RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 DLC1Q96QB1 1528 aa24.77■■□□□ 1.56
CD9-211ENST00000546073 ADGRB1O14514 1584 aa24.76■■□□□ 1.55
CD9-211ENST00000546073 NBPF8Q3BBV2 869 aa24.75■■□□□ 1.55
CD9-211ENST00000546073 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
CD9-211ENST00000546073 MINK1Q8N4C8 1332 aaPredicted RBP24.74■■□□□ 1.55
CD9-211ENST00000546073 PLEKHH1Q9ULM0 1364 aa24.74■■□□□ 1.55
CD9-211ENST00000546073 CENPJQ9HC77 1338 aaPredicted RBP24.73■■□□□ 1.55
CD9-211ENST00000546073 XIRP1Q702N8 1843 aaKnown RBP24.72■■□□□ 1.55
CD9-211ENST00000546073 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.72■■□□□ 1.55
CD9-211ENST00000546073 ESCO1Q5FWF5 840 aa24.71■■□□□ 1.55
CD9-211ENST00000546073 NUTM2FA1L443 756 aa24.7■■□□□ 1.54
CD9-211ENST00000546073 SLC24A1O60721 1099 aa24.7■■□□□ 1.54
CD9-211ENST00000546073 HSPA1LP34931 641 aa24.7■■□□□ 1.54
CD9-211ENST00000546073 HIRIP3Q9BW71 556 aaPredicted RBP24.7■■□□□ 1.54
CD9-211ENST00000546073 WASLO00401 505 aaPredicted RBP24.67■■□□□ 1.54
CD9-211ENST00000546073 MST1RQ04912 1400 aa24.67■■□□□ 1.54
CD9-211ENST00000546073 BRINP3Q76B58 766 aa24.66■■□□□ 1.54
CD9-211ENST00000546073 TRPM1Q7Z4N2 1603 aa24.64■■□□□ 1.54
CD9-211ENST00000546073 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.54
CD9-211ENST00000546073 RALGAPBQ86X10 1494 aa24.64■■□□□ 1.54
CD9-211ENST00000546073 NALCNQ8IZF0 1738 aa24.64■■□□□ 1.54
CD9-211ENST00000546073 CDC42BPGQ6DT37 1551 aa24.64■■□□□ 1.54
CD9-211ENST00000546073 SRPK2P78362 688 aaKnown RBP24.64■■□□□ 1.54
CD9-211ENST00000546073 GPRASP1Q5JY77 1395 aa24.64■■□□□ 1.53
CD9-211ENST00000546073 EVC2Q86UK5 1308 aa24.62■■□□□ 1.53
CD9-211ENST00000546073 ORAI2Q96SN7 254 aa24.62■■□□□ 1.53
CD9-211ENST00000546073 CDK19Q9BWU1 502 aa24.61■■□□□ 1.53
CD9-211ENST00000546073 NPHP3Q7Z494 1330 aa24.6■■□□□ 1.53
CD9-211ENST00000546073 ROBO1Q9Y6N7 1651 aa24.59■■□□□ 1.53
CD9-211ENST00000546073 PSME1Q06323 249 aa24.58■■□□□ 1.53
CD9-211ENST00000546073 LRRC59Q96AG4 307 aaKnown RBP24.58■■□□□ 1.53
CD9-211ENST00000546073 PHF8Q9UPP1 1060 aa24.58■■□□□ 1.53
CD9-211ENST00000546073 ANKARQ7Z5J8 1434 aa24.57■■□□□ 1.52
CD9-211ENST00000546073 FOXO3O43524 673 aa24.55■■□□□ 1.52
CD9-211ENST00000546073 NGDNQ8NEJ9 315 aaKnown RBP24.55■■□□□ 1.52
CD9-211ENST00000546073 NUDT16Q96DE0 195 aaKnown RBP24.55■■□□□ 1.52
CD9-211ENST00000546073 ARHGEF28Q8N1W1 1705 aaKnown RBP24.55■■□□□ 1.52
CD9-211ENST00000546073 CCDC61Q9Y6R9 512 aa24.54■■□□□ 1.52
CD9-211ENST00000546073 ADGRB2O60241 1585 aa24.53■■□□□ 1.52
CD9-211ENST00000546073 PMFBP1Q8TBY8 1022 aa24.51■■□□□ 1.51
CD9-211ENST00000546073 JCADQ9P266 1359 aa24.51■■□□□ 1.51
CD9-211ENST00000546073 ST20-MTHFSA0A0A6YYL1 179 aa24.5■■□□□ 1.51
CD9-211ENST00000546073 CABP2Q9NPB3 220 aa24.5■■□□□ 1.51
CD9-211ENST00000546073 CDCA8Q53HL2 280 aa24.49■■□□□ 1.51
CD9-211ENST00000546073 KRT28Q7Z3Y7 464 aa24.49■■□□□ 1.51
CD9-211ENST00000546073 USP47Q96K76 1375 aa24.49■■□□□ 1.51
CD9-211ENST00000546073 TULP4Q9NRJ4 1543 aa24.49■■□□□ 1.51
CD9-211ENST00000546073 FMN2Q9NZ56 1722 aa24.49■■□□□ 1.51
CD9-211ENST00000546073 EIF4G2P78344 907 aaKnown RBP eCLIP24.48■■□□□ 1.51
CD9-211ENST00000546073 TMF1P82094 1093 aa24.48■■□□□ 1.51
CD9-211ENST00000546073 PHLPP1O60346 1717 aa24.47■■□□□ 1.51
CD9-211ENST00000546073 DDX17Q92841 729 aaKnown RBP24.47■■□□□ 1.51
CD9-211ENST00000546073 AHDC1Q5TGY3 1603 aaPredicted RBP24.46■■□□□ 1.51
CD9-211ENST00000546073 SBNO2Q9Y2G9 1366 aa24.46■■□□□ 1.51
CD9-211ENST00000546073 SOS2Q07890 1332 aaPredicted RBP24.45■■□□□ 1.5
CD9-211ENST00000546073 LMOD2Q6P5Q4 547 aa24.45■■□□□ 1.5
CD9-211ENST00000546073 ATAD2Q6PL18 1390 aa24.44■■□□□ 1.5
CD9-211ENST00000546073 QRICH2Q9H0J4 1663 aa24.44■■□□□ 1.5
CD9-211ENST00000546073 XPCQ01831 940 aaPredicted RBP24.44■■□□□ 1.5
CD9-211ENST00000546073 SPATA31A6Q5VVP1 1343 aa24.43■■□□□ 1.5
CD9-211ENST00000546073 MEX3CQ5U5Q3 659 aaKnown RBP24.43■■□□□ 1.5
CD9-211ENST00000546073 KIF1AQ12756 1690 aa24.43■■□□□ 1.5
CD9-211ENST00000546073 PRR36Q9H6K5 1346 aa24.42■■□□□ 1.5
CD9-211ENST00000546073 PAK3O75914 559 aaPredicted RBP24.42■■□□□ 1.5
CD9-211ENST00000546073 HAP1P54257 671 aaPredicted RBP24.42■■□□□ 1.5
CD9-211ENST00000546073 PHF23Q9BUL5 403 aaPredicted RBP24.42■■□□□ 1.5
CD9-211ENST00000546073 TMC1Q8TDI8 760 aa24.41■■□□□ 1.5
CD9-211ENST00000546073 PUS7Q96PZ0 661 aaKnown RBP24.41■■□□□ 1.5
CD9-211ENST00000546073 PLEKHG3A1L390 1219 aa24.4■■□□□ 1.5
CD9-211ENST00000546073 CABP1Q9NZU7 370 aa24.4■■□□□ 1.5
CD9-211ENST00000546073 NUTM2BA6NNL0 878 aaPredicted RBP24.39■■□□□ 1.49
CD9-211ENST00000546073 NUTM2EB1AL46 878 aaPredicted RBP24.39■■□□□ 1.49
CD9-211ENST00000546073 NUTM2AQ8IVF1 878 aaPredicted RBP24.39■■□□□ 1.49
CD9-211ENST00000546073 PPIP5K1Q6PFW1 1433 aa24.38■■□□□ 1.49
CD9-211ENST00000546073 ZNF692Q9BU19 519 aaPredicted RBP24.38■■□□□ 1.49
CD9-211ENST00000546073 ACEP12821 1306 aa24.37■■□□□ 1.49
CD9-211ENST00000546073 ATP7BP35670 1465 aa24.37■■□□□ 1.49
CD9-211ENST00000546073 HDGFL2Q7Z4V5 671 aaPredicted RBP24.36■■□□□ 1.49
CD9-211ENST00000546073 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
CD9-211ENST00000546073 ARHGEF10O15013 1369 aa24.35■■□□□ 1.49
CD9-211ENST00000546073 TERF2IPQ9NYB0 399 aa24.35■■□□□ 1.49
CD9-211ENST00000546073 COL16A1Q07092 1604 aaPredicted RBP24.35■■□□□ 1.49
CD9-211ENST00000546073 SBNO1A3KN83 1393 aa24.34■■□□□ 1.49
CD9-211ENST00000546073 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
CD9-211ENST00000546073 TESK2Q96S53 571 aa24.34■■□□□ 1.49
CD9-211ENST00000546073 SPATA31A3Q5VYP0 1347 aa24.34■■□□□ 1.49
CD9-211ENST00000546073 ITSN1Q15811 1721 aa24.33■■□□□ 1.49
CD9-211ENST00000546073 HSPA5P11021 654 aaKnown RBP24.32■■□□□ 1.48
CD9-211ENST00000546073 POLR3GLQ9BT43 218 aa24.31■■□□□ 1.48
CD9-211ENST00000546073 BRD4O60885 1362 aaPredicted RBP24.3■■□□□ 1.48
CD9-211ENST00000546073 PNPLA6Q8IY17 1366 aa24.3■■□□□ 1.48
CD9-211ENST00000546073 PXDNQ92626 1479 aa24.3■■□□□ 1.48
CD9-211ENST00000546073 POLR3AO14802 1390 aaPredicted RBP24.29■■□□□ 1.48
CD9-211ENST00000546073 DISP3Q9P2K9 1392 aa24.29■■□□□ 1.48
CD9-211ENST00000546073 NINLQ9Y2I6 1382 aa24.29■■□□□ 1.48
CD9-211ENST00000546073 TNS3Q68CZ2 1445 aa24.29■■□□□ 1.48
CD9-211ENST00000546073 USP32Q8NFA0 1604 aa24.29■■□□□ 1.48
CD9-211ENST00000546073 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
CD9-211ENST00000546073 ABTB2Q8N961 1025 aa24.28■■□□□ 1.48
CD9-211ENST00000546073 RGPD8O14715 1765 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms