RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 GJD4Q96KN9 370 aaPredicted RBP29.45■■■□□ 2.31
CTDSP2-204ENST00000548823 MYOM2P54296 1465 aa29.44■■■□□ 2.3
CTDSP2-204ENST00000548823 BLMP54132 1417 aaPredicted RBP29.43■■■□□ 2.3
CTDSP2-204ENST00000548823 MARF1Q9Y4F3 1742 aaKnown RBP29.41■■■□□ 2.3
CTDSP2-204ENST00000548823 ROCK1Q13464 1354 aa29.4■■■□□ 2.3
CTDSP2-204ENST00000548823 SPHKAPQ2M3C7 1700 aa29.4■■■□□ 2.3
CTDSP2-204ENST00000548823 NEXMIFQ5QGS0 1516 aa29.37■■■□□ 2.29
CTDSP2-204ENST00000548823 LRP5O75197 1615 aa29.37■■■□□ 2.29
CTDSP2-204ENST00000548823 NPHP3Q7Z494 1330 aa29.36■■■□□ 2.29
CTDSP2-204ENST00000548823 ROBO2Q9HCK4 1378 aa29.35■■■□□ 2.29
CTDSP2-204ENST00000548823 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.34■■■□□ 2.29
CTDSP2-204ENST00000548823 DEFB132Q7Z7B7 95 aa29.34■■■□□ 2.29
CTDSP2-204ENST00000548823 SF3B2Q13435 895 aaKnown RBP29.31■■■□□ 2.28
CTDSP2-204ENST00000548823 RALGAPBQ86X10 1494 aa29.3■■■□□ 2.28
CTDSP2-204ENST00000548823 PXDNQ92626 1479 aa29.3■■■□□ 2.28
CTDSP2-204ENST00000548823 PRAG1Q86YV5 1406 aa29.3■■■□□ 2.28
CTDSP2-204ENST00000548823 UNC5CLQ8IV45 518 aa29.3■■■□□ 2.28
CTDSP2-204ENST00000548823 ESCO1Q5FWF5 840 aa29.29■■■□□ 2.28
CTDSP2-204ENST00000548823 GLI3P10071 1580 aa29.29■■■□□ 2.28
CTDSP2-204ENST00000548823 HFM1A2PYH4 1435 aa29.28■■■□□ 2.28
CTDSP2-204ENST00000548823 BRWD3Q6RI45 1802 aa29.27■■■□□ 2.28
CTDSP2-204ENST00000548823 SLIT2O94813 1529 aa29.26■■■□□ 2.27
CTDSP2-204ENST00000548823 CLSPNQ9HAW4 1339 aa29.26■■■□□ 2.27
CTDSP2-204ENST00000548823 CLTCL1P53675 1640 aa29.25■■■□□ 2.27
CTDSP2-204ENST00000548823 VGFO15240 615 aaPredicted RBP29.24■■■□□ 2.27
CTDSP2-204ENST00000548823 FOXO3O43524 673 aa29.24■■■□□ 2.27
CTDSP2-204ENST00000548823 XPCQ01831 940 aaPredicted RBP29.23■■■□□ 2.27
CTDSP2-204ENST00000548823 LRPPRCP42704 1394 aaKnown RBP29.23■■■□□ 2.27
CTDSP2-204ENST00000548823 KIF1BO60333 1816 aa29.22■■■□□ 2.27
CTDSP2-204ENST00000548823 CDC42BPGQ6DT37 1551 aa29.21■■■□□ 2.27
CTDSP2-204ENST00000548823 SEPT12Q8IYM1 358 aa29.2■■■□□ 2.26
CTDSP2-204ENST00000548823 DHX57Q6P158 1386 aaKnown RBP29.17■■■□□ 2.26
CTDSP2-204ENST00000548823 ITGAEP38570 1179 aa29.16■■■□□ 2.26
CTDSP2-204ENST00000548823 PSDA5PKW4 1024 aaPredicted RBP29.14■■■□□ 2.26
CTDSP2-204ENST00000548823 ONECUT3O60422 494 aaPredicted RBP29.14■■■□□ 2.26
CTDSP2-204ENST00000548823 RAB3GAP2Q9H2M9 1393 aa29.14■■■□□ 2.26
CTDSP2-204ENST00000548823 VPS72Q15906 364 aa29.13■■■□□ 2.25
CTDSP2-204ENST00000548823 KRT27Q7Z3Y8 459 aa29.13■■■□□ 2.25
CTDSP2-204ENST00000548823 SPATA31A3Q5VYP0 1347 aa29.12■■■□□ 2.25
CTDSP2-204ENST00000548823 USP32Q8NFA0 1604 aa29.12■■■□□ 2.25
CTDSP2-204ENST00000548823 BAG6P46379 1132 aa29.12■■■□□ 2.25
CTDSP2-204ENST00000548823 RPGRIP1LQ68CZ1 1315 aa29.11■■■□□ 2.25
CTDSP2-204ENST00000548823 NAIPQ13075 1403 aa29.09■■■□□ 2.25
CTDSP2-204ENST00000548823 NUTM2FA1L443 756 aa29.07■■■□□ 2.24
CTDSP2-204ENST00000548823 NWD2Q9ULI1 1742 aa29.05■■■□□ 2.24
CTDSP2-204ENST00000548823 CCDC144AA2RUR9 1427 aa29.05■■■□□ 2.24
CTDSP2-204ENST00000548823 CCDC9Q9Y3X0 531 aaKnown RBP29.04■■■□□ 2.24
CTDSP2-204ENST00000548823 HAP1P54257 671 aaPredicted RBP29.03■■■□□ 2.24
CTDSP2-204ENST00000548823 KRT28Q7Z3Y7 464 aa29.02■■■□□ 2.24
CTDSP2-204ENST00000548823 PPLO60437 1756 aa29.02■■■□□ 2.24
CTDSP2-204ENST00000548823 KIF1AQ12756 1690 aa29.02■■■□□ 2.24
CTDSP2-204ENST00000548823 PLCH1Q4KWH8 1693 aa29.02■■■□□ 2.24
CTDSP2-204ENST00000548823 WAPLQ7Z5K2 1190 aa29■■■□□ 2.23
CTDSP2-204ENST00000548823 TECPR2O15040 1411 aa28.98■■■□□ 2.23
CTDSP2-204ENST00000548823 FMN2Q9NZ56 1722 aa28.96■■■□□ 2.23
CTDSP2-204ENST00000548823 TNS3Q68CZ2 1445 aa28.96■■■□□ 2.23
CTDSP2-204ENST00000548823 A0A0G2JS52 829 aa28.96■■■□□ 2.23
CTDSP2-204ENST00000548823 MYT1Q01538 1121 aa28.96■■■□□ 2.23
CTDSP2-204ENST00000548823 EN1Q05925 392 aaPredicted RBP28.96■■■□□ 2.23
CTDSP2-204ENST00000548823 CABLES1Q8TDN4 633 aa28.96■■■□□ 2.23
CTDSP2-204ENST00000548823 PSME1Q06323 249 aa28.95■■■□□ 2.22
CTDSP2-204ENST00000548823 R3HDM1Q15032 1099 aaKnown RBP28.95■■■□□ 2.22
CTDSP2-204ENST00000548823 STK26Q9P289 416 aa28.95■■■□□ 2.22
CTDSP2-204ENST00000548823 RGPD1P0DJD0 1748 aa28.93■■■□□ 2.22
CTDSP2-204ENST00000548823 ACIN1Q9UKV3 1341 aaKnown RBP28.91■■■□□ 2.22
CTDSP2-204ENST00000548823 ABCC11Q96J66 1382 aa28.91■■■□□ 2.22
CTDSP2-204ENST00000548823 FAM83GA6ND36 823 aa28.9■■■□□ 2.22
CTDSP2-204ENST00000548823 FAM98CQ17RN3 349 aaKnown RBP28.9■■■□□ 2.22
CTDSP2-204ENST00000548823 PLEKHH1Q9ULM0 1364 aa28.9■■■□□ 2.22
CTDSP2-204ENST00000548823 SBNO1A3KN83 1393 aa28.89■■■□□ 2.22
CTDSP2-204ENST00000548823 ABCA3Q99758 1704 aa28.89■■■□□ 2.22
CTDSP2-204ENST00000548823 PLEKHG5O94827 1062 aa28.88■■■□□ 2.21
CTDSP2-204ENST00000548823 PHF8Q9UPP1 1060 aa28.88■■■□□ 2.21
CTDSP2-204ENST00000548823 DISP2A7MBM2 1401 aa28.88■■■□□ 2.21
CTDSP2-204ENST00000548823 KNDC1Q76NI1 1749 aa28.87■■■□□ 2.21
CTDSP2-204ENST00000548823 ADGRF5Q8IZF2 1346 aa28.87■■■□□ 2.21
CTDSP2-204ENST00000548823 ARHGEF10O15013 1369 aa28.87■■■□□ 2.21
CTDSP2-204ENST00000548823 YY1P25490 414 aa28.87■■■□□ 2.21
CTDSP2-204ENST00000548823 RGPD8O14715 1765 aaPredicted RBP28.85■■■□□ 2.21
CTDSP2-204ENST00000548823 LMOD2Q6P5Q4 547 aa28.85■■■□□ 2.21
CTDSP2-204ENST00000548823 NRAPQ86VF7 1730 aa28.85■■■□□ 2.21
CTDSP2-204ENST00000548823 FAM182BQ5T319 152 aa28.82■■■□□ 2.2
CTDSP2-204ENST00000548823 TMEM132EQ6IEE7 984 aa28.82■■■□□ 2.2
CTDSP2-204ENST00000548823 BTG4Q9NY30 223 aa28.82■■■□□ 2.2
CTDSP2-204ENST00000548823 EZH2Q15910 746 aaKnown RBP28.81■■■□□ 2.2
CTDSP2-204ENST00000548823 NRXN1Q9ULB1 1477 aa28.81■■■□□ 2.2
CTDSP2-204ENST00000548823 TNS1Q9HBL0 1735 aaKnown RBP28.81■■■□□ 2.2
CTDSP2-204ENST00000548823 IFT172Q9UG01 1749 aa28.8■■■□□ 2.2
CTDSP2-204ENST00000548823 SIRT1Q96EB6 747 aa28.79■■■□□ 2.2
CTDSP2-204ENST00000548823 SLC4A1APQ9BWU0 796 aaKnown RBP28.77■■■□□ 2.2
CTDSP2-204ENST00000548823 YTHDC2Q9H6S0 1430 aaKnown RBP28.77■■■□□ 2.2
CTDSP2-204ENST00000548823 CAMKK2Q96RR4 588 aa28.76■■■□□ 2.2
CTDSP2-204ENST00000548823 ANKRD30BQ9BXX2 1392 aa28.76■■■□□ 2.19
CTDSP2-204ENST00000548823 SPATA31A5Q5VU36 1347 aa28.76■■■□□ 2.19
CTDSP2-204ENST00000548823 SPATA31A7Q8IWB4 1347 aa28.76■■■□□ 2.19
CTDSP2-204ENST00000548823 COL14A1Q05707 1796 aaKnown RBP28.75■■■□□ 2.19
CTDSP2-204ENST00000548823 ADGRB2O60241 1585 aa28.73■■■□□ 2.19
CTDSP2-204ENST00000548823 THSD7AQ9UPZ6 1657 aa28.73■■■□□ 2.19
CTDSP2-204ENST00000548823 PARD3Q8TEW0 1356 aa28.72■■■□□ 2.19
CTDSP2-204ENST00000548823 RGL3Q3MIN7 710 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms