RNA–Protein interactions for RNA: ENST00000545726.1

PGA4-207, Transcript of pepsinogen 4, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA4, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA4-207ENST00000545726 C19orf44Q9H6X5 657 aa17.14■□□□□ 0.33
PGA4-207ENST00000545726 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.33
PGA4-207ENST00000545726 MSH6P52701 1360 aa17.14■□□□□ 0.33
PGA4-207ENST00000545726 XRN1Q8IZH2 1706 aaKnown RBP17.13■□□□□ 0.33
PGA4-207ENST00000545726 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
PGA4-207ENST00000545726 LTBP4Q8N2S1 1624 aa17.12■□□□□ 0.33
PGA4-207ENST00000545726 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
PGA4-207ENST00000545726 NCOA3Q9Y6Q9 1424 aa17.11■□□□□ 0.33
PGA4-207ENST00000545726 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
PGA4-207ENST00000545726 HSPA5P11021 654 aaKnown RBP17.1■□□□□ 0.33
PGA4-207ENST00000545726 CADPS2Q86UW7 1296 aa17.1■□□□□ 0.33
PGA4-207ENST00000545726 NUTM2FA1L443 756 aa17.09■□□□□ 0.33
PGA4-207ENST00000545726 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
PGA4-207ENST00000545726 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
PGA4-207ENST00000545726 TOM1O60784 492 aa17.08■□□□□ 0.32
PGA4-207ENST00000545726 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
PGA4-207ENST00000545726 EVC2Q86UK5 1308 aa17.07■□□□□ 0.32
PGA4-207ENST00000545726 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
PGA4-207ENST00000545726 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
PGA4-207ENST00000545726 CDK19Q9BWU1 502 aa17.07■□□□□ 0.32
PGA4-207ENST00000545726 WASLO00401 505 aaPredicted RBP17.06■□□□□ 0.32
PGA4-207ENST00000545726 TMF1P82094 1093 aa17.06■□□□□ 0.32
PGA4-207ENST00000545726 ARHGEF28Q8N1W1 1705 aaKnown RBP17.05■□□□□ 0.32
PGA4-207ENST00000545726 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
PGA4-207ENST00000545726 PIP4K2BP78356 416 aa17.04■□□□□ 0.32
PGA4-207ENST00000545726 CABP2Q9NPB3 220 aa17.03■□□□□ 0.32
PGA4-207ENST00000545726 SLAIN2Q9P270 581 aa17.03■□□□□ 0.32
PGA4-207ENST00000545726 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
PGA4-207ENST00000545726 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
PGA4-207ENST00000545726 TESK2Q96S53 571 aa17.01■□□□□ 0.31
PGA4-207ENST00000545726 IQSEC2Q5JU85 1478 aa17■□□□□ 0.31
PGA4-207ENST00000545726 DCCP43146 1447 aa17■□□□□ 0.31
PGA4-207ENST00000545726 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
PGA4-207ENST00000545726 SIPA1L2Q9P2F8 1722 aaPredicted RBP17■□□□□ 0.31
PGA4-207ENST00000545726 QRICH2Q9H0J4 1663 aa17■□□□□ 0.31
PGA4-207ENST00000545726 SBNO2Q9Y2G9 1366 aa16.99■□□□□ 0.31
PGA4-207ENST00000545726 TMC1Q8TDI8 760 aa16.98■□□□□ 0.31
PGA4-207ENST00000545726 NALCNQ8IZF0 1738 aa16.98■□□□□ 0.31
PGA4-207ENST00000545726 MED1Q15648 1581 aaPredicted RBP16.98■□□□□ 0.31
PGA4-207ENST00000545726 CCDC61Q9Y6R9 512 aa16.97■□□□□ 0.31
PGA4-207ENST00000545726 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.3
PGA4-207ENST00000545726 CDC42BPGQ6DT37 1551 aa16.95■□□□□ 0.3
PGA4-207ENST00000545726 PMFBP1Q8TBY8 1022 aa16.95■□□□□ 0.3
PGA4-207ENST00000545726 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
PGA4-207ENST00000545726 MST1RQ04912 1400 aa16.95■□□□□ 0.3
PGA4-207ENST00000545726 C1orf167Q5SNV9 1468 aa16.94■□□□□ 0.3
PGA4-207ENST00000545726 NGDNQ8NEJ9 315 aaKnown RBP16.94■□□□□ 0.3
PGA4-207ENST00000545726 PHF8Q9UPP1 1060 aa16.94■□□□□ 0.3
PGA4-207ENST00000545726 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
PGA4-207ENST00000545726 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
PGA4-207ENST00000545726 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
PGA4-207ENST00000545726 PRR36Q9H6K5 1346 aa16.93■□□□□ 0.3
PGA4-207ENST00000545726 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
PGA4-207ENST00000545726 PSME1Q06323 249 aa16.92■□□□□ 0.3
PGA4-207ENST00000545726 BRINP3Q76B58 766 aa16.92■□□□□ 0.3
PGA4-207ENST00000545726 PUS7Q96PZ0 661 aaKnown RBP16.92■□□□□ 0.3
PGA4-207ENST00000545726 ANKARQ7Z5J8 1434 aa16.92■□□□□ 0.3
PGA4-207ENST00000545726 FOXO3O43524 673 aa16.91■□□□□ 0.3
PGA4-207ENST00000545726 PPIP5K1Q6PFW1 1433 aa16.9■□□□□ 0.3
PGA4-207ENST00000545726 C11orf95C9JLR9 678 aaPredicted RBP16.89■□□□□ 0.29
PGA4-207ENST00000545726 HDGFL2Q7Z4V5 671 aaPredicted RBP16.89■□□□□ 0.29
PGA4-207ENST00000545726 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
PGA4-207ENST00000545726 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
PGA4-207ENST00000545726 DDX17Q92841 729 aaKnown RBP16.88■□□□□ 0.29
PGA4-207ENST00000545726 TERF2IPQ9NYB0 399 aa16.88■□□□□ 0.29
PGA4-207ENST00000545726 ATP7BP35670 1465 aa16.87■□□□□ 0.29
PGA4-207ENST00000545726 PLEKHG3A1L390 1219 aa16.87■□□□□ 0.29
PGA4-207ENST00000545726 XPCQ01831 940 aaPredicted RBP16.87■□□□□ 0.29
PGA4-207ENST00000545726 ACEP12821 1306 aa16.87■□□□□ 0.29
PGA4-207ENST00000545726 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
PGA4-207ENST00000545726 NPHP3Q7Z494 1330 aa16.87■□□□□ 0.29
PGA4-207ENST00000545726 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
PGA4-207ENST00000545726 KRT28Q7Z3Y7 464 aa16.86■□□□□ 0.29
PGA4-207ENST00000545726 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
PGA4-207ENST00000545726 ZNF692Q9BU19 519 aaPredicted RBP16.85■□□□□ 0.29
PGA4-207ENST00000545726 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
PGA4-207ENST00000545726 WASHC2AQ641Q2 1341 aa16.84■□□□□ 0.29
PGA4-207ENST00000545726 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
PGA4-207ENST00000545726 CCDC7Q96M83 1385 aa16.83■□□□□ 0.28
PGA4-207ENST00000545726 ROBO1Q9Y6N7 1651 aa16.81■□□□□ 0.28
PGA4-207ENST00000545726 USP32Q8NFA0 1604 aa16.81■□□□□ 0.28
PGA4-207ENST00000545726 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
PGA4-207ENST00000545726 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
PGA4-207ENST00000545726 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
PGA4-207ENST00000545726 PANK3Q9H999 370 aa16.8■□□□□ 0.28
PGA4-207ENST00000545726 RGPD8O14715 1765 aaPredicted RBP16.79■□□□□ 0.28
PGA4-207ENST00000545726 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
PGA4-207ENST00000545726 HSPA1LP34931 641 aa16.79■□□□□ 0.28
PGA4-207ENST00000545726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
PGA4-207ENST00000545726 POLR3AO14802 1390 aaPredicted RBP16.78■□□□□ 0.28
PGA4-207ENST00000545726 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
PGA4-207ENST00000545726 A0A1W2PP64 1363 aa16.77■□□□□ 0.27
PGA4-207ENST00000545726 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.27
PGA4-207ENST00000545726 SOS2Q07890 1332 aaPredicted RBP16.76■□□□□ 0.27
PGA4-207ENST00000545726 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
PGA4-207ENST00000545726 ABTB2Q8N961 1025 aa16.76■□□□□ 0.27
PGA4-207ENST00000545726 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
PGA4-207ENST00000545726 USP6P35125 1406 aa16.74■□□□□ 0.27
PGA4-207ENST00000545726 CPSF1Q10570 1443 aaKnown RBP16.74■□□□□ 0.27
PGA4-207ENST00000545726 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms