□ -0.09
LINC00661-204ENST00000549354 BACH2Q9BYV9 841 aa14.47□□□□□ -0.09
LINC00661-204ENST00000549354 POLR3AO14802 1390 aaPredicted RBP14.47□□□□□ -0.09
LINC00661-204ENST00000549354 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
LINC00661-204ENST00000549354 CEBPAP49715 358 aaPredicted RBP14.46□□□□□ -0.09
LINC00661-204ENST00000549354 PDE3BQ13370 1112 aa14.45□□□□□ -0.1
LINC00661-204ENST00000549354 CLUAP1Q96AJ1 413 aa14.45□□□□□ -0.1
LINC00661-204ENST00000549354 PLEKHH1Q9ULM0 1364 aa14.45□□□□□ -0.1
LINC00661-204ENST00000549354 MINK1Q8N4C8 1332 aaPredicted RBP14.45□□□□□ -0.1
LINC00661-204ENST00000549354 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
LINC00661-204ENST00000549354 ADAMTSL3P82987 1691 aa14.45□□□□□ -0.1
LINC00661-204ENST00000549354 LTKP29376 864 aa14.44□□□□□ -0.1
LINC00661-204ENST00000549354 CDK19Q9BWU1 502 aa14.44□□□□□ -0.1
LINC00661-204ENST00000549354 ANKRD26Q9UPS8 1709 aa14.44□□□□□ -0.1
LINC00661-204ENST00000549354 APAF1O14727 1248 aa14.44□□□□□ -0.1
LINC00661-204ENST00000549354 ADGRB2O60241 1585 aa14.43□□□□□ -0.1
LINC00661-204ENST00000549354 DIP2AQ14689 1571 aa14.43□□□□□ -0.1
LINC00661-204ENST00000549354 ATP7BP35670 1465 aa14.43□□□□□ -0.1
LINC00661-204ENST00000549354 SRPK2P78362 688 aaKnown RBP14.43□□□□□ -0.1
LINC00661-204ENST00000549354 BCAR3O75815 825 aa14.42□□□□□ -0.1
LINC00661-204ENST00000549354 WAPLQ7Z5K2 1190 aa14.42□□□□□ -0.1
LINC00661-204ENST00000549354 TERF2IPQ9NYB0 399 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms