RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 STK26Q9P289 416 aa31.21■■■□□ 2.59
SCARB1-210ENST00000545493 FMN2Q9NZ56 1722 aa31.2■■■□□ 2.58
SCARB1-210ENST00000545493 ORAI2Q96SN7 254 aa31.19■■■□□ 2.58
SCARB1-210ENST00000545493 WAPLQ7Z5K2 1190 aa31.18■■■□□ 2.58
SCARB1-210ENST00000545493 MEX3CQ5U5Q3 659 aaKnown RBP31.17■■■□□ 2.58
SCARB1-210ENST00000545493 C14orf93Q9H972 538 aaKnown RBP31.17■■■□□ 2.58
SCARB1-210ENST00000545493 LRRC59Q96AG4 307 aaKnown RBP31.16■■■□□ 2.58
SCARB1-210ENST00000545493 ADGRB1O14514 1584 aa31.15■■■□□ 2.58
SCARB1-210ENST00000545493 HRCP23327 699 aa31.14■■■□□ 2.58
SCARB1-210ENST00000545493 SOS2Q07890 1332 aaPredicted RBP31.14■■■□□ 2.58
SCARB1-210ENST00000545493 CFAP70Q5T0N1 1121 aa31.13■■■□□ 2.57
SCARB1-210ENST00000545493 NUTM2BA6NNL0 878 aaPredicted RBP31.12■■■□□ 2.57
SCARB1-210ENST00000545493 NUTM2EB1AL46 878 aaPredicted RBP31.12■■■□□ 2.57
SCARB1-210ENST00000545493 NUTM2AQ8IVF1 878 aaPredicted RBP31.12■■■□□ 2.57
SCARB1-210ENST00000545493 COL22A1Q8NFW1 1626 aaPredicted RBP31.12■■■□□ 2.57
SCARB1-210ENST00000545493 PXDNQ92626 1479 aa31.11■■■□□ 2.57
SCARB1-210ENST00000545493 DLC1Q96QB1 1528 aa31.11■■■□□ 2.57
SCARB1-210ENST00000545493 KIF1AQ12756 1690 aa31.08■■■□□ 2.57
SCARB1-210ENST00000545493 DHX57Q6P158 1386 aaKnown RBP31.07■■■□□ 2.56
SCARB1-210ENST00000545493 ZNF772Q68DY9 489 aaPredicted RBP31.06■■■□□ 2.56
SCARB1-210ENST00000545493 ESCO1Q5FWF5 840 aa31.05■■■□□ 2.56
SCARB1-210ENST00000545493 SIRT1Q96EB6 747 aa31.05■■■□□ 2.56
SCARB1-210ENST00000545493 ADGRB2O60241 1585 aa31.05■■■□□ 2.56
SCARB1-210ENST00000545493 NUTM2FA1L443 756 aa31.03■■■□□ 2.56
SCARB1-210ENST00000545493 AFF2P51816 1311 aa31.02■■■□□ 2.56
SCARB1-210ENST00000545493 NPHP3Q7Z494 1330 aa31.02■■■□□ 2.56
SCARB1-210ENST00000545493 RGPD8O14715 1765 aaPredicted RBP31.02■■■□□ 2.56
SCARB1-210ENST00000545493 USP32Q8NFA0 1604 aa30.99■■■□□ 2.55
SCARB1-210ENST00000545493 PRAM1Q96QH2 718 aa30.98■■■□□ 2.55
SCARB1-210ENST00000545493 DCAF11Q8TEB1 546 aa30.97■■■□□ 2.55
SCARB1-210ENST00000545493 C8orf37Q96NL8 207 aa30.97■■■□□ 2.55
SCARB1-210ENST00000545493 ARHGEF28Q8N1W1 1705 aaKnown RBP30.95■■■□□ 2.55
SCARB1-210ENST00000545493 XPCQ01831 940 aaPredicted RBP30.95■■■□□ 2.55
SCARB1-210ENST00000545493 FOXO3O43524 673 aa30.94■■■□□ 2.54
SCARB1-210ENST00000545493 SAFB2Q14151 953 aaKnown RBP eCLIP30.94■■■□□ 2.54
SCARB1-210ENST00000545493 KDM2AQ9Y2K7 1162 aa30.94■■■□□ 2.54
SCARB1-210ENST00000545493 MARF1Q9Y4F3 1742 aaKnown RBP30.94■■■□□ 2.54
SCARB1-210ENST00000545493 CDK12Q9NYV4 1490 aaPredicted RBP30.93■■■□□ 2.54
SCARB1-210ENST00000545493 ADAMTS2O95450 1211 aa30.92■■■□□ 2.54
SCARB1-210ENST00000545493 TRAK1Q9UPV9 953 aa30.89■■■□□ 2.54
SCARB1-210ENST00000545493 ANKARQ7Z5J8 1434 aa30.89■■■□□ 2.53
SCARB1-210ENST00000545493 STAC3Q96MF2 364 aa30.88■■■□□ 2.53
SCARB1-210ENST00000545493 KIAA1210Q9ULL0 1709 aa30.87■■■□□ 2.53
SCARB1-210ENST00000545493 RXRBP28702 533 aa30.87■■■□□ 2.53
SCARB1-210ENST00000545493 RGS12O14924 1447 aa30.87■■■□□ 2.53
SCARB1-210ENST00000545493 POGKQ9P215 609 aa30.86■■■□□ 2.53
SCARB1-210ENST00000545493 TULP4Q9NRJ4 1543 aa30.85■■■□□ 2.53
SCARB1-210ENST00000545493 ABCA3Q99758 1704 aa30.84■■■□□ 2.53
SCARB1-210ENST00000545493 TNS3Q68CZ2 1445 aa30.84■■■□□ 2.53
SCARB1-210ENST00000545493 PHF8Q9UPP1 1060 aa30.84■■■□□ 2.53
SCARB1-210ENST00000545493 SPATA31A3Q5VYP0 1347 aa30.83■■■□□ 2.53
SCARB1-210ENST00000545493 NGLY1Q96IV0 654 aa30.82■■■□□ 2.52
SCARB1-210ENST00000545493 HIRIP3Q9BW71 556 aaPredicted RBP30.81■■■□□ 2.52
SCARB1-210ENST00000545493 TRPM3Q9HCF6 1732 aaPredicted RBP30.81■■■□□ 2.52
SCARB1-210ENST00000545493 MINK1Q8N4C8 1332 aaPredicted RBP30.79■■■□□ 2.52
SCARB1-210ENST00000545493 KRT28Q7Z3Y7 464 aa30.78■■■□□ 2.52
SCARB1-210ENST00000545493 FNBP4Q8N3X1 1017 aaPredicted RBP30.78■■■□□ 2.52
SCARB1-210ENST00000545493 QTRT2Q9H974 415 aaKnown RBP30.78■■■□□ 2.52
SCARB1-210ENST00000545493 ATRNO75882 1429 aa30.78■■■□□ 2.52
SCARB1-210ENST00000545493 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.78■■■□□ 2.52
SCARB1-210ENST00000545493 PRR36Q9H6K5 1346 aa30.77■■■□□ 2.52
SCARB1-210ENST00000545493 RBM6P78332 1123 aaKnown RBP30.76■■■□□ 2.51
SCARB1-210ENST00000545493 USP21Q9UK80 565 aa30.76■■■□□ 2.51
SCARB1-210ENST00000545493 SBNO1A3KN83 1393 aa30.76■■■□□ 2.51
SCARB1-210ENST00000545493 EIF3AQ14152 1382 aaKnown RBP30.76■■■□□ 2.51
SCARB1-210ENST00000545493 BCL9LQ86UU0 1499 aa30.76■■■□□ 2.51
SCARB1-210ENST00000545493 ITSN1Q15811 1721 aa30.75■■■□□ 2.51
SCARB1-210ENST00000545493 ATP7BP35670 1465 aa30.75■■■□□ 2.51
SCARB1-210ENST00000545493 ALS2Q96Q42 1657 aa30.73■■■□□ 2.51
SCARB1-210ENST00000545493 PMFBP1Q8TBY8 1022 aa30.72■■■□□ 2.51
SCARB1-210ENST00000545493 TOPAZ1Q8N9V7 1692 aa30.71■■■□□ 2.51
SCARB1-210ENST00000545493 WASLO00401 505 aaPredicted RBP30.71■■■□□ 2.51
SCARB1-210ENST00000545493 SLIT2O94813 1529 aa30.71■■■□□ 2.51
SCARB1-210ENST00000545493 TRPC5Q9UL62 973 aaPredicted RBP30.7■■■□□ 2.51
SCARB1-210ENST00000545493 PLCH1Q4KWH8 1693 aa30.69■■■□□ 2.5
SCARB1-210ENST00000545493 UPF1Q92900 1129 aaKnown RBP eCLIP30.69■■■□□ 2.5
SCARB1-210ENST00000545493 PSME1Q06323 249 aa30.68■■■□□ 2.5
SCARB1-210ENST00000545493 ARHGEF10O15013 1369 aa30.67■■■□□ 2.5
SCARB1-210ENST00000545493 CRYBG1Q9Y4K1 1723 aa30.67■■■□□ 2.5
SCARB1-210ENST00000545493 GLI3P10071 1580 aa30.64■■■□□ 2.5
SCARB1-210ENST00000545493 NBPF1Q3BBV0 1214 aa30.64■■■□□ 2.5
SCARB1-210ENST00000545493 NWD2Q9ULI1 1742 aa30.63■■■□□ 2.49
SCARB1-210ENST00000545493 EP400Q96L91 3159 aa30.63■■■□□ 2.49
SCARB1-210ENST00000545493 CABLES1Q8TDN4 633 aa30.62■■■□□ 2.49
SCARB1-210ENST00000545493 TRPM1Q7Z4N2 1603 aa30.62■■■□□ 2.49
SCARB1-210ENST00000545493 QRICH2Q9H0J4 1663 aa30.6■■■□□ 2.49
SCARB1-210ENST00000545493 GPRASP1Q5JY77 1395 aa30.59■■■□□ 2.49
SCARB1-210ENST00000545493 NRAPQ86VF7 1730 aa30.59■■■□□ 2.49
SCARB1-210ENST00000545493 LMOD2Q6P5Q4 547 aa30.58■■■□□ 2.49
SCARB1-210ENST00000545493 RALGAPBQ86X10 1494 aa30.57■■■□□ 2.48
SCARB1-210ENST00000545493 L3MBTL2Q969R5 705 aa30.57■■■□□ 2.48
SCARB1-210ENST00000545493 SIN3AQ96ST3 1273 aa30.57■■■□□ 2.48
SCARB1-210ENST00000545493 PLEKHG5O94827 1062 aa30.56■■■□□ 2.48
SCARB1-210ENST00000545493 HAP1P54257 671 aaPredicted RBP30.55■■■□□ 2.48
SCARB1-210ENST00000545493 UNC5CLQ8IV45 518 aa30.55■■■□□ 2.48
SCARB1-210ENST00000545493 NUDT16Q96DE0 195 aaKnown RBP30.55■■■□□ 2.48
SCARB1-210ENST00000545493 CDK19Q9BWU1 502 aa30.53■■■□□ 2.48
SCARB1-210ENST00000545493 PHRF1Q9P1Y6 1649 aaKnown RBP30.53■■■□□ 2.48
SCARB1-210ENST00000545493 NGDNQ8NEJ9 315 aaKnown RBP30.52■■■□□ 2.48
SCARB1-210ENST00000545493 GJD4Q96KN9 370 aaPredicted RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms