RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 NLRP1Q9C000 1473 aa13.66□□□□□ -0.22
NPAS3-205ENST00000547068 ABCC3O15438 1527 aa13.66□□□□□ -0.22
NPAS3-205ENST00000547068 MRE11P49959 708 aa13.65□□□□□ -0.22
NPAS3-205ENST00000547068 SLFN5Q08AF3 891 aa13.65□□□□□ -0.22
NPAS3-205ENST00000547068 TBC1D2Q9BYX2 928 aa13.65□□□□□ -0.22
NPAS3-205ENST00000547068 MYH16Q9H6N6 1097 aa13.64□□□□□ -0.23
NPAS3-205ENST00000547068 DISP3Q9P2K9 1392 aa13.63□□□□□ -0.23
NPAS3-205ENST00000547068 BCAR3O75815 825 aa13.63□□□□□ -0.23
NPAS3-205ENST00000547068 ESPNB1AK53 854 aa13.63□□□□□ -0.23
NPAS3-205ENST00000547068 TRAK2O60296 914 aa13.62□□□□□ -0.23
NPAS3-205ENST00000547068 SPRYD3Q8NCJ5 442 aa13.62□□□□□ -0.23
NPAS3-205ENST00000547068 TBC1D32Q96NH3 1257 aa13.62□□□□□ -0.23
NPAS3-205ENST00000547068 EFCAB6Q5THR3 1501 aa13.62□□□□□ -0.23
NPAS3-205ENST00000547068 CLTCQ00610 1675 aaKnown RBP13.62□□□□□ -0.23
NPAS3-205ENST00000547068 CAMSAP1Q5T5Y3 1602 aa13.62□□□□□ -0.23
NPAS3-205ENST00000547068 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
NPAS3-205ENST00000547068 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
NPAS3-205ENST00000547068 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
NPAS3-205ENST00000547068 CFAP65Q6ZU64 1925 aaKnown RBP13.61□□□□□ -0.23
NPAS3-205ENST00000547068 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
NPAS3-205ENST00000547068 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
NPAS3-205ENST00000547068 CLUAP1Q96AJ1 413 aa13.61□□□□□ -0.23
NPAS3-205ENST00000547068 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
NPAS3-205ENST00000547068 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
NPAS3-205ENST00000547068 ZMYM3Q14202 1370 aa13.61□□□□□ -0.23
NPAS3-205ENST00000547068 TESK2Q96S53 571 aa13.6□□□□□ -0.23
NPAS3-205ENST00000547068 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
NPAS3-205ENST00000547068 NPATQ14207 1427 aa13.6□□□□□ -0.23
NPAS3-205ENST00000547068 PPP2R1AP30153 589 aa13.6□□□□□ -0.23
NPAS3-205ENST00000547068 TMF1P82094 1093 aa13.59□□□□□ -0.23
NPAS3-205ENST00000547068 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
NPAS3-205ENST00000547068 TRIM44Q96DX7 344 aaPredicted RBP13.59□□□□□ -0.23
NPAS3-205ENST00000547068 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
NPAS3-205ENST00000547068 CCDC144AA2RUR9 1427 aa13.59□□□□□ -0.23
NPAS3-205ENST00000547068 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.23
NPAS3-205ENST00000547068 TPM2P07951 284 aa13.58□□□□□ -0.23
NPAS3-205ENST00000547068 PDE3AQ14432 1141 aa13.58□□□□□ -0.23
NPAS3-205ENST00000547068 CHMP5Q9NZZ3 219 aa13.58□□□□□ -0.23
NPAS3-205ENST00000547068 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
NPAS3-205ENST00000547068 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
NPAS3-205ENST00000547068 ISY1Q9ULR0 285 aaKnown RBP13.57□□□□□ -0.24
NPAS3-205ENST00000547068 COG6Q9Y2V7 657 aa13.57□□□□□ -0.24
NPAS3-205ENST00000547068 SPHKAPQ2M3C7 1700 aa13.57□□□□□ -0.24
NPAS3-205ENST00000547068 GPRASP1Q5JY77 1395 aa13.57□□□□□ -0.24
NPAS3-205ENST00000547068 CCDC146Q8IYE0 955 aa13.57□□□□□ -0.24
NPAS3-205ENST00000547068 KNSTRNQ9Y448 316 aa13.57□□□□□ -0.24
NPAS3-205ENST00000547068 PTPRTO14522 1441 aa13.57□□□□□ -0.24
NPAS3-205ENST00000547068 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
NPAS3-205ENST00000547068 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
NPAS3-205ENST00000547068 E9PSI1 815 aa13.56□□□□□ -0.24
NPAS3-205ENST00000547068 MROH2AA6NES4 1674 aa13.56□□□□□ -0.24
NPAS3-205ENST00000547068 DDX11L8A8MPP1 907 aa13.55□□□□□ -0.24
NPAS3-205ENST00000547068 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
NPAS3-205ENST00000547068 PANK1Q8TE04 598 aa13.55□□□□□ -0.24
NPAS3-205ENST00000547068 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
NPAS3-205ENST00000547068 NINLQ9Y2I6 1382 aa13.55□□□□□ -0.24
NPAS3-205ENST00000547068 TRPM2O94759 1503 aa13.54□□□□□ -0.24
NPAS3-205ENST00000547068 APAF1O14727 1248 aa13.54□□□□□ -0.24
NPAS3-205ENST00000547068 PMFBP1Q8TBY8 1022 aa13.54□□□□□ -0.24
NPAS3-205ENST00000547068 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
NPAS3-205ENST00000547068 ADAMTSL3P82987 1691 aa13.54□□□□□ -0.24
NPAS3-205ENST00000547068 MADDQ8WXG6 1647 aa13.54□□□□□ -0.24
NPAS3-205ENST00000547068 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
NPAS3-205ENST00000547068 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
NPAS3-205ENST00000547068 NOS1P29475 1434 aa13.54□□□□□ -0.24
NPAS3-205ENST00000547068 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
NPAS3-205ENST00000547068 ERVK-7P63135 1459 aa13.52□□□□□ -0.24
NPAS3-205ENST00000547068 LAMC1P11047 1609 aa13.52□□□□□ -0.24
NPAS3-205ENST00000547068 RIMS1Q86UR5 1692 aaKnown RBP13.52□□□□□ -0.24
NPAS3-205ENST00000547068 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.25
NPAS3-205ENST00000547068 PDZRN3Q9UPQ7 1066 aa13.52□□□□□ -0.25
NPAS3-205ENST00000547068 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
NPAS3-205ENST00000547068 KIAA1211Q6ZU35 1233 aa13.51□□□□□ -0.25
NPAS3-205ENST00000547068 C3P01024 1663 aa13.51□□□□□ -0.25
NPAS3-205ENST00000547068 IDI1Q13907 227 aa13.5□□□□□ -0.25
NPAS3-205ENST00000547068 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
NPAS3-205ENST00000547068 PODXL2Q9NZ53 605 aa13.5□□□□□ -0.25
NPAS3-205ENST00000547068 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
NPAS3-205ENST00000547068 SPATA31D1Q6ZQQ2 1576 aa13.5□□□□□ -0.25
NPAS3-205ENST00000547068 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
NPAS3-205ENST00000547068 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
NPAS3-205ENST00000547068 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
NPAS3-205ENST00000547068 CLTCL1P53675 1640 aa13.49□□□□□ -0.25
NPAS3-205ENST00000547068 TNRQ92752 1358 aa13.49□□□□□ -0.25
NPAS3-205ENST00000547068 AAMPQ13685 434 aa13.49□□□□□ -0.25
NPAS3-205ENST00000547068 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
NPAS3-205ENST00000547068 KIF1BO60333 1816 aa13.49□□□□□ -0.25
NPAS3-205ENST00000547068 MFAP1P55081 439 aaKnown RBP13.48□□□□□ -0.25
NPAS3-205ENST00000547068 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
NPAS3-205ENST00000547068 GAS2L3Q86XJ1 694 aa13.48□□□□□ -0.25
NPAS3-205ENST00000547068 SYNMO15061 1565 aa13.48□□□□□ -0.25
NPAS3-205ENST00000547068 UGGT1Q9NYU2 1555 aa13.48□□□□□ -0.25
NPAS3-205ENST00000547068 RWDD1Q9H446 243 aaPredicted RBP13.47□□□□□ -0.25
NPAS3-205ENST00000547068 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
NPAS3-205ENST00000547068 NGEFQ8N5V2 710 aa13.46□□□□□ -0.26
NPAS3-205ENST00000547068 PTPRMP28827 1452 aa13.46□□□□□ -0.26
NPAS3-205ENST00000547068 PIK3C2BO00750 1634 aa13.45□□□□□ -0.26
NPAS3-205ENST00000547068 CCDC173Q0VFZ6 552 aa13.45□□□□□ -0.26
NPAS3-205ENST00000547068 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
NPAS3-205ENST00000547068 KDM4FA0A1W2PPD8 638 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms