RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 ROBO1Q9Y6N7 1651 aa13.85□□□□□ -0.19
USP15-208ENST00000548524 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
USP15-208ENST00000548524 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
USP15-208ENST00000548524 LRPPRCP42704 1394 aaKnown RBP13.84□□□□□ -0.19
USP15-208ENST00000548524 BRINP3Q76B58 766 aa13.84□□□□□ -0.19
USP15-208ENST00000548524 DCAF11Q8TEB1 546 aa13.84□□□□□ -0.19
USP15-208ENST00000548524 MYOM2P54296 1465 aa13.84□□□□□ -0.19
USP15-208ENST00000548524 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
USP15-208ENST00000548524 PRAG1Q86YV5 1406 aa13.83□□□□□ -0.2
USP15-208ENST00000548524 WAPLQ7Z5K2 1190 aa13.82□□□□□ -0.2
USP15-208ENST00000548524 STAC3Q96MF2 364 aa13.82□□□□□ -0.2
USP15-208ENST00000548524 MED1Q15648 1581 aaPredicted RBP13.82□□□□□ -0.2
USP15-208ENST00000548524 DHX57Q6P158 1386 aaKnown RBP13.82□□□□□ -0.2
USP15-208ENST00000548524 ABCC11Q96J66 1382 aa13.82□□□□□ -0.2
USP15-208ENST00000548524 MST1RQ04912 1400 aa13.81□□□□□ -0.2
USP15-208ENST00000548524 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
USP15-208ENST00000548524 ILDR2Q71H61 639 aa13.81□□□□□ -0.2
USP15-208ENST00000548524 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
USP15-208ENST00000548524 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
USP15-208ENST00000548524 IFT172Q9UG01 1749 aa13.8□□□□□ -0.2
USP15-208ENST00000548524 JCADQ9P266 1359 aa13.8□□□□□ -0.2
USP15-208ENST00000548524 TECPR2O15040 1411 aa13.8□□□□□ -0.2
USP15-208ENST00000548524 FKBP8Q14318 412 aa13.79□□□□□ -0.2
USP15-208ENST00000548524 C1orf167Q5SNV9 1468 aa13.79□□□□□ -0.2
USP15-208ENST00000548524 TRIM26Q12899 539 aaPredicted RBP13.78□□□□□ -0.2
USP15-208ENST00000548524 SIRT1Q96EB6 747 aa13.78□□□□□ -0.2
USP15-208ENST00000548524 PLEKHH1Q9ULM0 1364 aa13.78□□□□□ -0.2
USP15-208ENST00000548524 ASXL1Q8IXJ9 1541 aa13.78□□□□□ -0.2
USP15-208ENST00000548524 POGKQ9P215 609 aa13.77□□□□□ -0.21
USP15-208ENST00000548524 PHLPP1O60346 1717 aa13.76□□□□□ -0.21
USP15-208ENST00000548524 NUTM2FA1L443 756 aa13.76□□□□□ -0.21
USP15-208ENST00000548524 SAFB2Q14151 953 aaKnown RBP eCLIP13.76□□□□□ -0.212e-8■■■□□ 14.6
USP15-208ENST00000548524 DDX17Q92841 729 aaKnown RBP13.76□□□□□ -0.21
USP15-208ENST00000548524 PRAM1Q96QH2 718 aa13.76□□□□□ -0.21
USP15-208ENST00000548524 ORAI2Q96SN7 254 aa13.76□□□□□ -0.21
USP15-208ENST00000548524 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
USP15-208ENST00000548524 NALCNQ8IZF0 1738 aa13.76□□□□□ -0.21
USP15-208ENST00000548524 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
USP15-208ENST00000548524 ESCO1Q5FWF5 840 aa13.75□□□□□ -0.21
USP15-208ENST00000548524 LRRC59Q96AG4 307 aaKnown RBP13.75□□□□□ -0.21
USP15-208ENST00000548524 SPATA31A6Q5VVP1 1343 aa13.74□□□□□ -0.21
USP15-208ENST00000548524 MEX3CQ5U5Q3 659 aaKnown RBP13.74□□□□□ -0.21
USP15-208ENST00000548524 LAMC1P11047 1609 aa13.73□□□□□ -0.21
USP15-208ENST00000548524 COL16A1Q07092 1604 aaPredicted RBP13.73□□□□□ -0.21
USP15-208ENST00000548524 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
USP15-208ENST00000548524 NUTM2BA6NNL0 878 aaPredicted RBP13.72□□□□□ -0.21
USP15-208ENST00000548524 NUTM2EB1AL46 878 aaPredicted RBP13.72□□□□□ -0.21
USP15-208ENST00000548524 NUTM2AQ8IVF1 878 aaPredicted RBP13.72□□□□□ -0.21
USP15-208ENST00000548524 SIN3AQ96ST3 1273 aa13.72□□□□□ -0.21
USP15-208ENST00000548524 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.21
USP15-208ENST00000548524 KNDC1Q76NI1 1749 aa13.7□□□□□ -0.22
USP15-208ENST00000548524 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
USP15-208ENST00000548524 ADGRB1O14514 1584 aa13.7□□□□□ -0.22
USP15-208ENST00000548524 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
USP15-208ENST00000548524 SOCS7O14512 581 aa13.69□□□□□ -0.22
USP15-208ENST00000548524 L3MBTL2Q969R5 705 aa13.69□□□□□ -0.22
USP15-208ENST00000548524 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
USP15-208ENST00000548524 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
USP15-208ENST00000548524 MINK1Q8N4C8 1332 aaPredicted RBP13.68□□□□□ -0.22
USP15-208ENST00000548524 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
USP15-208ENST00000548524 FOXO3O43524 673 aa13.68□□□□□ -0.22
USP15-208ENST00000548524 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
USP15-208ENST00000548524 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
USP15-208ENST00000548524 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
USP15-208ENST00000548524 NHSL1Q5SYE7 1610 aa13.66□□□□□ -0.22
USP15-208ENST00000548524 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
USP15-208ENST00000548524 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
USP15-208ENST00000548524 LRP6O75581 1613 aa13.65□□□□□ -0.22
USP15-208ENST00000548524 WASLO00401 505 aaPredicted RBP13.64□□□□□ -0.23
USP15-208ENST00000548524 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
USP15-208ENST00000548524 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
USP15-208ENST00000548524 EIF3AQ14152 1382 aaKnown RBP13.63□□□□□ -0.23
USP15-208ENST00000548524 ZNF772Q68DY9 489 aaPredicted RBP13.63□□□□□ -0.23
USP15-208ENST00000548524 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
USP15-208ENST00000548524 ADAMTS2O95450 1211 aa13.62□□□□□ -0.23
USP15-208ENST00000548524 PSME1Q06323 249 aa13.62□□□□□ -0.23
USP15-208ENST00000548524 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
USP15-208ENST00000548524 C8orf37Q96NL8 207 aa13.62□□□□□ -0.23
USP15-208ENST00000548524 ANKARQ7Z5J8 1434 aa13.62□□□□□ -0.23
USP15-208ENST00000548524 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
USP15-208ENST00000548524 PXDNQ92626 1479 aa13.61□□□□□ -0.23
USP15-208ENST00000548524 AFF2P51816 1311 aa13.6□□□□□ -0.23
USP15-208ENST00000548524 TONSLQ96HA7 1378 aa13.59□□□□□ -0.23
USP15-208ENST00000548524 LMOD2Q6P5Q4 547 aa13.59□□□□□ -0.23
USP15-208ENST00000548524 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
USP15-208ENST00000548524 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
USP15-208ENST00000548524 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
USP15-208ENST00000548524 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
USP15-208ENST00000548524 CENPJQ9HC77 1338 aaPredicted RBP13.59□□□□□ -0.23
USP15-208ENST00000548524 ADGRB2O60241 1585 aa13.58□□□□□ -0.23
USP15-208ENST00000548524 NGDNQ8NEJ9 315 aaKnown RBP13.58□□□□□ -0.24
USP15-208ENST00000548524 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.24
USP15-208ENST00000548524 KIF1AQ12756 1690 aa13.57□□□□□ -0.24
USP15-208ENST00000548524 KIAA1210Q9ULL0 1709 aa13.57□□□□□ -0.24
USP15-208ENST00000548524 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
USP15-208ENST00000548524 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
USP15-208ENST00000548524 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
USP15-208ENST00000548524 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
USP15-208ENST00000548524 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
USP15-208ENST00000548524 NUDT16Q96DE0 195 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms