RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 WAPLQ7Z5K2 1190 aa19.49■□□□□ 0.71
NR4A1-209ENST00000548232 MPHOSPH9Q99550 1183 aa19.49■□□□□ 0.71
NR4A1-209ENST00000548232 CDK12Q9NYV4 1490 aaPredicted RBP19.48■□□□□ 0.71
NR4A1-209ENST00000548232 FOXO3O43524 673 aa19.48■□□□□ 0.71
NR4A1-209ENST00000548232 TMEM132EQ6IEE7 984 aa19.48■□□□□ 0.71
NR4A1-209ENST00000548232 CCDC144AA2RUR9 1427 aa19.46■□□□□ 0.71
NR4A1-209ENST00000548232 TRPC5Q9UL62 973 aaPredicted RBP19.45■□□□□ 0.7
NR4A1-209ENST00000548232 NPHP3Q7Z494 1330 aa19.45■□□□□ 0.7
NR4A1-209ENST00000548232 RGS12O14924 1447 aa19.44■□□□□ 0.7
NR4A1-209ENST00000548232 FNBP4Q8N3X1 1017 aaPredicted RBP19.42■□□□□ 0.7
NR4A1-209ENST00000548232 PPLO60437 1756 aa19.42■□□□□ 0.7
NR4A1-209ENST00000548232 ANKRD30BQ9BXX2 1392 aa19.41■□□□□ 0.7
NR4A1-209ENST00000548232 PRAG1Q86YV5 1406 aa19.41■□□□□ 0.7
NR4A1-209ENST00000548232 LRPPRCP42704 1394 aaKnown RBP19.4■□□□□ 0.7
NR4A1-209ENST00000548232 PLEKHH1Q9ULM0 1364 aa19.39■□□□□ 0.69
NR4A1-209ENST00000548232 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
NR4A1-209ENST00000548232 SPATA31E1Q6ZUB1 1445 aa19.38■□□□□ 0.69
NR4A1-209ENST00000548232 LAMC1P11047 1609 aa19.37■□□□□ 0.69
NR4A1-209ENST00000548232 ABCC11Q96J66 1382 aa19.37■□□□□ 0.69
NR4A1-209ENST00000548232 ATAD2Q6PL18 1390 aa19.36■□□□□ 0.69
NR4A1-209ENST00000548232 KRT28Q7Z3Y7 464 aa19.36■□□□□ 0.69
NR4A1-209ENST00000548232 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
NR4A1-209ENST00000548232 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
NR4A1-209ENST00000548232 SAFB2Q14151 953 aaKnown RBP eCLIP19.34■□□□□ 0.69
NR4A1-209ENST00000548232 CFAP70Q5T0N1 1121 aa19.34■□□□□ 0.69
NR4A1-209ENST00000548232 PXDNQ92626 1479 aa19.34■□□□□ 0.69
NR4A1-209ENST00000548232 GJD4Q96KN9 370 aaPredicted RBP19.33■□□□□ 0.68
NR4A1-209ENST00000548232 C14orf93Q9H972 538 aaKnown RBP19.33■□□□□ 0.68
NR4A1-209ENST00000548232 MYOM2P54296 1465 aa19.33■□□□□ 0.68
NR4A1-209ENST00000548232 TECPR2O15040 1411 aa19.33■□□□□ 0.68
NR4A1-209ENST00000548232 ATRNO75882 1429 aa19.33■□□□□ 0.68
NR4A1-209ENST00000548232 YTHDC2Q9H6S0 1430 aaKnown RBP19.33■□□□□ 0.68
NR4A1-209ENST00000548232 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
NR4A1-209ENST00000548232 SPATA31A3Q5VYP0 1347 aa19.31■□□□□ 0.68
NR4A1-209ENST00000548232 SIRT1Q96EB6 747 aa19.31■□□□□ 0.68
NR4A1-209ENST00000548232 PIK3C2GO75747 1445 aa19.31■□□□□ 0.68
NR4A1-209ENST00000548232 DHX57Q6P158 1386 aaKnown RBP19.31■□□□□ 0.68
NR4A1-209ENST00000548232 BCL9LQ86UU0 1499 aa19.3■□□□□ 0.68
NR4A1-209ENST00000548232 PSME1Q06323 249 aa19.3■□□□□ 0.68
NR4A1-209ENST00000548232 PRAM1Q96QH2 718 aa19.3■□□□□ 0.68
NR4A1-209ENST00000548232 POGKQ9P215 609 aa19.3■□□□□ 0.68
NR4A1-209ENST00000548232 PHF8Q9UPP1 1060 aa19.3■□□□□ 0.68
NR4A1-209ENST00000548232 COL22A1Q8NFW1 1626 aaPredicted RBP19.29■□□□□ 0.68
NR4A1-209ENST00000548232 CABLES1Q8TDN4 633 aa19.29■□□□□ 0.68
NR4A1-209ENST00000548232 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
NR4A1-209ENST00000548232 UNC5CLQ8IV45 518 aa19.28■□□□□ 0.68
NR4A1-209ENST00000548232 ZRANB1Q9UGI0 708 aa19.26■□□□□ 0.67
NR4A1-209ENST00000548232 CCDC125Q86Z20 511 aa19.25■□□□□ 0.67
NR4A1-209ENST00000548232 PMFBP1Q8TBY8 1022 aa19.25■□□□□ 0.67
NR4A1-209ENST00000548232 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
NR4A1-209ENST00000548232 CCDC9Q9Y3X0 531 aaKnown RBP19.25■□□□□ 0.67
NR4A1-209ENST00000548232 IFT172Q9UG01 1749 aa19.23■□□□□ 0.67
NR4A1-209ENST00000548232 TRAK1Q9UPV9 953 aa19.23■□□□□ 0.67
NR4A1-209ENST00000548232 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
NR4A1-209ENST00000548232 FMN2Q9NZ56 1722 aa19.21■□□□□ 0.67
NR4A1-209ENST00000548232 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
NR4A1-209ENST00000548232 DCAF11Q8TEB1 546 aa19.2■□□□□ 0.66
NR4A1-209ENST00000548232 RALGAPBQ86X10 1494 aa19.2■□□□□ 0.66
NR4A1-209ENST00000548232 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
NR4A1-209ENST00000548232 TNS3Q68CZ2 1445 aa19.19■□□□□ 0.66
NR4A1-209ENST00000548232 SEPT12Q8IYM1 358 aa19.19■□□□□ 0.66
NR4A1-209ENST00000548232 MINK1Q8N4C8 1332 aaPredicted RBP19.19■□□□□ 0.66
NR4A1-209ENST00000548232 KIF1AQ12756 1690 aa19.18■□□□□ 0.66
NR4A1-209ENST00000548232 FAM83GA6ND36 823 aa19.18■□□□□ 0.66
NR4A1-209ENST00000548232 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
NR4A1-209ENST00000548232 VPS72Q15906 364 aa19.18■□□□□ 0.66
NR4A1-209ENST00000548232 SLIT2O94813 1529 aa19.18■□□□□ 0.66
NR4A1-209ENST00000548232 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
NR4A1-209ENST00000548232 NRXN1Q9ULB1 1477 aa19.17■□□□□ 0.66
NR4A1-209ENST00000548232 A0A0G2JS52 829 aa19.17■□□□□ 0.66
NR4A1-209ENST00000548232 MYT1Q01538 1121 aa19.17■□□□□ 0.66
NR4A1-209ENST00000548232 SBNO1A3KN83 1393 aa19.17■□□□□ 0.66
NR4A1-209ENST00000548232 SF3B2Q13435 895 aaKnown RBP19.16■□□□□ 0.66
NR4A1-209ENST00000548232 ARHGEF10O15013 1369 aa19.16■□□□□ 0.66
NR4A1-209ENST00000548232 PAK3O75914 559 aaPredicted RBP19.14■□□□□ 0.65
NR4A1-209ENST00000548232 RGPD8O14715 1765 aaPredicted RBP19.14■□□□□ 0.65
NR4A1-209ENST00000548232 DEFB132Q7Z7B7 95 aa19.13■□□□□ 0.65
NR4A1-209ENST00000548232 NGDNQ8NEJ9 315 aaKnown RBP19.13■□□□□ 0.65
NR4A1-209ENST00000548232 GPRASP1Q5JY77 1395 aa19.13■□□□□ 0.65
NR4A1-209ENST00000548232 GLI3P10071 1580 aa19.13■□□□□ 0.65
NR4A1-209ENST00000548232 USP32Q8NFA0 1604 aa19.12■□□□□ 0.65
NR4A1-209ENST00000548232 KRT27Q7Z3Y8 459 aa19.12■□□□□ 0.65
NR4A1-209ENST00000548232 BTG4Q9NY30 223 aa19.12■□□□□ 0.65
NR4A1-209ENST00000548232 ANKARQ7Z5J8 1434 aa19.11■□□□□ 0.65
NR4A1-209ENST00000548232 WASLO00401 505 aaPredicted RBP19.11■□□□□ 0.65
NR4A1-209ENST00000548232 ONECUT3O60422 494 aaPredicted RBP19.11■□□□□ 0.65
NR4A1-209ENST00000548232 EP400Q96L91 3159 aa19.11■□□□□ 0.65
NR4A1-209ENST00000548232 BLMP54132 1417 aaPredicted RBP19.1■□□□□ 0.65
NR4A1-209ENST00000548232 PRR36Q9H6K5 1346 aa19.1■□□□□ 0.65
NR4A1-209ENST00000548232 DLC1Q96QB1 1528 aa19.1■□□□□ 0.65
NR4A1-209ENST00000548232 FAM98CQ17RN3 349 aaKnown RBP19.09■□□□□ 0.65
NR4A1-209ENST00000548232 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.08■□□□□ 0.65
NR4A1-209ENST00000548232 SRCAPQ6ZRS2 3230 aa19.08■□□□□ 0.64
NR4A1-209ENST00000548232 EIF3AQ14152 1382 aaKnown RBP19.06■□□□□ 0.64
NR4A1-209ENST00000548232 ADGRB1O14514 1584 aa19.06■□□□□ 0.64
NR4A1-209ENST00000548232 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
NR4A1-209ENST00000548232 NUDT16Q96DE0 195 aaKnown RBP19.05■□□□□ 0.64
NR4A1-209ENST00000548232 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
NR4A1-209ENST00000548232 PRDM11Q9NQV5 511 aa19.04■□□□□ 0.64
NR4A1-209ENST00000548232 FAM182BQ5T319 152 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms