RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 L3MBTL3Q96JM7 780 aaPredicted RBP9.05□□□□□ -0.96
PTPRR-207ENST00000548220 PREX1Q8TCU6 1659 aa9.04□□□□□ -0.96
PTPRR-207ENST00000548220 C3orf67Q6ZVT6 689 aa9.04□□□□□ -0.96
PTPRR-207ENST00000548220 PIK3C2BO00750 1634 aa9.04□□□□□ -0.96
PTPRR-207ENST00000548220 C3P01024 1663 aa9.03□□□□□ -0.96
PTPRR-207ENST00000548220 CFAP65Q6ZU64 1925 aaKnown RBP9.03□□□□□ -0.96
PTPRR-207ENST00000548220 PLA2R1Q13018 1463 aa9.03□□□□□ -0.96
PTPRR-207ENST00000548220 PDCD7Q8N8D1 485 aaKnown RBP9.03□□□□□ -0.96
PTPRR-207ENST00000548220 CCDC144AA2RUR9 1427 aa9.03□□□□□ -0.96
PTPRR-207ENST00000548220 ERVK-7P63135 1459 aa9.03□□□□□ -0.96
PTPRR-207ENST00000548220 NLRP1Q9C000 1473 aa9.03□□□□□ -0.96
PTPRR-207ENST00000548220 KIF1BO60333 1816 aa9.02□□□□□ -0.96
PTPRR-207ENST00000548220 PSEN1P49768 467 aa9.02□□□□□ -0.97
PTPRR-207ENST00000548220 MADDQ8WXG6 1647 aa9.01□□□□□ -0.97
PTPRR-207ENST00000548220 SLC24A1O60721 1099 aa9.01□□□□□ -0.97
PTPRR-207ENST00000548220 RPGRIP1LQ68CZ1 1315 aa9.01□□□□□ -0.97
PTPRR-207ENST00000548220 CEBPAP49715 358 aaPredicted RBP9□□□□□ -0.97
PTPRR-207ENST00000548220 PDAP1Q13442 181 aaKnown RBP9□□□□□ -0.97
PTPRR-207ENST00000548220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9□□□□□ -0.97
PTPRR-207ENST00000548220 SPOCK2Q92563 424 aa8.99□□□□□ -0.97
PTPRR-207ENST00000548220 SYNMO15061 1565 aa8.99□□□□□ -0.97
PTPRR-207ENST00000548220 RIMS1Q86UR5 1692 aaKnown RBP8.99□□□□□ -0.97
PTPRR-207ENST00000548220 PTPRMP28827 1452 aa8.99□□□□□ -0.97
PTPRR-207ENST00000548220 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
PTPRR-207ENST00000548220 SPATA31E1Q6ZUB1 1445 aa8.99□□□□□ -0.97
PTPRR-207ENST00000548220 TNRQ92752 1358 aa8.99□□□□□ -0.97
PTPRR-207ENST00000548220 ZFYVE9O95405 1425 aa8.98□□□□□ -0.97
PTPRR-207ENST00000548220 CLTCL1P53675 1640 aa8.97□□□□□ -0.97
PTPRR-207ENST00000548220 IDI1Q13907 227 aa8.97□□□□□ -0.97
PTPRR-207ENST00000548220 TMEM131LA2VDJ0 1609 aa8.96□□□□□ -0.97
PTPRR-207ENST00000548220 THEMISQ8N1K5 641 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-207ENST00000548220 CIZ1Q9ULV3 898 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-207ENST00000548220 ZNF142P52746 1687 aaPredicted RBP8.96□□□□□ -0.98
PTPRR-207ENST00000548220 ADGRB3O60242 1522 aa8.95□□□□□ -0.98
PTPRR-207ENST00000548220 A2ML1A8K2U0 1454 aa8.95□□□□□ -0.98
PTPRR-207ENST00000548220 FBXO31Q5XUX0 539 aaPredicted RBP8.95□□□□□ -0.98
PTPRR-207ENST00000548220 TONSLQ96HA7 1378 aa8.94□□□□□ -0.98
PTPRR-207ENST00000548220 VGFO15240 615 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-207ENST00000548220 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTPRR-207ENST00000548220 UBR1Q8IWV7 1749 aa8.94□□□□□ -0.98
PTPRR-207ENST00000548220 IFT172Q9UG01 1749 aa8.94□□□□□ -0.98
PTPRR-207ENST00000548220 UHRF1BP1Q6BDS2 1440 aa8.94□□□□□ -0.98
PTPRR-207ENST00000548220 G3V3G9 751 aa8.93□□□□□ -0.98
PTPRR-207ENST00000548220 PPP1R15AO75807 674 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-207ENST00000548220 ILDR1Q86SU0 546 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-207ENST00000548220 IFNLR1Q8IU57 520 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-207ENST00000548220 MARVELD3Q96A59 401 aa8.93□□□□□ -0.98
PTPRR-207ENST00000548220 SIN3AQ96ST3 1273 aa8.93□□□□□ -0.98
PTPRR-207ENST00000548220 MYOM2P54296 1465 aa8.93□□□□□ -0.98
PTPRR-207ENST00000548220 MYO3AQ8NEV4 1616 aa8.93□□□□□ -0.98
PTPRR-207ENST00000548220 UGGT1Q9NYU2 1555 aa8.93□□□□□ -0.98
PTPRR-207ENST00000548220 SLIT1O75093 1534 aa8.92□□□□□ -0.98
PTPRR-207ENST00000548220 PPLO60437 1756 aa8.92□□□□□ -0.98
PTPRR-207ENST00000548220 CEP170BQ9Y4F5 1589 aaPredicted RBP8.92□□□□□ -0.98
PTPRR-207ENST00000548220 KIAA1210Q9ULL0 1709 aa8.92□□□□□ -0.98
PTPRR-207ENST00000548220 ARHGAP23Q9P227 1491 aa8.91□□□□□ -0.98
PTPRR-207ENST00000548220 L3MBTL2Q969R5 705 aa8.91□□□□□ -0.98
PTPRR-207ENST00000548220 CABP2Q9NPB3 220 aa8.91□□□□□ -0.98
PTPRR-207ENST00000548220 TMEM2Q9UHN6 1383 aa8.91□□□□□ -0.98
PTPRR-207ENST00000548220 MYO5BQ9ULV0 1848 aa8.91□□□□□ -0.98
PTPRR-207ENST00000548220 NRXN1Q9ULB1 1477 aa8.91□□□□□ -0.98
PTPRR-207ENST00000548220 EMP3P54852 163 aa8.9□□□□□ -0.98
PTPRR-207ENST00000548220 NEUROD1Q13562 356 aa8.9□□□□□ -0.98
PTPRR-207ENST00000548220 NEXMIFQ5QGS0 1516 aa8.89□□□□□ -0.99
PTPRR-207ENST00000548220 LAMC1P11047 1609 aa8.89□□□□□ -0.99
PTPRR-207ENST00000548220 HSPA2P54652 639 aa8.88□□□□□ -0.99
PTPRR-207ENST00000548220 DCAF11Q8TEB1 546 aa8.88□□□□□ -0.99
PTPRR-207ENST00000548220 BOLA1Q9Y3E2 137 aa8.88□□□□□ -0.99
PTPRR-207ENST00000548220 EID1Q9Y6B2 187 aa8.88□□□□□ -0.99
PTPRR-207ENST00000548220 SPNS2Q8IVW8 549 aa8.87□□□□□ -0.99
PTPRR-207ENST00000548220 MED14O60244 1454 aa8.87□□□□□ -0.99
PTPRR-207ENST00000548220 PRAG1Q86YV5 1406 aa8.87□□□□□ -0.99
PTPRR-207ENST00000548220 RIMS2Q9UQ26 1411 aa8.87□□□□□ -0.99
PTPRR-207ENST00000548220 SETBP1Q9Y6X0 1596 aa8.87□□□□□ -0.99
PTPRR-207ENST00000548220 MMRN1Q13201 1228 aa8.86□□□□□ -0.99
PTPRR-207ENST00000548220 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
PTPRR-207ENST00000548220 ZNF326Q5BKZ1 582 aaKnown RBP8.86□□□□□ -0.99
PTPRR-207ENST00000548220 ANKLE2Q86XL3 938 aa8.86□□□□□ -0.99
PTPRR-207ENST00000548220 PIK3C2GO75747 1445 aa8.86□□□□□ -0.99
PTPRR-207ENST00000548220 GPRASP1Q5JY77 1395 aa8.86□□□□□ -0.99
PTPRR-207ENST00000548220 PIK3R4Q99570 1358 aa8.86□□□□□ -0.99
PTPRR-207ENST00000548220 PLEKHG1Q9ULL1 1385 aa8.86□□□□□ -0.99
PTPRR-207ENST00000548220 C14orf93Q9H972 538 aaKnown RBP8.86□□□□□ -0.99
PTPRR-207ENST00000548220 DIP2AQ14689 1571 aa8.85□□□□□ -0.99
PTPRR-207ENST00000548220 SCAF11Q99590 1463 aaKnown RBP8.85□□□□□ -0.99
PTPRR-207ENST00000548220 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
PTPRR-207ENST00000548220 POLR1AO95602 1720 aaPredicted RBP8.84□□□□□ -0.99
PTPRR-207ENST00000548220 RALGAPBQ86X10 1494 aa8.84□□□□□ -0.99
PTPRR-207ENST00000548220 TRPM1Q7Z4N2 1603 aa8.84□□□□□ -0.99
PTPRR-207ENST00000548220 DPY19L2Q6NUT2 758 aa8.84□□□□□ -0.99
PTPRR-207ENST00000548220 TXNDC2Q86VQ3 553 aa8.84□□□□□ -0.99
PTPRR-207ENST00000548220 TBX22Q9Y458 520 aa8.84□□□□□ -0.99
PTPRR-207ENST00000548220 LMTK3Q96Q04 1460 aa8.83□□□□□ -1
PTPRR-207ENST00000548220 SIRT1Q96EB6 747 aa8.83□□□□□ -1
PTPRR-207ENST00000548220 HS3ST6Q96QI5 342 aa8.82□□□□□ -1
PTPRR-207ENST00000548220 ADGRF5Q8IZF2 1346 aa8.82□□□□□ -1
PTPRR-207ENST00000548220 FAM205CA6NFA0 338 aa8.81□□□□□ -1
PTPRR-207ENST00000548220 LTKP29376 864 aa8.81□□□□□ -1
PTPRR-207ENST00000548220 KDM2AQ9Y2K7 1162 aa8.81□□□□□ -1
PTPRR-207ENST00000548220 ALKQ9UM73 1620 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms