RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 CLTCL1P53675 1640 aa12.55□□□□□ -0.4
PTCH1-214ENST00000547615 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
PTCH1-214ENST00000547615 MYOM2P54296 1465 aa12.53□□□□□ -0.4
PTCH1-214ENST00000547615 KIF1AQ12756 1690 aa12.51□□□□□ -0.41
PTCH1-214ENST00000547615 BLMP54132 1417 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-214ENST00000547615 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
PTCH1-214ENST00000547615 PPLO60437 1756 aa12.48□□□□□ -0.41
PTCH1-214ENST00000547615 ROBO2Q9HCK4 1378 aa12.48□□□□□ -0.41
PTCH1-214ENST00000547615 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
PTCH1-214ENST00000547615 PXDNQ92626 1479 aa12.47□□□□□ -0.41
PTCH1-214ENST00000547615 CCDC144AA2RUR9 1427 aa12.47□□□□□ -0.41
PTCH1-214ENST00000547615 DDX17Q92841 729 aaKnown RBP12.47□□□□□ -0.41
PTCH1-214ENST00000547615 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-214ENST00000547615 LRP5O75197 1615 aa12.47□□□□□ -0.41
PTCH1-214ENST00000547615 KNDC1Q76NI1 1749 aa12.46□□□□□ -0.41
PTCH1-214ENST00000547615 ORAI2Q96SN7 254 aa12.46□□□□□ -0.41
PTCH1-214ENST00000547615 TECPR2O15040 1411 aa12.45□□□□□ -0.42
PTCH1-214ENST00000547615 ESCO1Q5FWF5 840 aa12.45□□□□□ -0.42
PTCH1-214ENST00000547615 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
PTCH1-214ENST00000547615 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
PTCH1-214ENST00000547615 SLIT2O94813 1529 aa12.44□□□□□ -0.42
PTCH1-214ENST00000547615 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
PTCH1-214ENST00000547615 ITGAEP38570 1179 aa12.43□□□□□ -0.42
PTCH1-214ENST00000547615 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
PTCH1-214ENST00000547615 RALGAPBQ86X10 1494 aa12.42□□□□□ -0.42
PTCH1-214ENST00000547615 NAIPQ13075 1403 aa12.42□□□□□ -0.42
PTCH1-214ENST00000547615 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
PTCH1-214ENST00000547615 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
PTCH1-214ENST00000547615 GLI3P10071 1580 aa12.41□□□□□ -0.42
PTCH1-214ENST00000547615 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
PTCH1-214ENST00000547615 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-214ENST00000547615 PSME1Q06323 249 aa12.4□□□□□ -0.42
PTCH1-214ENST00000547615 ARHGEF10O15013 1369 aa12.4□□□□□ -0.42
PTCH1-214ENST00000547615 FOXO3O43524 673 aa12.39□□□□□ -0.43
PTCH1-214ENST00000547615 EP400Q96L91 3159 aa12.39□□□□□ -0.43
PTCH1-214ENST00000547615 ABCC11Q96J66 1382 aa12.39□□□□□ -0.43
PTCH1-214ENST00000547615 PLCH1Q4KWH8 1693 aa12.38□□□□□ -0.43
PTCH1-214ENST00000547615 SPATA31A3Q5VYP0 1347 aa12.38□□□□□ -0.43
PTCH1-214ENST00000547615 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
PTCH1-214ENST00000547615 IFT172Q9UG01 1749 aa12.38□□□□□ -0.43
PTCH1-214ENST00000547615 BAG6P46379 1132 aa12.38□□□□□ -0.43
PTCH1-214ENST00000547615 VPS72Q15906 364 aa12.38□□□□□ -0.43
PTCH1-214ENST00000547615 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
PTCH1-214ENST00000547615 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
PTCH1-214ENST00000547615 SBNO1A3KN83 1393 aa12.37□□□□□ -0.43
PTCH1-214ENST00000547615 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
PTCH1-214ENST00000547615 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
PTCH1-214ENST00000547615 SRCAPQ6ZRS2 3230 aa12.36□□□□□ -0.43
PTCH1-214ENST00000547615 EIF3AQ14152 1382 aaKnown RBP12.35□□□□□ -0.43
PTCH1-214ENST00000547615 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
PTCH1-214ENST00000547615 PIK3C2GO75747 1445 aa12.35□□□□□ -0.43
PTCH1-214ENST00000547615 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
PTCH1-214ENST00000547615 ONECUT3O60422 494 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-214ENST00000547615 KRT27Q7Z3Y8 459 aa12.34□□□□□ -0.43
PTCH1-214ENST00000547615 SEPT12Q8IYM1 358 aa12.34□□□□□ -0.43
PTCH1-214ENST00000547615 NRXN1Q9ULB1 1477 aa12.34□□□□□ -0.43
PTCH1-214ENST00000547615 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
PTCH1-214ENST00000547615 CCDC9Q9Y3X0 531 aaKnown RBP12.33□□□□□ -0.44
PTCH1-214ENST00000547615 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
PTCH1-214ENST00000547615 YTHDC2Q9H6S0 1430 aaKnown RBP12.33□□□□□ -0.44
PTCH1-214ENST00000547615 COL14A1Q05707 1796 aaKnown RBP12.32□□□□□ -0.44
PTCH1-214ENST00000547615 DISP2A7MBM2 1401 aa12.31□□□□□ -0.44
PTCH1-214ENST00000547615 SPATA31E1Q6ZUB1 1445 aa12.31□□□□□ -0.44
PTCH1-214ENST00000547615 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-214ENST00000547615 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
PTCH1-214ENST00000547615 NRAPQ86VF7 1730 aa12.31□□□□□ -0.44
PTCH1-214ENST00000547615 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
PTCH1-214ENST00000547615 A0A0G2JS52 829 aa12.3□□□□□ -0.44
PTCH1-214ENST00000547615 MYT1Q01538 1121 aa12.3□□□□□ -0.44
PTCH1-214ENST00000547615 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
PTCH1-214ENST00000547615 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
PTCH1-214ENST00000547615 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
PTCH1-214ENST00000547615 STK26Q9P289 416 aa12.29□□□□□ -0.44
PTCH1-214ENST00000547615 ADGRF5Q8IZF2 1346 aa12.29□□□□□ -0.44
PTCH1-214ENST00000547615 WAPLQ7Z5K2 1190 aa12.28□□□□□ -0.44
PTCH1-214ENST00000547615 GPRASP1Q5JY77 1395 aa12.28□□□□□ -0.44
PTCH1-214ENST00000547615 NUTM2FA1L443 756 aa12.27□□□□□ -0.45
PTCH1-214ENST00000547615 RGPD8O14715 1765 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-214ENST00000547615 HRCP23327 699 aa12.26□□□□□ -0.45
PTCH1-214ENST00000547615 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
PTCH1-214ENST00000547615 PLEKHH1Q9ULM0 1364 aa12.26□□□□□ -0.45
PTCH1-214ENST00000547615 ALS2Q96Q42 1657 aa12.25□□□□□ -0.45
PTCH1-214ENST00000547615 THSD7AQ9UPZ6 1657 aa12.25□□□□□ -0.45
PTCH1-214ENST00000547615 ITSN1Q15811 1721 aa12.25□□□□□ -0.45
PTCH1-214ENST00000547615 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-214ENST00000547615 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-214ENST00000547615 RGL3Q3MIN7 710 aa12.24□□□□□ -0.45
PTCH1-214ENST00000547615 C14orf93Q9H972 538 aaKnown RBP12.24□□□□□ -0.45
PTCH1-214ENST00000547615 TNS1Q9HBL0 1735 aaKnown RBP12.24□□□□□ -0.45
PTCH1-214ENST00000547615 TULP4Q9NRJ4 1543 aa12.23□□□□□ -0.45
PTCH1-214ENST00000547615 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
PTCH1-214ENST00000547615 BTG4Q9NY30 223 aa12.23□□□□□ -0.45
PTCH1-214ENST00000547615 POGKQ9P215 609 aa12.23□□□□□ -0.45
PTCH1-214ENST00000547615 ATP7BP35670 1465 aa12.22□□□□□ -0.45
PTCH1-214ENST00000547615 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
PTCH1-214ENST00000547615 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
PTCH1-214ENST00000547615 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
PTCH1-214ENST00000547615 SPATA31A5Q5VU36 1347 aa12.21□□□□□ -0.45
PTCH1-214ENST00000547615 SPATA31A7Q8IWB4 1347 aa12.21□□□□□ -0.45
PTCH1-214ENST00000547615 CRYBG1Q9Y4K1 1723 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms