RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 TMEM132EQ6IEE7 984 aa27.82■■■□□ 2.04
CHERP-204ENST00000546538 KNDC1Q76NI1 1749 aa27.81■■■□□ 2.04
CHERP-204ENST00000546538 WAPLQ7Z5K2 1190 aa27.81■■■□□ 2.04
CHERP-204ENST00000546538 AFF2P51816 1311 aa27.8■■■□□ 2.04
CHERP-204ENST00000546538 STK26Q9P289 416 aa27.8■■■□□ 2.04
CHERP-204ENST00000546538 RAB3GAP2Q9H2M9 1393 aa27.79■■■□□ 2.04
CHERP-204ENST00000546538 ABCC11Q96J66 1382 aa27.79■■■□□ 2.04
CHERP-204ENST00000546538 NRXN1Q9ULB1 1477 aa27.78■■■□□ 2.04
CHERP-204ENST00000546538 YTHDC2Q9H6S0 1430 aaKnown RBP27.75■■■□□ 2.03
CHERP-204ENST00000546538 PXDNQ92626 1479 aa27.74■■■□□ 2.03
CHERP-204ENST00000546538 C8orf37Q96NL8 207 aa27.73■■■□□ 2.03
CHERP-204ENST00000546538 MYOM2P54296 1465 aa27.72■■■□□ 2.03
CHERP-204ENST00000546538 COL22A1Q8NFW1 1626 aaPredicted RBP27.72■■■□□ 2.03
CHERP-204ENST00000546538 RXRBP28702 533 aa27.71■■■□□ 2.03
CHERP-204ENST00000546538 ESCO1Q5FWF5 840 aa27.71■■■□□ 2.03
CHERP-204ENST00000546538 C14orf93Q9H972 538 aaKnown RBP27.71■■■□□ 2.03
CHERP-204ENST00000546538 FMN2Q9NZ56 1722 aa27.7■■■□□ 2.03
CHERP-204ENST00000546538 ADAMTS2O95450 1211 aa27.7■■■□□ 2.03
CHERP-204ENST00000546538 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.02
CHERP-204ENST00000546538 NUTM2FA1L443 756 aa27.69■■■□□ 2.02
CHERP-204ENST00000546538 CFAP70Q5T0N1 1121 aa27.68■■■□□ 2.02
CHERP-204ENST00000546538 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
CHERP-204ENST00000546538 XPCQ01831 940 aaPredicted RBP27.67■■■□□ 2.02
CHERP-204ENST00000546538 FOXO3O43524 673 aa27.66■■■□□ 2.02
CHERP-204ENST00000546538 UPF1Q92900 1129 aaKnown RBP eCLIP27.66■■■□□ 2.02
CHERP-204ENST00000546538 RGS12O14924 1447 aa27.65■■■□□ 2.02
CHERP-204ENST00000546538 NPHP3Q7Z494 1330 aa27.65■■■□□ 2.02
CHERP-204ENST00000546538 QTRT2Q9H974 415 aaKnown RBP27.64■■■□□ 2.02
CHERP-204ENST00000546538 SIRT1Q96EB6 747 aa27.63■■■□□ 2.01
CHERP-204ENST00000546538 NGLY1Q96IV0 654 aa27.62■■■□□ 2.01
CHERP-204ENST00000546538 ADGRB1O14514 1584 aa27.61■■■□□ 2.01
CHERP-204ENST00000546538 RGPD8O14715 1765 aaPredicted RBP27.6■■■□□ 2.01
CHERP-204ENST00000546538 RBM6P78332 1123 aaKnown RBP27.58■■■□□ 2.01
CHERP-204ENST00000546538 FNBP4Q8N3X1 1017 aaPredicted RBP27.58■■■□□ 2.01
CHERP-204ENST00000546538 DHX57Q6P158 1386 aaKnown RBP27.57■■■□□ 2
CHERP-204ENST00000546538 KIF1AQ12756 1690 aa27.57■■■□□ 2
CHERP-204ENST00000546538 DLC1Q96QB1 1528 aa27.56■■■□□ 2
CHERP-204ENST00000546538 PRAM1Q96QH2 718 aa27.56■■■□□ 2
CHERP-204ENST00000546538 MARF1Q9Y4F3 1742 aaKnown RBP27.56■■■□□ 2
CHERP-204ENST00000546538 USP21Q9UK80 565 aa27.55■■■□□ 2
CHERP-204ENST00000546538 USP32Q8NFA0 1604 aa27.54■■■□□ 2
CHERP-204ENST00000546538 BCL9LQ86UU0 1499 aa27.53■■■□□ 2
CHERP-204ENST00000546538 ATRNO75882 1429 aa27.53■■■□□ 2
CHERP-204ENST00000546538 SAFB2Q14151 953 aaKnown RBP eCLIP27.53■■■□□ 2
CHERP-204ENST00000546538 SPATA31A3Q5VYP0 1347 aa27.53■■■□□ 2
CHERP-204ENST00000546538 EP400Q96L91 3159 aa27.5■■□□□ 1.99
CHERP-204ENST00000546538 ADGRB2O60241 1585 aa27.5■■□□□ 1.99
CHERP-204ENST00000546538 HRCP23327 699 aa27.48■■□□□ 1.99
CHERP-204ENST00000546538 KRT28Q7Z3Y7 464 aa27.48■■□□□ 1.99
CHERP-204ENST00000546538 PHF8Q9UPP1 1060 aa27.48■■□□□ 1.99
CHERP-204ENST00000546538 DCAF11Q8TEB1 546 aa27.47■■□□□ 1.99
CHERP-204ENST00000546538 TRPC5Q9UL62 973 aaPredicted RBP27.47■■□□□ 1.99
CHERP-204ENST00000546538 KDM2AQ9Y2K7 1162 aa27.47■■□□□ 1.99
CHERP-204ENST00000546538 TNS3Q68CZ2 1445 aa27.44■■□□□ 1.98
CHERP-204ENST00000546538 TRAK1Q9UPV9 953 aa27.44■■□□□ 1.98
CHERP-204ENST00000546538 SLIT2O94813 1529 aa27.42■■□□□ 1.98
CHERP-204ENST00000546538 POGKQ9P215 609 aa27.42■■□□□ 1.98
CHERP-204ENST00000546538 ANKARQ7Z5J8 1434 aa27.42■■□□□ 1.98
CHERP-204ENST00000546538 HIRIP3Q9BW71 556 aaPredicted RBP27.41■■□□□ 1.98
CHERP-204ENST00000546538 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
CHERP-204ENST00000546538 ABCA3Q99758 1704 aa27.41■■□□□ 1.98
CHERP-204ENST00000546538 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.41■■□□□ 1.98
CHERP-204ENST00000546538 CABLES1Q8TDN4 633 aa27.4■■□□□ 1.98
CHERP-204ENST00000546538 PMFBP1Q8TBY8 1022 aa27.39■■□□□ 1.97
CHERP-204ENST00000546538 SBNO1A3KN83 1393 aa27.39■■□□□ 1.97
CHERP-204ENST00000546538 MINK1Q8N4C8 1332 aaPredicted RBP27.38■■□□□ 1.97
CHERP-204ENST00000546538 TRPM3Q9HCF6 1732 aaPredicted RBP27.38■■□□□ 1.97
CHERP-204ENST00000546538 GLI3P10071 1580 aa27.38■■□□□ 1.97
CHERP-204ENST00000546538 ARHGEF28Q8N1W1 1705 aaKnown RBP27.37■■□□□ 1.97
CHERP-204ENST00000546538 TULP4Q9NRJ4 1543 aa27.35■■□□□ 1.97
CHERP-204ENST00000546538 SRCAPQ6ZRS2 3230 aa27.35■■□□□ 1.97
CHERP-204ENST00000546538 GJD4Q96KN9 370 aaPredicted RBP27.34■■□□□ 1.97
CHERP-204ENST00000546538 PSME1Q06323 249 aa27.33■■□□□ 1.97
CHERP-204ENST00000546538 UNC5CLQ8IV45 518 aa27.33■■□□□ 1.97
CHERP-204ENST00000546538 RALGAPBQ86X10 1494 aa27.33■■□□□ 1.97
CHERP-204ENST00000546538 ATAD2Q6PL18 1390 aa27.33■■□□□ 1.97
CHERP-204ENST00000546538 STAC3Q96MF2 364 aa27.33■■□□□ 1.96
CHERP-204ENST00000546538 PLCH1Q4KWH8 1693 aa27.32■■□□□ 1.96
CHERP-204ENST00000546538 ALS2Q96Q42 1657 aa27.32■■□□□ 1.96
CHERP-204ENST00000546538 WASLO00401 505 aaPredicted RBP27.32■■□□□ 1.96
CHERP-204ENST00000546538 PLEKHG5O94827 1062 aa27.32■■□□□ 1.96
CHERP-204ENST00000546538 ARHGEF10O15013 1369 aa27.29■■□□□ 1.96
CHERP-204ENST00000546538 LMOD2Q6P5Q4 547 aa27.27■■□□□ 1.96
CHERP-204ENST00000546538 ATP7BP35670 1465 aa27.27■■□□□ 1.96
CHERP-204ENST00000546538 NWD2Q9ULI1 1742 aa27.27■■□□□ 1.96
CHERP-204ENST00000546538 CRYBG1Q9Y4K1 1723 aa27.25■■□□□ 1.95
CHERP-204ENST00000546538 EIF3AQ14152 1382 aaKnown RBP27.25■■□□□ 1.95
CHERP-204ENST00000546538 BRWD3Q6RI45 1802 aa27.24■■□□□ 1.95
CHERP-204ENST00000546538 KIAA1210Q9ULL0 1709 aa27.24■■□□□ 1.95
CHERP-204ENST00000546538 FAM83GA6ND36 823 aa27.24■■□□□ 1.95
CHERP-204ENST00000546538 NRAPQ86VF7 1730 aa27.23■■□□□ 1.95
CHERP-204ENST00000546538 HAP1P54257 671 aaPredicted RBP27.22■■□□□ 1.95
CHERP-204ENST00000546538 NBPF1Q3BBV0 1214 aa27.22■■□□□ 1.95
CHERP-204ENST00000546538 VPS72Q15906 364 aa27.21■■□□□ 1.95
CHERP-204ENST00000546538 GPRASP1Q5JY77 1395 aa27.2■■□□□ 1.95
CHERP-204ENST00000546538 NUDT16Q96DE0 195 aaKnown RBP27.19■■□□□ 1.94
CHERP-204ENST00000546538 TOPAZ1Q8N9V7 1692 aa27.19■■□□□ 1.94
CHERP-204ENST00000546538 ITSN1Q15811 1721 aa27.19■■□□□ 1.94
CHERP-204ENST00000546538 NGDNQ8NEJ9 315 aaKnown RBP27.16■■□□□ 1.94
CHERP-204ENST00000546538 ONECUT3O60422 494 aaPredicted RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms