RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
DDX54-203ENST00000546869 POGKQ9P215 609 aa20.67■□□□□ 0.9
DDX54-203ENST00000546869 TRPM1Q7Z4N2 1603 aa20.67■□□□□ 0.9
DDX54-203ENST00000546869 PIP4K2BP78356 416 aa20.66■□□□□ 0.9
DDX54-203ENST00000546869 ROCK2O75116 1388 aaKnown RBP20.66■□□□□ 0.9
DDX54-203ENST00000546869 NALCNQ8IZF0 1738 aa20.64■□□□□ 0.9
DDX54-203ENST00000546869 MST1RQ04912 1400 aa20.63■□□□□ 0.89
DDX54-203ENST00000546869 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
DDX54-203ENST00000546869 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
DDX54-203ENST00000546869 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
DDX54-203ENST00000546869 C1orf167Q5SNV9 1468 aa20.59■□□□□ 0.89
DDX54-203ENST00000546869 CARD11Q9BXL7 1154 aa20.59■□□□□ 0.89
DDX54-203ENST00000546869 ARHGEF28Q8N1W1 1705 aaKnown RBP20.58■□□□□ 0.89
DDX54-203ENST00000546869 SAFB2Q14151 953 aaKnown RBP eCLIP20.58■□□□□ 0.89
DDX54-203ENST00000546869 ADGRB2O60241 1585 aa20.58■□□□□ 0.88
DDX54-203ENST00000546869 CENPJQ9HC77 1338 aaPredicted RBP20.57■□□□□ 0.88
DDX54-203ENST00000546869 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
DDX54-203ENST00000546869 EIF3AQ14152 1382 aaKnown RBP20.57■□□□□ 0.88
DDX54-203ENST00000546869 WASLO00401 505 aaPredicted RBP20.55■□□□□ 0.88
DDX54-203ENST00000546869 HSPA1LP34931 641 aa20.55■□□□□ 0.88
DDX54-203ENST00000546869 ROBO1Q9Y6N7 1651 aa20.54■□□□□ 0.88
DDX54-203ENST00000546869 MINK1Q8N4C8 1332 aaPredicted RBP20.54■□□□□ 0.88
DDX54-203ENST00000546869 HIRIP3Q9BW71 556 aaPredicted RBP20.52■□□□□ 0.88
DDX54-203ENST00000546869 ANKARQ7Z5J8 1434 aa20.52■□□□□ 0.87
DDX54-203ENST00000546869 FMN2Q9NZ56 1722 aa20.51■□□□□ 0.87
DDX54-203ENST00000546869 ORAI2Q96SN7 254 aa20.51■□□□□ 0.87
DDX54-203ENST00000546869 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
DDX54-203ENST00000546869 SLC24A1O60721 1099 aa20.49■□□□□ 0.87
DDX54-203ENST00000546869 ESCO1Q5FWF5 840 aa20.49■□□□□ 0.87
DDX54-203ENST00000546869 CDK19Q9BWU1 502 aa20.49■□□□□ 0.87
DDX54-203ENST00000546869 AHDC1Q5TGY3 1603 aaPredicted RBP20.49■□□□□ 0.87
DDX54-203ENST00000546869 TULP4Q9NRJ4 1543 aa20.47■□□□□ 0.87
DDX54-203ENST00000546869 NUTM2FA1L443 756 aa20.46■□□□□ 0.87
DDX54-203ENST00000546869 EVC2Q86UK5 1308 aa20.45■□□□□ 0.86
DDX54-203ENST00000546869 PRR36Q9H6K5 1346 aa20.45■□□□□ 0.86
DDX54-203ENST00000546869 NUDT16Q96DE0 195 aaKnown RBP20.44■□□□□ 0.86
DDX54-203ENST00000546869 PHF8Q9UPP1 1060 aa20.44■□□□□ 0.86
DDX54-203ENST00000546869 SOS2Q07890 1332 aaPredicted RBP20.44■□□□□ 0.86
DDX54-203ENST00000546869 NPHP3Q7Z494 1330 aa20.44■□□□□ 0.86
DDX54-203ENST00000546869 QRICH2Q9H0J4 1663 aa20.43■□□□□ 0.86
DDX54-203ENST00000546869 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
DDX54-203ENST00000546869 CCDC61Q9Y6R9 512 aa20.43■□□□□ 0.86
DDX54-203ENST00000546869 NHSL1Q5SYE7 1610 aa20.42■□□□□ 0.86
DDX54-203ENST00000546869 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
DDX54-203ENST00000546869 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
DDX54-203ENST00000546869 USP32Q8NFA0 1604 aa20.42■□□□□ 0.86
DDX54-203ENST00000546869 TESK2Q96S53 571 aa20.41■□□□□ 0.86
DDX54-203ENST00000546869 USP47Q96K76 1375 aa20.41■□□□□ 0.86
DDX54-203ENST00000546869 ATP7BP35670 1465 aa20.41■□□□□ 0.86
DDX54-203ENST00000546869 PLEKHG3A1L390 1219 aa20.4■□□□□ 0.86
DDX54-203ENST00000546869 FOXO3O43524 673 aa20.4■□□□□ 0.86
DDX54-203ENST00000546869 PHLPP1O60346 1717 aa20.4■□□□□ 0.86
DDX54-203ENST00000546869 SRPK2P78362 688 aaKnown RBP20.4■□□□□ 0.86
DDX54-203ENST00000546869 COL16A1Q07092 1604 aaPredicted RBP20.4■□□□□ 0.86
DDX54-203ENST00000546869 KIF1AQ12756 1690 aa20.39■□□□□ 0.86
DDX54-203ENST00000546869 JCADQ9P266 1359 aa20.38■□□□□ 0.85
DDX54-203ENST00000546869 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
DDX54-203ENST00000546869 CABP2Q9NPB3 220 aa20.38■□□□□ 0.85
DDX54-203ENST00000546869 PSME1Q06323 249 aa20.36■□□□□ 0.85
DDX54-203ENST00000546869 PMFBP1Q8TBY8 1022 aa20.36■□□□□ 0.85
DDX54-203ENST00000546869 PXDNQ92626 1479 aa20.36■□□□□ 0.85
DDX54-203ENST00000546869 KRT28Q7Z3Y7 464 aa20.35■□□□□ 0.85
DDX54-203ENST00000546869 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
DDX54-203ENST00000546869 ATAD2Q6PL18 1390 aa20.34■□□□□ 0.85
DDX54-203ENST00000546869 RGPD8O14715 1765 aaPredicted RBP20.34■□□□□ 0.85
DDX54-203ENST00000546869 EIF4G2P78344 907 aaKnown RBP eCLIP20.34■□□□□ 0.85
DDX54-203ENST00000546869 NGDNQ8NEJ9 315 aaKnown RBP20.33■□□□□ 0.85
DDX54-203ENST00000546869 SBNO1A3KN83 1393 aa20.33■□□□□ 0.84
DDX54-203ENST00000546869 SPATA31A6Q5VVP1 1343 aa20.32■□□□□ 0.84
DDX54-203ENST00000546869 ITSN1Q15811 1721 aa20.32■□□□□ 0.84
DDX54-203ENST00000546869 TOPAZ1Q8N9V7 1692 aa20.32■□□□□ 0.84
DDX54-203ENST00000546869 PPIP5K1Q6PFW1 1433 aa20.31■□□□□ 0.84
DDX54-203ENST00000546869 TMF1P82094 1093 aa20.31■□□□□ 0.84
DDX54-203ENST00000546869 CABP1Q9NZU7 370 aa20.31■□□□□ 0.84
DDX54-203ENST00000546869 ACEP12821 1306 aa20.3■□□□□ 0.84
DDX54-203ENST00000546869 SPATA31A3Q5VYP0 1347 aa20.3■□□□□ 0.84
DDX54-203ENST00000546869 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
DDX54-203ENST00000546869 BRD4O60885 1362 aaPredicted RBP20.29■□□□□ 0.84
DDX54-203ENST00000546869 PNPLA6Q8IY17 1366 aa20.29■□□□□ 0.84
DDX54-203ENST00000546869 XPCQ01831 940 aaPredicted RBP20.28■□□□□ 0.84
DDX54-203ENST00000546869 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
DDX54-203ENST00000546869 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
DDX54-203ENST00000546869 HSPA5P11021 654 aaKnown RBP20.27■□□□□ 0.84
DDX54-203ENST00000546869 NINLQ9Y2I6 1382 aa20.25■□□□□ 0.83
DDX54-203ENST00000546869 TNS3Q68CZ2 1445 aa20.25■□□□□ 0.83
DDX54-203ENST00000546869 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
DDX54-203ENST00000546869 DISP3Q9P2K9 1392 aa20.24■□□□□ 0.83
DDX54-203ENST00000546869 CPSF1Q10570 1443 aaKnown RBP20.24■□□□□ 0.83
DDX54-203ENST00000546869 COL22A1Q8NFW1 1626 aaPredicted RBP20.22■□□□□ 0.83
DDX54-203ENST00000546869 TRPM3Q9HCF6 1732 aaPredicted RBP20.21■□□□□ 0.83
DDX54-203ENST00000546869 USP6P35125 1406 aa20.2■□□□□ 0.82
DDX54-203ENST00000546869 SSH2Q76I76 1423 aa20.2■□□□□ 0.82
DDX54-203ENST00000546869 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
DDX54-203ENST00000546869 TMC1Q8TDI8 760 aa20.19■□□□□ 0.82
DDX54-203ENST00000546869 TERF2IPQ9NYB0 399 aa20.19■□□□□ 0.82
DDX54-203ENST00000546869 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
DDX54-203ENST00000546869 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
DDX54-203ENST00000546869 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
DDX54-203ENST00000546869 ZEB1P37275 1124 aaPredicted RBP20.17■□□□□ 0.82
DDX54-203ENST00000546869 HDGFL2Q7Z4V5 671 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms