RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 THAP11Q96EK4 314 aa8.03□□□□□ -1.12
HCFC2-203ENST00000547194 TRIM32Q13049 653 aa8.02□□□□□ -1.13
HCFC2-203ENST00000547194 NLRP7Q8WX94 980 aa8.02□□□□□ -1.13
HCFC2-203ENST00000547194 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
HCFC2-203ENST00000547194 FCHSD2O94868 740 aa8□□□□□ -1.13
HCFC2-203ENST00000547194 ATP6V1AP38606 617 aa8□□□□□ -1.13
HCFC2-203ENST00000547194 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
HCFC2-203ENST00000547194 OATP04181 439 aa7.99□□□□□ -1.13
HCFC2-203ENST00000547194 BMP1P13497 986 aa7.99□□□□□ -1.13
HCFC2-203ENST00000547194 NXF1Q9UBU9 619 aaKnown RBP7.99□□□□□ -1.13
HCFC2-203ENST00000547194 SUZ12Q15022 739 aaKnown RBP7.98□□□□□ -1.13
HCFC2-203ENST00000547194 CCDC24Q8N4L8 307 aa7.98□□□□□ -1.13
HCFC2-203ENST00000547194 METTL3Q86U44 580 aaKnown RBP7.97□□□□□ -1.13
HCFC2-203ENST00000547194 IRF7Q92985 503 aa7.97□□□□□ -1.13
HCFC2-203ENST00000547194 ALDH1A1P00352 501 aa7.96□□□□□ -1.14
HCFC2-203ENST00000547194 BRICD5Q6PL45 260 aa7.96□□□□□ -1.14
HCFC2-203ENST00000547194 LORP23490 312 aaPredicted RBP7.95□□□□□ -1.14
HCFC2-203ENST00000547194 TSHZ2Q9NRE2 1034 aa7.95□□□□□ -1.14
HCFC2-203ENST00000547194 KCNV2Q8TDN2 545 aa7.94□□□□□ -1.14
HCFC2-203ENST00000547194 REPIN1Q9BWE0 567 aaKnown RBP7.94□□□□□ -1.14
HCFC2-203ENST00000547194 MSS51Q4VC12 460 aa7.93□□□□□ -1.14
HCFC2-203ENST00000547194 RC3H1Q5TC82 1133 aaKnown RBP7.93□□□□□ -1.14
HCFC2-203ENST00000547194 ARHGEF1Q92888 912 aaKnown RBP7.93□□□□□ -1.14
HCFC2-203ENST00000547194 DAXXQ9UER7 740 aaPredicted RBP7.93□□□□□ -1.14
HCFC2-203ENST00000547194 ERBB4Q15303 1308 aa7.93□□□□□ -1.14
HCFC2-203ENST00000547194 GCGRP47871 477 aa7.92□□□□□ -1.14
HCFC2-203ENST00000547194 TRIM46Q7Z4K8 759 aa7.91□□□□□ -1.14
HCFC2-203ENST00000547194 SKOR1P84550 965 aa7.9□□□□□ -1.14
HCFC2-203ENST00000547194 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.14
HCFC2-203ENST00000547194 H3BM21 787 aa7.89□□□□□ -1.15
HCFC2-203ENST00000547194 CAPN5O15484 640 aaPredicted RBP7.89□□□□□ -1.15
HCFC2-203ENST00000547194 SALL2Q9Y467 1007 aaPredicted RBP7.89□□□□□ -1.15
HCFC2-203ENST00000547194 PLCB2Q00722 1185 aa7.88□□□□□ -1.15
HCFC2-203ENST00000547194 GRIPAP1Q4V328 841 aa7.88□□□□□ -1.15
HCFC2-203ENST00000547194 WASF2Q9Y6W5 498 aa7.88□□□□□ -1.15
HCFC2-203ENST00000547194 HIC1Q14526 733 aa7.87□□□□□ -1.15
HCFC2-203ENST00000547194 SULF1Q8IWU6 871 aa7.87□□□□□ -1.15
HCFC2-203ENST00000547194 SEMA3EO15041 775 aa7.86□□□□□ -1.15
HCFC2-203ENST00000547194 MMP16P51512 607 aa7.86□□□□□ -1.15
HCFC2-203ENST00000547194 Q3C1V9 767 aa7.86□□□□□ -1.15
HCFC2-203ENST00000547194 EHBP1Q8NDI1 1231 aa7.85□□□□□ -1.15
HCFC2-203ENST00000547194 USB1Q9BQ65 265 aaKnown RBP7.85□□□□□ -1.15
HCFC2-203ENST00000547194 SOBPA7XYQ1 873 aa7.84□□□□□ -1.15
HCFC2-203ENST00000547194 RBM26Q5T8P6 1007 aaKnown RBP7.84□□□□□ -1.15
HCFC2-203ENST00000547194 NPAS3Q8IXF0 933 aa7.84□□□□□ -1.15
HCFC2-203ENST00000547194 HLA-CQ95604 372 aa7.84□□□□□ -1.15
HCFC2-203ENST00000547194 ZFP42Q96MM3 310 aa7.84□□□□□ -1.15
HCFC2-203ENST00000547194 DXOO77932 396 aaKnown RBP7.83□□□□□ -1.16
HCFC2-203ENST00000547194 WNT7BP56706 349 aa7.83□□□□□ -1.16
HCFC2-203ENST00000547194 PHOX2BQ99453 314 aa7.82□□□□□ -1.16
HCFC2-203ENST00000547194 GNPATO15228 680 aa7.81□□□□□ -1.16
HCFC2-203ENST00000547194 PURBQ96QR8 312 aaKnown RBP7.79□□□□□ -1.16
HCFC2-203ENST00000547194 TLL2Q9Y6L7 1015 aa7.78□□□□□ -1.16
HCFC2-203ENST00000547194 SIAH2O43255 324 aa7.77□□□□□ -1.17
HCFC2-203ENST00000547194 GUCA2AQ02747 115 aa7.77□□□□□ -1.17
HCFC2-203ENST00000547194 SYMPKQ92797 1274 aaKnown RBP7.77□□□□□ -1.17
HCFC2-203ENST00000547194 KDM4AO75164 1064 aa7.76□□□□□ -1.17
HCFC2-203ENST00000547194 PTCRAQ6ISU1 281 aaPredicted RBP7.76□□□□□ -1.17
HCFC2-203ENST00000547194 TMEM151AQ8N4L1 468 aa7.76□□□□□ -1.17
HCFC2-203ENST00000547194 KCNMA1Q12791 1236 aa7.75□□□□□ -1.17
HCFC2-203ENST00000547194 SCARF1Q14162 830 aa7.75□□□□□ -1.17
HCFC2-203ENST00000547194 LINC01559Q495D7 138 aa7.75□□□□□ -1.17
HCFC2-203ENST00000547194 MRPL14Q6P1L8 145 aaKnown RBP7.75□□□□□ -1.17
HCFC2-203ENST00000547194 GDF11O95390 407 aa7.74□□□□□ -1.17
HCFC2-203ENST00000547194 JUNDP17535 347 aa7.74□□□□□ -1.17
HCFC2-203ENST00000547194 NUDT12Q9BQG2 462 aa7.74□□□□□ -1.17
HCFC2-203ENST00000547194 HAP1P54257 671 aaPredicted RBP7.73□□□□□ -1.17
HCFC2-203ENST00000547194 NNTQ13423 1086 aa7.73□□□□□ -1.17
HCFC2-203ENST00000547194 CD46P15529 392 aa7.72□□□□□ -1.17
HCFC2-203ENST00000547194 GSK3AP49840 483 aa7.72□□□□□ -1.17
HCFC2-203ENST00000547194 SH3BP2P78314 561 aa7.72□□□□□ -1.17
HCFC2-203ENST00000547194 RASSF7Q02833 373 aa7.72□□□□□ -1.17
HCFC2-203ENST00000547194 C6orf118Q5T5N4 469 aa7.72□□□□□ -1.17
HCFC2-203ENST00000547194 GPR37O15354 613 aa7.71□□□□□ -1.18
HCFC2-203ENST00000547194 MAN1A2O60476 641 aa7.71□□□□□ -1.18
HCFC2-203ENST00000547194 WDR4P57081 412 aaKnown RBP7.71□□□□□ -1.18
HCFC2-203ENST00000547194 HOXA2O43364 376 aa7.69□□□□□ -1.18
HCFC2-203ENST00000547194 GPAT2Q6NUI2 795 aa7.69□□□□□ -1.18
HCFC2-203ENST00000547194 P3H3Q8IVL6 736 aa7.69□□□□□ -1.18
HCFC2-203ENST00000547194 VSIG8P0DPA2 414 aa7.68□□□□□ -1.18
HCFC2-203ENST00000547194 BAP1Q92560 729 aa7.68□□□□□ -1.18
HCFC2-203ENST00000547194 TIMP2P16035 220 aa7.67□□□□□ -1.18
HCFC2-203ENST00000547194 CNTNAP3BQ96NU0 1288 aa7.67□□□□□ -1.18
HCFC2-203ENST00000547194 CNTNAP3Q9BZ76 1288 aa7.67□□□□□ -1.18
HCFC2-203ENST00000547194 PPFIA3O75145 1194 aa7.66□□□□□ -1.18
HCFC2-203ENST00000547194 ADH1CP00326 375 aa7.66□□□□□ -1.18
HCFC2-203ENST00000547194 MDM2Q00987 491 aaPredicted RBP7.66□□□□□ -1.18
HCFC2-203ENST00000547194 SMYD5Q6GMV2 418 aa7.66□□□□□ -1.18
HCFC2-203ENST00000547194 UNC93B1Q9H1C4 597 aa7.66□□□□□ -1.18
HCFC2-203ENST00000547194 PLEKHG3A1L390 1219 aa7.65□□□□□ -1.18
HCFC2-203ENST00000547194 TESPA1A2RU30 521 aaPredicted RBP7.65□□□□□ -1.18
HCFC2-203ENST00000547194 C6orf229H3BNL8 230 aa7.65□□□□□ -1.18
HCFC2-203ENST00000547194 CCNYL3P0C7X3 344 aa7.65□□□□□ -1.18
HCFC2-203ENST00000547194 USP46P62068 366 aa7.65□□□□□ -1.18
HCFC2-203ENST00000547194 ARID5BQ14865 1188 aa7.65□□□□□ -1.18
HCFC2-203ENST00000547194 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
HCFC2-203ENST00000547194 RNF225M0QZC1 329 aaPredicted RBP7.64□□□□□ -1.19
HCFC2-203ENST00000547194 MS4A1P11836 297 aa7.64□□□□□ -1.19
HCFC2-203ENST00000547194 GPIHBP1Q8IV16 184 aa7.64□□□□□ -1.19
HCFC2-203ENST00000547194 VSIG10Q8N0Z9 540 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms