RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
RAB5B-205ENST00000549034 XRN1Q8IZH2 1706 aaKnown RBP13.7□□□□□ -0.22
RAB5B-205ENST00000549034 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
RAB5B-205ENST00000549034 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
RAB5B-205ENST00000549034 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
RAB5B-205ENST00000549034 ASXL1Q8IXJ9 1541 aa13.68□□□□□ -0.22
RAB5B-205ENST00000549034 PLEKHH1Q9ULM0 1364 aa13.67□□□□□ -0.22
RAB5B-205ENST00000549034 KIAA1210Q9ULL0 1709 aa13.66□□□□□ -0.22
RAB5B-205ENST00000549034 ROCK2O75116 1388 aaKnown RBP13.66□□□□□ -0.22
RAB5B-205ENST00000549034 PTCH1Q13635 1447 aa13.65□□□□□ -0.22
RAB5B-205ENST00000549034 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
RAB5B-205ENST00000549034 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
RAB5B-205ENST00000549034 TECPR2O15040 1411 aa13.64□□□□□ -0.23
RAB5B-205ENST00000549034 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
RAB5B-205ENST00000549034 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
RAB5B-205ENST00000549034 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
RAB5B-205ENST00000549034 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
RAB5B-205ENST00000549034 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
RAB5B-205ENST00000549034 KNDC1Q76NI1 1749 aa13.63□□□□□ -0.23
RAB5B-205ENST00000549034 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
RAB5B-205ENST00000549034 ADGRL3Q9HAR2 1447 aa13.62□□□□□ -0.23
RAB5B-205ENST00000549034 DLC1Q96QB1 1528 aa13.6□□□□□ -0.23
RAB5B-205ENST00000549034 NALCNQ8IZF0 1738 aa13.59□□□□□ -0.23
RAB5B-205ENST00000549034 ESCO1Q5FWF5 840 aa13.59□□□□□ -0.23
RAB5B-205ENST00000549034 CENPJQ9HC77 1338 aaPredicted RBP13.59□□□□□ -0.23
RAB5B-205ENST00000549034 HSPA1LP34931 641 aa13.58□□□□□ -0.24
RAB5B-205ENST00000549034 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
RAB5B-205ENST00000549034 DCCP43146 1447 aa13.57□□□□□ -0.24
RAB5B-205ENST00000549034 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
RAB5B-205ENST00000549034 CDK19Q9BWU1 502 aa13.57□□□□□ -0.24
RAB5B-205ENST00000549034 ARHGEF28Q8N1W1 1705 aaKnown RBP13.56□□□□□ -0.24
RAB5B-205ENST00000549034 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
RAB5B-205ENST00000549034 MST1RQ04912 1400 aa13.56□□□□□ -0.24
RAB5B-205ENST00000549034 RALGAPBQ86X10 1494 aa13.55□□□□□ -0.24
RAB5B-205ENST00000549034 EIF3AQ14152 1382 aaKnown RBP13.55□□□□□ -0.24
RAB5B-205ENST00000549034 GPRASP1Q5JY77 1395 aa13.55□□□□□ -0.24
RAB5B-205ENST00000549034 C1orf167Q5SNV9 1468 aa13.55□□□□□ -0.24
RAB5B-205ENST00000549034 DDX17Q92841 729 aaKnown RBP13.54□□□□□ -0.24
RAB5B-205ENST00000549034 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
RAB5B-205ENST00000549034 ST20-MTHFSA0A0A6YYL1 179 aa13.53□□□□□ -0.24
RAB5B-205ENST00000549034 SRPK2P78362 688 aaKnown RBP13.53□□□□□ -0.24
RAB5B-205ENST00000549034 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
RAB5B-205ENST00000549034 RGPD8O14715 1765 aaPredicted RBP13.53□□□□□ -0.24
RAB5B-205ENST00000549034 FOXO3O43524 673 aa13.52□□□□□ -0.25
RAB5B-205ENST00000549034 PMFBP1Q8TBY8 1022 aa13.52□□□□□ -0.25
RAB5B-205ENST00000549034 CABP2Q9NPB3 220 aa13.52□□□□□ -0.25
RAB5B-205ENST00000549034 EVC2Q86UK5 1308 aa13.52□□□□□ -0.25
RAB5B-205ENST00000549034 CDC42BPGQ6DT37 1551 aa13.51□□□□□ -0.25
RAB5B-205ENST00000549034 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
RAB5B-205ENST00000549034 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
RAB5B-205ENST00000549034 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
RAB5B-205ENST00000549034 PSME1Q06323 249 aa13.49□□□□□ -0.25
RAB5B-205ENST00000549034 QRICH2Q9H0J4 1663 aa13.49□□□□□ -0.25
RAB5B-205ENST00000549034 PHLPP1O60346 1717 aa13.48□□□□□ -0.25
RAB5B-205ENST00000549034 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
RAB5B-205ENST00000549034 XPCQ01831 940 aaPredicted RBP13.48□□□□□ -0.25
RAB5B-205ENST00000549034 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
RAB5B-205ENST00000549034 NGDNQ8NEJ9 315 aaKnown RBP13.48□□□□□ -0.25
RAB5B-205ENST00000549034 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
RAB5B-205ENST00000549034 USP47Q96K76 1375 aa13.47□□□□□ -0.25
RAB5B-205ENST00000549034 ADGRB2O60241 1585 aa13.47□□□□□ -0.25
RAB5B-205ENST00000549034 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
RAB5B-205ENST00000549034 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
RAB5B-205ENST00000549034 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
RAB5B-205ENST00000549034 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.25
RAB5B-205ENST00000549034 TESK2Q96S53 571 aa13.46□□□□□ -0.25
RAB5B-205ENST00000549034 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
RAB5B-205ENST00000549034 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
RAB5B-205ENST00000549034 TMF1P82094 1093 aa13.45□□□□□ -0.26
RAB5B-205ENST00000549034 TULP4Q9NRJ4 1543 aa13.44□□□□□ -0.26
RAB5B-205ENST00000549034 PLEKHG3A1L390 1219 aa13.44□□□□□ -0.26
RAB5B-205ENST00000549034 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
RAB5B-205ENST00000549034 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
RAB5B-205ENST00000549034 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
RAB5B-205ENST00000549034 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
RAB5B-205ENST00000549034 ACEP12821 1306 aa13.42□□□□□ -0.26
RAB5B-205ENST00000549034 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
RAB5B-205ENST00000549034 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
RAB5B-205ENST00000549034 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
RAB5B-205ENST00000549034 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
RAB5B-205ENST00000549034 NUTM2BA6NNL0 878 aaPredicted RBP13.41□□□□□ -0.26
RAB5B-205ENST00000549034 NUTM2EB1AL46 878 aaPredicted RBP13.41□□□□□ -0.26
RAB5B-205ENST00000549034 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
RAB5B-205ENST00000549034 NUTM2AQ8IVF1 878 aaPredicted RBP13.41□□□□□ -0.26
RAB5B-205ENST00000549034 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
RAB5B-205ENST00000549034 NHSL1Q5SYE7 1610 aa13.41□□□□□ -0.26
RAB5B-205ENST00000549034 JCADQ9P266 1359 aa13.41□□□□□ -0.26
RAB5B-205ENST00000549034 PPIP5K1Q6PFW1 1433 aa13.4□□□□□ -0.26
RAB5B-205ENST00000549034 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
RAB5B-205ENST00000549034 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
RAB5B-205ENST00000549034 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
RAB5B-205ENST00000549034 ATP7BP35670 1465 aa13.4□□□□□ -0.26
RAB5B-205ENST00000549034 KIF1AQ12756 1690 aa13.4□□□□□ -0.26
RAB5B-205ENST00000549034 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
RAB5B-205ENST00000549034 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
RAB5B-205ENST00000549034 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
RAB5B-205ENST00000549034 ITSN1Q15811 1721 aa13.39□□□□□ -0.27
RAB5B-205ENST00000549034 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
RAB5B-205ENST00000549034 SPATA31A3Q5VYP0 1347 aa13.38□□□□□ -0.27
RAB5B-205ENST00000549034 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms