RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ADAMTS2O95450 1211 aa25.21■■□□□ 1.63
CPSF7-225ENST00000545934 NGLY1Q96IV0 654 aa25.21■■□□□ 1.63
CPSF7-225ENST00000545934 MYOM2P54296 1465 aa25.21■■□□□ 1.63
CPSF7-225ENST00000545934 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
CPSF7-225ENST00000545934 TECPR2O15040 1411 aa25.19■■□□□ 1.62
CPSF7-225ENST00000545934 FMN2Q9NZ56 1722 aa25.18■■□□□ 1.62
CPSF7-225ENST00000545934 FNBP4Q8N3X1 1017 aaPredicted RBP25.18■■□□□ 1.62
CPSF7-225ENST00000545934 ATRNO75882 1429 aa25.18■■□□□ 1.62
CPSF7-225ENST00000545934 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.17■■□□□ 1.62
CPSF7-225ENST00000545934 SPATA31E1Q6ZUB1 1445 aa25.16■■□□□ 1.62
CPSF7-225ENST00000545934 USP21Q9UK80 565 aa25.15■■□□□ 1.62
CPSF7-225ENST00000545934 TRPC5Q9UL62 973 aaPredicted RBP25.14■■□□□ 1.62
CPSF7-225ENST00000545934 ADGRF5Q8IZF2 1346 aa25.13■■□□□ 1.61
CPSF7-225ENST00000545934 KIF1AQ12756 1690 aa25.13■■□□□ 1.61
CPSF7-225ENST00000545934 RGPD8O14715 1765 aaPredicted RBP25.13■■□□□ 1.61
CPSF7-225ENST00000545934 NPHP3Q7Z494 1330 aa25.12■■□□□ 1.61
CPSF7-225ENST00000545934 ATAD2Q6PL18 1390 aa25.12■■□□□ 1.61
CPSF7-225ENST00000545934 BCL9LQ86UU0 1499 aa25.12■■□□□ 1.61
CPSF7-225ENST00000545934 CCDC144AA2RUR9 1427 aa25.11■■□□□ 1.61
CPSF7-225ENST00000545934 LRPPRCP42704 1394 aaKnown RBP25.1■■□□□ 1.61
CPSF7-225ENST00000545934 FOXD1Q16676 465 aa25.1■■□□□ 1.61
CPSF7-225ENST00000545934 ESCO1Q5FWF5 840 aa25.1■■□□□ 1.61
CPSF7-225ENST00000545934 ABCC11Q96J66 1382 aa25.08■■□□□ 1.61
CPSF7-225ENST00000545934 ANKRD30BQ9BXX2 1392 aa25.08■■□□□ 1.61
CPSF7-225ENST00000545934 EP400Q96L91 3159 aa25.08■■□□□ 1.61
CPSF7-225ENST00000545934 PIK3C2GO75747 1445 aa25.08■■□□□ 1.61
CPSF7-225ENST00000545934 WAPLQ7Z5K2 1190 aa25.05■■□□□ 1.6
CPSF7-225ENST00000545934 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
CPSF7-225ENST00000545934 FOXO3O43524 673 aa25.04■■□□□ 1.6
CPSF7-225ENST00000545934 BRWD3Q6RI45 1802 aa25.04■■□□□ 1.6
CPSF7-225ENST00000545934 GLI3P10071 1580 aa25.03■■□□□ 1.6
CPSF7-225ENST00000545934 USP32Q8NFA0 1604 aa25.03■■□□□ 1.6
CPSF7-225ENST00000545934 ABCA3Q99758 1704 aa25.03■■□□□ 1.6
CPSF7-225ENST00000545934 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
CPSF7-225ENST00000545934 XPCQ01831 940 aaPredicted RBP25.01■■□□□ 1.59
CPSF7-225ENST00000545934 STK26Q9P289 416 aa25.01■■□□□ 1.59
CPSF7-225ENST00000545934 SLIT2O94813 1529 aa25.01■■□□□ 1.59
CPSF7-225ENST00000545934 RGL3Q3MIN7 710 aa25■■□□□ 1.59
CPSF7-225ENST00000545934 MPHOSPH9Q99550 1183 aa25■■□□□ 1.59
CPSF7-225ENST00000545934 NRXN1Q9ULB1 1477 aa25■■□□□ 1.59
CPSF7-225ENST00000545934 PLCH1Q4KWH8 1693 aa24.99■■□□□ 1.59
CPSF7-225ENST00000545934 TMEM132EQ6IEE7 984 aa24.99■■□□□ 1.59
CPSF7-225ENST00000545934 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
CPSF7-225ENST00000545934 SPATA31A3Q5VYP0 1347 aa24.98■■□□□ 1.59
CPSF7-225ENST00000545934 NUTM2FA1L443 756 aa24.98■■□□□ 1.59
CPSF7-225ENST00000545934 SIRT1Q96EB6 747 aa24.97■■□□□ 1.59
CPSF7-225ENST00000545934 GJD4Q96KN9 370 aaPredicted RBP24.97■■□□□ 1.59
CPSF7-225ENST00000545934 RALGAPBQ86X10 1494 aa24.95■■□□□ 1.58
CPSF7-225ENST00000545934 CCDC125Q86Z20 511 aa24.94■■□□□ 1.58
CPSF7-225ENST00000545934 UNC5CLQ8IV45 518 aa24.92■■□□□ 1.58
CPSF7-225ENST00000545934 C14orf93Q9H972 538 aaKnown RBP24.92■■□□□ 1.58
CPSF7-225ENST00000545934 TNS3Q68CZ2 1445 aa24.91■■□□□ 1.58
CPSF7-225ENST00000545934 SRCAPQ6ZRS2 3230 aa24.9■■□□□ 1.58
CPSF7-225ENST00000545934 ADGRB2O60241 1585 aa24.9■■□□□ 1.58
CPSF7-225ENST00000545934 KRT28Q7Z3Y7 464 aa24.9■■□□□ 1.58
CPSF7-225ENST00000545934 TRPM3Q9HCF6 1732 aaPredicted RBP24.89■■□□□ 1.58
CPSF7-225ENST00000545934 DLC1Q96QB1 1528 aa24.89■■□□□ 1.57
CPSF7-225ENST00000545934 NRAPQ86VF7 1730 aa24.87■■□□□ 1.57
CPSF7-225ENST00000545934 SBNO1A3KN83 1393 aa24.86■■□□□ 1.57
CPSF7-225ENST00000545934 ZRANB1Q9UGI0 708 aa24.86■■□□□ 1.57
CPSF7-225ENST00000545934 PHF8Q9UPP1 1060 aa24.86■■□□□ 1.57
CPSF7-225ENST00000545934 ALS2Q96Q42 1657 aa24.85■■□□□ 1.57
CPSF7-225ENST00000545934 DHX57Q6P158 1386 aaKnown RBP24.85■■□□□ 1.57
CPSF7-225ENST00000545934 CFAP70Q5T0N1 1121 aa24.85■■□□□ 1.57
CPSF7-225ENST00000545934 ADGRB1O14514 1584 aa24.84■■□□□ 1.57
CPSF7-225ENST00000545934 BLMP54132 1417 aaPredicted RBP24.84■■□□□ 1.57
CPSF7-225ENST00000545934 ACIN1Q9UKV3 1341 aaKnown RBP24.84■■□□□ 1.57
CPSF7-225ENST00000545934 ANKARQ7Z5J8 1434 aa24.83■■□□□ 1.57
CPSF7-225ENST00000545934 CRYBG1Q9Y4K1 1723 aa24.83■■□□□ 1.57
CPSF7-225ENST00000545934 PSME1Q06323 249 aa24.81■■□□□ 1.56
CPSF7-225ENST00000545934 VPS72Q15906 364 aa24.81■■□□□ 1.56
CPSF7-225ENST00000545934 ARHGEF10O15013 1369 aa24.8■■□□□ 1.56
CPSF7-225ENST00000545934 ONECUT3O60422 494 aaPredicted RBP24.79■■□□□ 1.56
CPSF7-225ENST00000545934 CABLES1Q8TDN4 633 aa24.79■■□□□ 1.56
CPSF7-225ENST00000545934 PRAM1Q96QH2 718 aa24.79■■□□□ 1.56
CPSF7-225ENST00000545934 COL14A1Q05707 1796 aaKnown RBP24.77■■□□□ 1.56
CPSF7-225ENST00000545934 SEPT12Q8IYM1 358 aa24.76■■□□□ 1.55
CPSF7-225ENST00000545934 ITSN1Q15811 1721 aa24.73■■□□□ 1.55
CPSF7-225ENST00000545934 TULP4Q9NRJ4 1543 aa24.73■■□□□ 1.55
CPSF7-225ENST00000545934 HAP1P54257 671 aaPredicted RBP24.73■■□□□ 1.55
CPSF7-225ENST00000545934 SAFB2Q14151 953 aaKnown RBP eCLIP24.73■■□□□ 1.55
CPSF7-225ENST00000545934 ARHGEF28Q8N1W1 1705 aaKnown RBP24.72■■□□□ 1.55
CPSF7-225ENST00000545934 LRP5O75197 1615 aa24.72■■□□□ 1.55
CPSF7-225ENST00000545934 FAM83GA6ND36 823 aa24.72■■□□□ 1.55
CPSF7-225ENST00000545934 PMFBP1Q8TBY8 1022 aa24.71■■□□□ 1.55
CPSF7-225ENST00000545934 RGPD1P0DJD0 1748 aa24.7■■□□□ 1.54
CPSF7-225ENST00000545934 DEFB132Q7Z7B7 95 aa24.7■■□□□ 1.54
CPSF7-225ENST00000545934 POGKQ9P215 609 aa24.69■■□□□ 1.54
CPSF7-225ENST00000545934 RAB3GAP2Q9H2M9 1393 aa24.68■■□□□ 1.54
CPSF7-225ENST00000545934 PRR36Q9H6K5 1346 aa24.68■■□□□ 1.54
CPSF7-225ENST00000545934 LMOD2Q6P5Q4 547 aa24.68■■□□□ 1.54
CPSF7-225ENST00000545934 THSD7AQ9UPZ6 1657 aa24.68■■□□□ 1.54
CPSF7-225ENST00000545934 KRT27Q7Z3Y8 459 aa24.67■■□□□ 1.54
CPSF7-225ENST00000545934 EIF3AQ14152 1382 aaKnown RBP24.67■■□□□ 1.54
CPSF7-225ENST00000545934 PLEKHG5O94827 1062 aa24.66■■□□□ 1.54
CPSF7-225ENST00000545934 PHRF1Q9P1Y6 1649 aaKnown RBP24.65■■□□□ 1.54
CPSF7-225ENST00000545934 TNS1Q9HBL0 1735 aaKnown RBP24.65■■□□□ 1.54
CPSF7-225ENST00000545934 TRAK1Q9UPV9 953 aa24.64■■□□□ 1.54
CPSF7-225ENST00000545934 CCDC9Q9Y3X0 531 aaKnown RBP24.64■■□□□ 1.54
CPSF7-225ENST00000545934 SF3B2Q13435 895 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms