RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
R3HDM2-212ENST00000548161 PPLO60437 1756 aa12.75□□□□□ -0.37
R3HDM2-212ENST00000548161 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
R3HDM2-212ENST00000548161 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
R3HDM2-212ENST00000548161 ATAD2Q6PL18 1390 aa12.74□□□□□ -0.37
R3HDM2-212ENST00000548161 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
R3HDM2-212ENST00000548161 ATRNO75882 1429 aa12.73□□□□□ -0.37
R3HDM2-212ENST00000548161 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
R3HDM2-212ENST00000548161 FOXO3O43524 673 aa12.73□□□□□ -0.37
R3HDM2-212ENST00000548161 FOXD1Q16676 465 aa12.73□□□□□ -0.37
R3HDM2-212ENST00000548161 MYOM2P54296 1465 aa12.72□□□□□ -0.37
R3HDM2-212ENST00000548161 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
R3HDM2-212ENST00000548161 STK26Q9P289 416 aa12.72□□□□□ -0.37
R3HDM2-212ENST00000548161 CDC42BPGQ6DT37 1551 aa12.72□□□□□ -0.37
R3HDM2-212ENST00000548161 PXDNQ92626 1479 aa12.72□□□□□ -0.37
R3HDM2-212ENST00000548161 RGL3Q3MIN7 710 aa12.71□□□□□ -0.37
R3HDM2-212ENST00000548161 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.38
R3HDM2-212ENST00000548161 TECPR2O15040 1411 aa12.71□□□□□ -0.38
R3HDM2-212ENST00000548161 LRPPRCP42704 1394 aaKnown RBP12.7□□□□□ -0.38
R3HDM2-212ENST00000548161 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
R3HDM2-212ENST00000548161 XPCQ01831 940 aaPredicted RBP12.7□□□□□ -0.38
R3HDM2-212ENST00000548161 CCDC144AA2RUR9 1427 aa12.7□□□□□ -0.38
R3HDM2-212ENST00000548161 SPATA31E1Q6ZUB1 1445 aa12.7□□□□□ -0.38
R3HDM2-212ENST00000548161 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
R3HDM2-212ENST00000548161 NUTM2FA1L443 756 aa12.69□□□□□ -0.38
R3HDM2-212ENST00000548161 TMEM132EQ6IEE7 984 aa12.69□□□□□ -0.38
R3HDM2-212ENST00000548161 CCDC125Q86Z20 511 aa12.69□□□□□ -0.38
R3HDM2-212ENST00000548161 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
R3HDM2-212ENST00000548161 MPHOSPH9Q99550 1183 aa12.68□□□□□ -0.38
R3HDM2-212ENST00000548161 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
R3HDM2-212ENST00000548161 MARF1Q9Y4F3 1742 aaKnown RBP12.67□□□□□ -0.38
R3HDM2-212ENST00000548161 PLEKHH1Q9ULM0 1364 aa12.67□□□□□ -0.38
R3HDM2-212ENST00000548161 SPATA31A3Q5VYP0 1347 aa12.66□□□□□ -0.38
R3HDM2-212ENST00000548161 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
R3HDM2-212ENST00000548161 PIK3C2GO75747 1445 aa12.65□□□□□ -0.38
R3HDM2-212ENST00000548161 KRT28Q7Z3Y7 464 aa12.65□□□□□ -0.38
R3HDM2-212ENST00000548161 UNC5CLQ8IV45 518 aa12.65□□□□□ -0.38
R3HDM2-212ENST00000548161 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
R3HDM2-212ENST00000548161 YTHDC2Q9H6S0 1430 aaKnown RBP12.64□□□□□ -0.39
R3HDM2-212ENST00000548161 C14orf93Q9H972 538 aaKnown RBP12.64□□□□□ -0.39
R3HDM2-212ENST00000548161 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
R3HDM2-212ENST00000548161 SLIT2O94813 1529 aa12.63□□□□□ -0.39
R3HDM2-212ENST00000548161 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
R3HDM2-212ENST00000548161 RALGAPBQ86X10 1494 aa12.62□□□□□ -0.39
R3HDM2-212ENST00000548161 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
R3HDM2-212ENST00000548161 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
R3HDM2-212ENST00000548161 KIF1AQ12756 1690 aa12.61□□□□□ -0.39
R3HDM2-212ENST00000548161 PSME1Q06323 249 aa12.61□□□□□ -0.39
R3HDM2-212ENST00000548161 GLI3P10071 1580 aa12.6□□□□□ -0.39
R3HDM2-212ENST00000548161 DHX57Q6P158 1386 aaKnown RBP12.6□□□□□ -0.39
R3HDM2-212ENST00000548161 CFAP70Q5T0N1 1121 aa12.6□□□□□ -0.39
R3HDM2-212ENST00000548161 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
R3HDM2-212ENST00000548161 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
R3HDM2-212ENST00000548161 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
R3HDM2-212ENST00000548161 VPS72Q15906 364 aa12.59□□□□□ -0.39
R3HDM2-212ENST00000548161 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
R3HDM2-212ENST00000548161 TNS3Q68CZ2 1445 aa12.59□□□□□ -0.39
R3HDM2-212ENST00000548161 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.39
R3HDM2-212ENST00000548161 SBNO1A3KN83 1393 aa12.58□□□□□ -0.4
R3HDM2-212ENST00000548161 BLMP54132 1417 aaPredicted RBP12.58□□□□□ -0.4
R3HDM2-212ENST00000548161 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
R3HDM2-212ENST00000548161 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
R3HDM2-212ENST00000548161 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
R3HDM2-212ENST00000548161 USP32Q8NFA0 1604 aa12.58□□□□□ -0.4
R3HDM2-212ENST00000548161 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
R3HDM2-212ENST00000548161 BRWD3Q6RI45 1802 aa12.56□□□□□ -0.4
R3HDM2-212ENST00000548161 FAM83GA6ND36 823 aa12.56□□□□□ -0.4
R3HDM2-212ENST00000548161 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
R3HDM2-212ENST00000548161 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
R3HDM2-212ENST00000548161 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
R3HDM2-212ENST00000548161 DEFB132Q7Z7B7 95 aa12.55□□□□□ -0.4
R3HDM2-212ENST00000548161 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
R3HDM2-212ENST00000548161 POGKQ9P215 609 aa12.55□□□□□ -0.4
R3HDM2-212ENST00000548161 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
R3HDM2-212ENST00000548161 SF3B2Q13435 895 aaKnown RBP12.54□□□□□ -0.4
R3HDM2-212ENST00000548161 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
R3HDM2-212ENST00000548161 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
R3HDM2-212ENST00000548161 ANKARQ7Z5J8 1434 aa12.54□□□□□ -0.4
R3HDM2-212ENST00000548161 DLC1Q96QB1 1528 aa12.53□□□□□ -0.4
R3HDM2-212ENST00000548161 PLCH1Q4KWH8 1693 aa12.52□□□□□ -0.4
R3HDM2-212ENST00000548161 HIRIP3Q9BW71 556 aaPredicted RBP12.51□□□□□ -0.41
R3HDM2-212ENST00000548161 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
R3HDM2-212ENST00000548161 TRAK1Q9UPV9 953 aa12.51□□□□□ -0.41
R3HDM2-212ENST00000548161 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
R3HDM2-212ENST00000548161 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
R3HDM2-212ENST00000548161 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
R3HDM2-212ENST00000548161 GPRASP1Q5JY77 1395 aa12.49□□□□□ -0.41
R3HDM2-212ENST00000548161 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
R3HDM2-212ENST00000548161 PRR36Q9H6K5 1346 aa12.49□□□□□ -0.41
R3HDM2-212ENST00000548161 WASLO00401 505 aaPredicted RBP12.49□□□□□ -0.41
R3HDM2-212ENST00000548161 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
R3HDM2-212ENST00000548161 TRPM3Q9HCF6 1732 aaPredicted RBP12.48□□□□□ -0.41
R3HDM2-212ENST00000548161 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
R3HDM2-212ENST00000548161 RAB3GAP2Q9H2M9 1393 aa12.48□□□□□ -0.41
R3HDM2-212ENST00000548161 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
R3HDM2-212ENST00000548161 A0A0G2JS52 829 aa12.47□□□□□ -0.41
R3HDM2-212ENST00000548161 BAG6P46379 1132 aa12.47□□□□□ -0.41
R3HDM2-212ENST00000548161 MYT1Q01538 1121 aa12.47□□□□□ -0.41
R3HDM2-212ENST00000548161 DCAF11Q8TEB1 546 aa12.47□□□□□ -0.41
R3HDM2-212ENST00000548161 STAC3Q96MF2 364 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms