RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 COL22A1Q8NFW1 1626 aaPredicted RBP24.08■■□□□ 1.45
SVOP-202ENST00000548229 RPGRIP1LQ68CZ1 1315 aa24.08■■□□□ 1.44
SVOP-202ENST00000548229 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
SVOP-202ENST00000548229 KIF1BO60333 1816 aa24.06■■□□□ 1.44
SVOP-202ENST00000548229 ESCO1Q5FWF5 840 aa24.06■■□□□ 1.44
SVOP-202ENST00000548229 GJD4Q96KN9 370 aaPredicted RBP24.06■■□□□ 1.44
SVOP-202ENST00000548229 LRPPRCP42704 1394 aaKnown RBP24.05■■□□□ 1.44
SVOP-202ENST00000548229 MYOM2P54296 1465 aa24.05■■□□□ 1.44
SVOP-202ENST00000548229 BCL9LQ86UU0 1499 aa24.04■■□□□ 1.44
SVOP-202ENST00000548229 FOXO3O43524 673 aa23.99■■□□□ 1.43
SVOP-202ENST00000548229 UNC5CLQ8IV45 518 aa23.98■■□□□ 1.43
SVOP-202ENST00000548229 BLMP54132 1417 aaPredicted RBP23.97■■□□□ 1.43
SVOP-202ENST00000548229 PXDNQ92626 1479 aa23.97■■□□□ 1.43
SVOP-202ENST00000548229 CDC42BPGQ6DT37 1551 aa23.96■■□□□ 1.43
SVOP-202ENST00000548229 MARF1Q9Y4F3 1742 aaKnown RBP23.96■■□□□ 1.43
SVOP-202ENST00000548229 SF3B2Q13435 895 aaKnown RBP23.95■■□□□ 1.42
SVOP-202ENST00000548229 XPCQ01831 940 aaPredicted RBP23.92■■□□□ 1.42
SVOP-202ENST00000548229 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.91■■□□□ 1.42
SVOP-202ENST00000548229 RALGAPBQ86X10 1494 aa23.9■■□□□ 1.42
SVOP-202ENST00000548229 NAIPQ13075 1403 aa23.9■■□□□ 1.42
SVOP-202ENST00000548229 SLIT2O94813 1529 aa23.89■■□□□ 1.42
SVOP-202ENST00000548229 SPATA31A3Q5VYP0 1347 aa23.88■■□□□ 1.41
SVOP-202ENST00000548229 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
SVOP-202ENST00000548229 CCDC144AA2RUR9 1427 aa23.86■■□□□ 1.41
SVOP-202ENST00000548229 PPLO60437 1756 aa23.86■■□□□ 1.41
SVOP-202ENST00000548229 TECPR2O15040 1411 aa23.85■■□□□ 1.41
SVOP-202ENST00000548229 NUTM2FA1L443 756 aa23.85■■□□□ 1.41
SVOP-202ENST00000548229 HAP1P54257 671 aaPredicted RBP23.85■■□□□ 1.41
SVOP-202ENST00000548229 SEPT12Q8IYM1 358 aa23.85■■□□□ 1.41
SVOP-202ENST00000548229 GLI3P10071 1580 aa23.84■■□□□ 1.41
SVOP-202ENST00000548229 WAPLQ7Z5K2 1190 aa23.84■■□□□ 1.41
SVOP-202ENST00000548229 DEFB132Q7Z7B7 95 aa23.84■■□□□ 1.41
SVOP-202ENST00000548229 STK26Q9P289 416 aa23.84■■□□□ 1.41
SVOP-202ENST00000548229 ABCC11Q96J66 1382 aa23.83■■□□□ 1.41
SVOP-202ENST00000548229 PSME1Q06323 249 aa23.83■■□□□ 1.41
SVOP-202ENST00000548229 VPS72Q15906 364 aa23.83■■□□□ 1.41
SVOP-202ENST00000548229 KRT28Q7Z3Y7 464 aa23.83■■□□□ 1.41
SVOP-202ENST00000548229 ONECUT3O60422 494 aaPredicted RBP23.82■■□□□ 1.4
SVOP-202ENST00000548229 KIF1AQ12756 1690 aa23.8■■□□□ 1.4
SVOP-202ENST00000548229 RRBP1Q9P2E9 1410 aaKnown RBP23.8■■□□□ 1.4
SVOP-202ENST00000548229 ADGRF5Q8IZF2 1346 aa23.8■■□□□ 1.4
SVOP-202ENST00000548229 ANKRD30BQ9BXX2 1392 aa23.79■■□□□ 1.4
SVOP-202ENST00000548229 KRT27Q7Z3Y8 459 aa23.79■■□□□ 1.4
SVOP-202ENST00000548229 CCDC9Q9Y3X0 531 aaKnown RBP23.79■■□□□ 1.4
SVOP-202ENST00000548229 USP32Q8NFA0 1604 aa23.79■■□□□ 1.4
SVOP-202ENST00000548229 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
SVOP-202ENST00000548229 SIRT1Q96EB6 747 aa23.78■■□□□ 1.4
SVOP-202ENST00000548229 LRP5O75197 1615 aa23.77■■□□□ 1.4
SVOP-202ENST00000548229 BRWD3Q6RI45 1802 aa23.76■■□□□ 1.39
SVOP-202ENST00000548229 BAG6P46379 1132 aa23.76■■□□□ 1.39
SVOP-202ENST00000548229 TNS3Q68CZ2 1445 aa23.76■■□□□ 1.39
SVOP-202ENST00000548229 PHF8Q9UPP1 1060 aa23.75■■□□□ 1.39
SVOP-202ENST00000548229 FMN2Q9NZ56 1722 aa23.74■■□□□ 1.39
SVOP-202ENST00000548229 RGL3Q3MIN7 710 aa23.74■■□□□ 1.39
SVOP-202ENST00000548229 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
SVOP-202ENST00000548229 ARHGEF10O15013 1369 aa23.74■■□□□ 1.39
SVOP-202ENST00000548229 SBNO1A3KN83 1393 aa23.73■■□□□ 1.39
SVOP-202ENST00000548229 PLEKHH1Q9ULM0 1364 aa23.73■■□□□ 1.39
SVOP-202ENST00000548229 KNDC1Q76NI1 1749 aa23.73■■□□□ 1.39
SVOP-202ENST00000548229 NWD2Q9ULI1 1742 aa23.73■■□□□ 1.39
SVOP-202ENST00000548229 YTHDC2Q9H6S0 1430 aaKnown RBP23.71■■□□□ 1.39
SVOP-202ENST00000548229 CABLES1Q8TDN4 633 aa23.71■■□□□ 1.39
SVOP-202ENST00000548229 A0A0G2JS52 829 aa23.7■■□□□ 1.38
SVOP-202ENST00000548229 MYT1Q01538 1121 aa23.7■■□□□ 1.38
SVOP-202ENST00000548229 LMOD2Q6P5Q4 547 aa23.7■■□□□ 1.38
SVOP-202ENST00000548229 PIK3C2GO75747 1445 aa23.68■■□□□ 1.38
SVOP-202ENST00000548229 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
SVOP-202ENST00000548229 HRCP23327 699 aa23.68■■□□□ 1.38
SVOP-202ENST00000548229 FAM83GA6ND36 823 aa23.67■■□□□ 1.38
SVOP-202ENST00000548229 PSDA5PKW4 1024 aaPredicted RBP23.66■■□□□ 1.38
SVOP-202ENST00000548229 NRXN1Q9ULB1 1477 aa23.66■■□□□ 1.38
SVOP-202ENST00000548229 PLCH1Q4KWH8 1693 aa23.66■■□□□ 1.38
SVOP-202ENST00000548229 PLEKHG5O94827 1062 aa23.64■■□□□ 1.37
SVOP-202ENST00000548229 FAM98CQ17RN3 349 aaKnown RBP23.64■■□□□ 1.37
SVOP-202ENST00000548229 C14orf93Q9H972 538 aaKnown RBP23.64■■□□□ 1.37
SVOP-202ENST00000548229 DHX57Q6P158 1386 aaKnown RBP23.64■■□□□ 1.37
SVOP-202ENST00000548229 IFT172Q9UG01 1749 aa23.62■■□□□ 1.37
SVOP-202ENST00000548229 BTG4Q9NY30 223 aa23.61■■□□□ 1.37
SVOP-202ENST00000548229 RGPD8O14715 1765 aaPredicted RBP23.6■■□□□ 1.37
SVOP-202ENST00000548229 ANKARQ7Z5J8 1434 aa23.59■■□□□ 1.37
SVOP-202ENST00000548229 EN1Q05925 392 aaPredicted RBP23.59■■□□□ 1.37
SVOP-202ENST00000548229 PRAM1Q96QH2 718 aa23.58■■□□□ 1.37
SVOP-202ENST00000548229 MPHOSPH9Q99550 1183 aa23.58■■□□□ 1.37
SVOP-202ENST00000548229 ABCA3Q99758 1704 aa23.58■■□□□ 1.37
SVOP-202ENST00000548229 PMFBP1Q8TBY8 1022 aa23.57■■□□□ 1.36
SVOP-202ENST00000548229 POGKQ9P215 609 aa23.57■■□□□ 1.36
SVOP-202ENST00000548229 GPRASP1Q5JY77 1395 aa23.56■■□□□ 1.36
SVOP-202ENST00000548229 DISP2A7MBM2 1401 aa23.56■■□□□ 1.36
SVOP-202ENST00000548229 R3HDM1Q15032 1099 aaKnown RBP23.55■■□□□ 1.36
SVOP-202ENST00000548229 RGPD1P0DJD0 1748 aa23.55■■□□□ 1.36
SVOP-202ENST00000548229 SPATA31A5Q5VU36 1347 aa23.55■■□□□ 1.36
SVOP-202ENST00000548229 SPATA31A7Q8IWB4 1347 aa23.55■■□□□ 1.36
SVOP-202ENST00000548229 SAFB2Q14151 953 aaKnown RBP eCLIP23.54■■□□□ 1.36
SVOP-202ENST00000548229 CFAP70Q5T0N1 1121 aa23.54■■□□□ 1.36
SVOP-202ENST00000548229 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
SVOP-202ENST00000548229 EIF3AQ14152 1382 aaKnown RBP23.53■■□□□ 1.36
SVOP-202ENST00000548229 COL14A1Q05707 1796 aaKnown RBP23.53■■□□□ 1.36
SVOP-202ENST00000548229 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
SVOP-202ENST00000548229 FAM196AQ6ZSG2 479 aa23.5■■□□□ 1.35
SVOP-202ENST00000548229 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms