RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
CALCOCO1-210ENST00000548263 MBD5Q9P267 1494 aa11.87□□□□□ -0.51
CALCOCO1-210ENST00000548263 ABCA8O94911 1581 aa11.87□□□□□ -0.51
CALCOCO1-210ENST00000548263 DENND4BO75064 1496 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO1-210ENST00000548263 HSP90AA2PQ14568 343 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO1-210ENST00000548263 TESK2Q96S53 571 aa11.87□□□□□ -0.51
CALCOCO1-210ENST00000548263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
CALCOCO1-210ENST00000548263 EVC2Q86UK5 1308 aa11.87□□□□□ -0.51
CALCOCO1-210ENST00000548263 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
CALCOCO1-210ENST00000548263 DNTTIP2Q5QJE6 756 aaKnown RBP11.86□□□□□ -0.51
CALCOCO1-210ENST00000548263 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
CALCOCO1-210ENST00000548263 LTV1Q96GA3 475 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO1-210ENST00000548263 TSR2Q969E8 191 aaKnown RBP11.85□□□□□ -0.51
CALCOCO1-210ENST00000548263 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
CALCOCO1-210ENST00000548263 TTC37Q6PGP7 1564 aa11.85□□□□□ -0.51
CALCOCO1-210ENST00000548263 TERF2IPQ9NYB0 399 aa11.85□□□□□ -0.51
CALCOCO1-210ENST00000548263 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
CALCOCO1-210ENST00000548263 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
CALCOCO1-210ENST00000548263 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
CALCOCO1-210ENST00000548263 NOS1P29475 1434 aa11.84□□□□□ -0.51
CALCOCO1-210ENST00000548263 HMOX1P09601 288 aa11.84□□□□□ -0.51
CALCOCO1-210ENST00000548263 MCM4P33991 863 aa11.84□□□□□ -0.51
CALCOCO1-210ENST00000548263 AAMPQ13685 434 aa11.84□□□□□ -0.51
CALCOCO1-210ENST00000548263 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO1-210ENST00000548263 RIPK4P57078 832 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 EXOSC9Q06265 439 aaKnown RBP11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 CABP1Q9NZU7 370 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 KDM5BQ9UGL1 1544 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 TBC1D2Q9BYX2 928 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 SEC24BO95487 1268 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 MRE11P49959 708 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 ARID3AQ99856 593 aa11.83□□□□□ -0.52
CALCOCO1-210ENST00000548263 NKTRP30414 1462 aaKnown RBP11.82□□□□□ -0.52
CALCOCO1-210ENST00000548263 RARSP54136 660 aaKnown RBP11.82□□□□□ -0.52
CALCOCO1-210ENST00000548263 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
CALCOCO1-210ENST00000548263 ARHGEF12Q9NZN5 1544 aa11.82□□□□□ -0.52
CALCOCO1-210ENST00000548263 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
CALCOCO1-210ENST00000548263 PTMSP20962 102 aa11.82□□□□□ -0.52
CALCOCO1-210ENST00000548263 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
CALCOCO1-210ENST00000548263 PRAG1Q86YV5 1406 aa11.81□□□□□ -0.52
CALCOCO1-210ENST00000548263 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
CALCOCO1-210ENST00000548263 A0A0G2JS52 829 aa11.81□□□□□ -0.52
CALCOCO1-210ENST00000548263 KDM2BQ8NHM5 1336 aa11.81□□□□□ -0.52
CALCOCO1-210ENST00000548263 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
CALCOCO1-210ENST00000548263 FOXD4L5Q5VV16 416 aaPredicted RBP11.81□□□□□ -0.52
CALCOCO1-210ENST00000548263 FOXD4L4Q8WXT5 416 aaPredicted RBP11.81□□□□□ -0.52
CALCOCO1-210ENST00000548263 UHRF1BP1Q6BDS2 1440 aa11.8□□□□□ -0.52
CALCOCO1-210ENST00000548263 EID1Q9Y6B2 187 aa11.8□□□□□ -0.52
CALCOCO1-210ENST00000548263 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
CALCOCO1-210ENST00000548263 SKOR2Q2VWA4 1001 aaPredicted RBP11.8□□□□□ -0.52
CALCOCO1-210ENST00000548263 ADGRL2O95490 1459 aa11.79□□□□□ -0.52
CALCOCO1-210ENST00000548263 PCDHB15Q9Y5E8 787 aa11.79□□□□□ -0.52
CALCOCO1-210ENST00000548263 WDR63Q8IWG1 891 aa11.79□□□□□ -0.52
CALCOCO1-210ENST00000548263 A2MP01023 1474 aa11.79□□□□□ -0.52
CALCOCO1-210ENST00000548263 CDK19Q9BWU1 502 aa11.79□□□□□ -0.52
CALCOCO1-210ENST00000548263 DUOX2Q9NRD8 1548 aa11.78□□□□□ -0.52
CALCOCO1-210ENST00000548263 NOB1Q9ULX3 412 aaKnown RBP11.78□□□□□ -0.52
CALCOCO1-210ENST00000548263 TNNQ9UQP3 1299 aa11.78□□□□□ -0.52
CALCOCO1-210ENST00000548263 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.53
CALCOCO1-210ENST00000548263 SLC52A1Q9NWF4 448 aa11.77□□□□□ -0.53
CALCOCO1-210ENST00000548263 CDC42BPAQ5VT25 1732 aa11.77□□□□□ -0.53
CALCOCO1-210ENST00000548263 NINLQ9Y2I6 1382 aa11.77□□□□□ -0.53
CALCOCO1-210ENST00000548263 SHANK2Q9UPX8 1470 aa11.77□□□□□ -0.53
CALCOCO1-210ENST00000548263 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.53
CALCOCO1-210ENST00000548263 TBC1D32Q96NH3 1257 aa11.76□□□□□ -0.53
CALCOCO1-210ENST00000548263 UGGT1Q9NYU2 1555 aa11.76□□□□□ -0.53
CALCOCO1-210ENST00000548263 C1orf115Q9H7X2 142 aa11.76□□□□□ -0.53
CALCOCO1-210ENST00000548263 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
CALCOCO1-210ENST00000548263 NCKAP5LQ9HCH0 1330 aa11.76□□□□□ -0.53
CALCOCO1-210ENST00000548263 ATF7IPQ6VMQ6 1270 aa11.76□□□□□ -0.53
CALCOCO1-210ENST00000548263 DMRT2Q9Y5R5 561 aa11.76□□□□□ -0.53
CALCOCO1-210ENST00000548263 KIF16BQ96L93 1317 aa11.76□□□□□ -0.53
CALCOCO1-210ENST00000548263 CFAP44Q96MT7 982 aa11.75□□□□□ -0.53
CALCOCO1-210ENST00000548263 RRS1Q15050 365 aaKnown RBP11.75□□□□□ -0.53
CALCOCO1-210ENST00000548263 NSD3Q9BZ95 1437 aa11.75□□□□□ -0.53
CALCOCO1-210ENST00000548263 RLBP1P12271 317 aa11.74□□□□□ -0.53
CALCOCO1-210ENST00000548263 FOXD4L6Q3SYB3 417 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO1-210ENST00000548263 FOXD4L3Q6VB84 417 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO1-210ENST00000548263 CARD14Q9BXL6 1004 aa11.74□□□□□ -0.53
CALCOCO1-210ENST00000548263 ST18O60284 1047 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 MCTP1Q6DN14 999 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 SLC4A10Q6U841 1118 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 SSH1Q8WYL5 1049 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 PANK2Q9BZ23 570 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 ZNF518AQ6AHZ1 1483 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 ESPNB1AK53 854 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.537e-6■□□□□ 8.4
CALCOCO1-210ENST00000548263 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 COG3Q96JB2 828 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 NASPP49321 788 aaPredicted RBP11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 PLA2R1Q13018 1463 aa11.73□□□□□ -0.53
CALCOCO1-210ENST00000548263 C14orf93Q9H972 538 aaKnown RBP11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 ZCCHC11Q5TAX3 1644 aaKnown RBP11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 THUMPD2Q9BTF0 503 aaKnown RBP11.72□□□□□ -0.53
CALCOCO1-210ENST00000548263 BCORL1Q5H9F3 1711 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms