RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 PXDNQ92626 1479 aa18.59■□□□□ 0.57
GCN1-204ENST00000548132 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
GCN1-204ENST00000548132 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.57
GCN1-204ENST00000548132 ARHGEF28Q8N1W1 1705 aaKnown RBP18.58■□□□□ 0.57
GCN1-204ENST00000548132 ABCA3Q99758 1704 aa18.58■□□□□ 0.57
GCN1-204ENST00000548132 SPATA31A6Q5VVP1 1343 aa18.58■□□□□ 0.57
GCN1-204ENST00000548132 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
GCN1-204ENST00000548132 DLC1Q96QB1 1528 aa18.57■□□□□ 0.56
GCN1-204ENST00000548132 RGL3Q3MIN7 710 aa18.56■□□□□ 0.56
GCN1-204ENST00000548132 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
GCN1-204ENST00000548132 ACIN1Q9UKV3 1341 aaKnown RBP18.51■□□□□ 0.55
GCN1-204ENST00000548132 SOS2Q07890 1332 aaPredicted RBP18.5■□□□□ 0.55
GCN1-204ENST00000548132 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
GCN1-204ENST00000548132 ORAI2Q96SN7 254 aa18.5■□□□□ 0.55
GCN1-204ENST00000548132 TRPM3Q9HCF6 1732 aaPredicted RBP18.49■□□□□ 0.55
GCN1-204ENST00000548132 KIAA1210Q9ULL0 1709 aa18.49■□□□□ 0.55
GCN1-204ENST00000548132 DHX57Q6P158 1386 aaKnown RBP18.48■□□□□ 0.55
GCN1-204ENST00000548132 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
GCN1-204ENST00000548132 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
GCN1-204ENST00000548132 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
GCN1-204ENST00000548132 C14orf93Q9H972 538 aaKnown RBP18.47■□□□□ 0.55
GCN1-204ENST00000548132 TOPAZ1Q8N9V7 1692 aa18.46■□□□□ 0.55
GCN1-204ENST00000548132 CFAP70Q5T0N1 1121 aa18.45■□□□□ 0.54
GCN1-204ENST00000548132 STK26Q9P289 416 aa18.45■□□□□ 0.54
GCN1-204ENST00000548132 CDK12Q9NYV4 1490 aaPredicted RBP18.44■□□□□ 0.54
GCN1-204ENST00000548132 ALS2Q96Q42 1657 aa18.44■□□□□ 0.54
GCN1-204ENST00000548132 PLCH1Q4KWH8 1693 aa18.43■□□□□ 0.54
GCN1-204ENST00000548132 ITSN1Q15811 1721 aa18.43■□□□□ 0.54
GCN1-204ENST00000548132 HRCP23327 699 aa18.42■□□□□ 0.54
GCN1-204ENST00000548132 RGS12O14924 1447 aa18.41■□□□□ 0.54
GCN1-204ENST00000548132 TULP4Q9NRJ4 1543 aa18.41■□□□□ 0.54
GCN1-204ENST00000548132 LRRC59Q96AG4 307 aaKnown RBP18.41■□□□□ 0.54
GCN1-204ENST00000548132 NUTM2BA6NNL0 878 aaPredicted RBP18.4■□□□□ 0.54
GCN1-204ENST00000548132 NUTM2EB1AL46 878 aaPredicted RBP18.4■□□□□ 0.54
GCN1-204ENST00000548132 NUTM2AQ8IVF1 878 aaPredicted RBP18.4■□□□□ 0.54
GCN1-204ENST00000548132 AFF2P51816 1311 aa18.4■□□□□ 0.54
GCN1-204ENST00000548132 MEX3CQ5U5Q3 659 aaKnown RBP18.39■□□□□ 0.53
GCN1-204ENST00000548132 SIRT1Q96EB6 747 aa18.38■□□□□ 0.53
GCN1-204ENST00000548132 NPHP3Q7Z494 1330 aa18.38■□□□□ 0.53
GCN1-204ENST00000548132 ANKARQ7Z5J8 1434 aa18.38■□□□□ 0.53
GCN1-204ENST00000548132 ATP7BP35670 1465 aa18.37■□□□□ 0.53
GCN1-204ENST00000548132 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
GCN1-204ENST00000548132 NUTM2FA1L443 756 aa18.36■□□□□ 0.53
GCN1-204ENST00000548132 TNS3Q68CZ2 1445 aa18.36■□□□□ 0.53
GCN1-204ENST00000548132 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
GCN1-204ENST00000548132 TRPM1Q7Z4N2 1603 aa18.35■□□□□ 0.53
GCN1-204ENST00000548132 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
GCN1-204ENST00000548132 ESCO1Q5FWF5 840 aa18.35■□□□□ 0.53
GCN1-204ENST00000548132 ZNF772Q68DY9 489 aaPredicted RBP18.35■□□□□ 0.53
GCN1-204ENST00000548132 PRAM1Q96QH2 718 aa18.35■□□□□ 0.53
GCN1-204ENST00000548132 GLI3P10071 1580 aa18.34■□□□□ 0.53
GCN1-204ENST00000548132 ATRNO75882 1429 aa18.34■□□□□ 0.53
GCN1-204ENST00000548132 QRICH2Q9H0J4 1663 aa18.34■□□□□ 0.53
GCN1-204ENST00000548132 EP400Q96L91 3159 aa18.33■□□□□ 0.53
GCN1-204ENST00000548132 C8orf37Q96NL8 207 aa18.33■□□□□ 0.52
GCN1-204ENST00000548132 PHRF1Q9P1Y6 1649 aaKnown RBP18.33■□□□□ 0.52
GCN1-204ENST00000548132 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.52
GCN1-204ENST00000548132 PRR36Q9H6K5 1346 aa18.32■□□□□ 0.52
GCN1-204ENST00000548132 FOXO3O43524 673 aa18.32■□□□□ 0.52
GCN1-204ENST00000548132 SAFB2Q14151 953 aaKnown RBP eCLIP18.31■□□□□ 0.52
GCN1-204ENST00000548132 DCAF11Q8TEB1 546 aa18.31■□□□□ 0.52
GCN1-204ENST00000548132 SLIT2O94813 1529 aa18.31■□□□□ 0.52
GCN1-204ENST00000548132 SPATA31A3Q5VYP0 1347 aa18.3■□□□□ 0.52
GCN1-204ENST00000548132 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
GCN1-204ENST00000548132 ADAMTS2O95450 1211 aa18.29■□□□□ 0.52
GCN1-204ENST00000548132 TRAK1Q9UPV9 953 aa18.27■□□□□ 0.52
GCN1-204ENST00000548132 KDM2AQ9Y2K7 1162 aa18.27■□□□□ 0.52
GCN1-204ENST00000548132 SBNO1A3KN83 1393 aa18.27■□□□□ 0.51
GCN1-204ENST00000548132 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
GCN1-204ENST00000548132 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
GCN1-204ENST00000548132 PHF8Q9UPP1 1060 aa18.25■□□□□ 0.51
GCN1-204ENST00000548132 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
GCN1-204ENST00000548132 RXRBP28702 533 aa18.24■□□□□ 0.51
GCN1-204ENST00000548132 COL14A1Q05707 1796 aaKnown RBP18.24■□□□□ 0.51
GCN1-204ENST00000548132 NRKQ7Z2Y5 1582 aa18.22■□□□□ 0.51
GCN1-204ENST00000548132 EIF3AQ14152 1382 aaKnown RBP18.22■□□□□ 0.51
GCN1-204ENST00000548132 STAC3Q96MF2 364 aa18.22■□□□□ 0.51
GCN1-204ENST00000548132 RALGAPBQ86X10 1494 aa18.21■□□□□ 0.51
GCN1-204ENST00000548132 RBM6P78332 1123 aaKnown RBP18.21■□□□□ 0.51
GCN1-204ENST00000548132 KRT28Q7Z3Y7 464 aa18.21■□□□□ 0.51
GCN1-204ENST00000548132 UPF1Q92900 1129 aaKnown RBP eCLIP18.21■□□□□ 0.51
GCN1-204ENST00000548132 NGLY1Q96IV0 654 aa18.21■□□□□ 0.51
GCN1-204ENST00000548132 POGKQ9P215 609 aa18.21■□□□□ 0.51
GCN1-204ENST00000548132 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
GCN1-204ENST00000548132 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
GCN1-204ENST00000548132 WASLO00401 505 aaPredicted RBP18.19■□□□□ 0.5
GCN1-204ENST00000548132 USP21Q9UK80 565 aa18.19■□□□□ 0.5
GCN1-204ENST00000548132 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
GCN1-204ENST00000548132 NBPF1Q3BBV0 1214 aa18.17■□□□□ 0.5
GCN1-204ENST00000548132 THSD7AQ9UPZ6 1657 aa18.17■□□□□ 0.5
GCN1-204ENST00000548132 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
GCN1-204ENST00000548132 LMO7Q8WWI1 1683 aa18.16■□□□□ 0.5
GCN1-204ENST00000548132 POLR3AO14802 1390 aaPredicted RBP18.16■□□□□ 0.5
GCN1-204ENST00000548132 CABLES1Q8TDN4 633 aa18.15■□□□□ 0.5
GCN1-204ENST00000548132 TRPC5Q9UL62 973 aaPredicted RBP18.15■□□□□ 0.5
GCN1-204ENST00000548132 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
GCN1-204ENST00000548132 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
GCN1-204ENST00000548132 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
GCN1-204ENST00000548132 MON2Q7Z3U7 1717 aa18.11■□□□□ 0.49
GCN1-204ENST00000548132 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms