RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
TMEM116-203ENST00000546537 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
TMEM116-203ENST00000546537 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
TMEM116-203ENST00000546537 PXDNQ92626 1479 aa16.79■□□□□ 0.28
TMEM116-203ENST00000546537 SF3B2Q13435 895 aaKnown RBP16.78■□□□□ 0.28
TMEM116-203ENST00000546537 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.28
TMEM116-203ENST00000546537 SLIT2O94813 1529 aa16.77■□□□□ 0.28
TMEM116-203ENST00000546537 UNC5CLQ8IV45 518 aa16.77■□□□□ 0.28
TMEM116-203ENST00000546537 PRAG1Q86YV5 1406 aa16.77■□□□□ 0.27
TMEM116-203ENST00000546537 NUP155O75694 1391 aa16.77■□□□□ 0.27
TMEM116-203ENST00000546537 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.27
TMEM116-203ENST00000546537 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
TMEM116-203ENST00000546537 HRCP23327 699 aa16.75■□□□□ 0.27
TMEM116-203ENST00000546537 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
TMEM116-203ENST00000546537 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
TMEM116-203ENST00000546537 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
TMEM116-203ENST00000546537 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
TMEM116-203ENST00000546537 CLTCL1P53675 1640 aa16.72■□□□□ 0.27
TMEM116-203ENST00000546537 ESCO1Q5FWF5 840 aa16.72■□□□□ 0.27
TMEM116-203ENST00000546537 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
TMEM116-203ENST00000546537 KIF1BO60333 1816 aa16.72■□□□□ 0.27
TMEM116-203ENST00000546537 USP32Q8NFA0 1604 aa16.71■□□□□ 0.27
TMEM116-203ENST00000546537 FOXO3O43524 673 aa16.7■□□□□ 0.26
TMEM116-203ENST00000546537 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
TMEM116-203ENST00000546537 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
TMEM116-203ENST00000546537 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
TMEM116-203ENST00000546537 NWD2Q9ULI1 1742 aa16.69■□□□□ 0.26
TMEM116-203ENST00000546537 BAG6P46379 1132 aa16.68■□□□□ 0.26
TMEM116-203ENST00000546537 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
TMEM116-203ENST00000546537 PLCH1Q4KWH8 1693 aa16.68■□□□□ 0.26
TMEM116-203ENST00000546537 VPS72Q15906 364 aa16.67■□□□□ 0.26
TMEM116-203ENST00000546537 SPATA31A3Q5VYP0 1347 aa16.66■□□□□ 0.26
TMEM116-203ENST00000546537 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
TMEM116-203ENST00000546537 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
TMEM116-203ENST00000546537 KIF1AQ12756 1690 aa16.63■□□□□ 0.25
TMEM116-203ENST00000546537 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
TMEM116-203ENST00000546537 NAIPQ13075 1403 aa16.62■□□□□ 0.25
TMEM116-203ENST00000546537 PPLO60437 1756 aa16.61■□□□□ 0.25
TMEM116-203ENST00000546537 CCDC144AA2RUR9 1427 aa16.61■□□□□ 0.25
TMEM116-203ENST00000546537 FMN2Q9NZ56 1722 aa16.6■□□□□ 0.25
TMEM116-203ENST00000546537 YY1P25490 414 aa16.6■□□□□ 0.25
TMEM116-203ENST00000546537 EN1Q05925 392 aaPredicted RBP16.6■□□□□ 0.25
TMEM116-203ENST00000546537 R3HDM1Q15032 1099 aaKnown RBP16.6■□□□□ 0.25
TMEM116-203ENST00000546537 CCDC9Q9Y3X0 531 aaKnown RBP16.6■□□□□ 0.25
TMEM116-203ENST00000546537 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
TMEM116-203ENST00000546537 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
TMEM116-203ENST00000546537 KRT28Q7Z3Y7 464 aa16.58■□□□□ 0.24
TMEM116-203ENST00000546537 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
TMEM116-203ENST00000546537 DISP2A7MBM2 1401 aa16.58■□□□□ 0.24
TMEM116-203ENST00000546537 NRAPQ86VF7 1730 aa16.58■□□□□ 0.24
TMEM116-203ENST00000546537 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
TMEM116-203ENST00000546537 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
TMEM116-203ENST00000546537 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
TMEM116-203ENST00000546537 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
TMEM116-203ENST00000546537 TECPR2O15040 1411 aa16.55■□□□□ 0.24
TMEM116-203ENST00000546537 A0A0G2JS52 829 aa16.55■□□□□ 0.24
TMEM116-203ENST00000546537 MYT1Q01538 1121 aa16.55■□□□□ 0.24
TMEM116-203ENST00000546537 KNDC1Q76NI1 1749 aa16.54■□□□□ 0.24
TMEM116-203ENST00000546537 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
TMEM116-203ENST00000546537 WAPLQ7Z5K2 1190 aa16.54■□□□□ 0.24
TMEM116-203ENST00000546537 FAM83GA6ND36 823 aa16.52■□□□□ 0.24
TMEM116-203ENST00000546537 EZH2Q15910 746 aaKnown RBP16.52■□□□□ 0.24
TMEM116-203ENST00000546537 IFT172Q9UG01 1749 aa16.52■□□□□ 0.24
TMEM116-203ENST00000546537 THSD7AQ9UPZ6 1657 aa16.51■□□□□ 0.23
TMEM116-203ENST00000546537 ITGAEP38570 1179 aa16.51■□□□□ 0.23
TMEM116-203ENST00000546537 PSME1Q06323 249 aa16.51■□□□□ 0.23
TMEM116-203ENST00000546537 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
TMEM116-203ENST00000546537 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
TMEM116-203ENST00000546537 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
TMEM116-203ENST00000546537 ADGRB2O60241 1585 aa16.5■□□□□ 0.23
TMEM116-203ENST00000546537 ARHGEF10O15013 1369 aa16.5■□□□□ 0.23
TMEM116-203ENST00000546537 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
TMEM116-203ENST00000546537 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
TMEM116-203ENST00000546537 CAMKK2Q96RR4 588 aa16.49■□□□□ 0.23
TMEM116-203ENST00000546537 STK26Q9P289 416 aa16.49■□□□□ 0.23
TMEM116-203ENST00000546537 ABCC11Q96J66 1382 aa16.49■□□□□ 0.23
TMEM116-203ENST00000546537 BTG4Q9NY30 223 aa16.48■□□□□ 0.23
TMEM116-203ENST00000546537 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
TMEM116-203ENST00000546537 RREB1Q92766 1687 aa16.48■□□□□ 0.23
TMEM116-203ENST00000546537 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
TMEM116-203ENST00000546537 NUP188Q5SRE5 1749 aa16.46■□□□□ 0.23
TMEM116-203ENST00000546537 LMOD2Q6P5Q4 547 aa16.46■□□□□ 0.23
TMEM116-203ENST00000546537 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.23
TMEM116-203ENST00000546537 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
TMEM116-203ENST00000546537 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
TMEM116-203ENST00000546537 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
TMEM116-203ENST00000546537 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
TMEM116-203ENST00000546537 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
TMEM116-203ENST00000546537 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
TMEM116-203ENST00000546537 ALS2Q96Q42 1657 aa16.43■□□□□ 0.22
TMEM116-203ENST00000546537 TRIM37O94972 964 aa16.42■□□□□ 0.22
TMEM116-203ENST00000546537 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
TMEM116-203ENST00000546537 APBA3O96018 575 aa16.41■□□□□ 0.22
TMEM116-203ENST00000546537 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
TMEM116-203ENST00000546537 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
TMEM116-203ENST00000546537 YTHDC2Q9H6S0 1430 aaKnown RBP16.41■□□□□ 0.22
TMEM116-203ENST00000546537 CRYBG1Q9Y4K1 1723 aa16.41■□□□□ 0.22
TMEM116-203ENST00000546537 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
TMEM116-203ENST00000546537 NINLQ9Y2I6 1382 aa16.4■□□□□ 0.22
TMEM116-203ENST00000546537 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms