RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 METP08581 1390 aa19.74■□□□□ 0.75
TSEN54-203ENST00000545228 ZNF772Q68DY9 489 aaPredicted RBP19.74■□□□□ 0.75
TSEN54-203ENST00000545228 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
TSEN54-203ENST00000545228 PTCH1Q13635 1447 aa19.71■□□□□ 0.75
TSEN54-203ENST00000545228 RALGAPBQ86X10 1494 aa19.71■□□□□ 0.75
TSEN54-203ENST00000545228 MST1RQ04912 1400 aa19.7■□□□□ 0.74
TSEN54-203ENST00000545228 CFAP70Q5T0N1 1121 aa19.7■□□□□ 0.74
TSEN54-203ENST00000545228 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
TSEN54-203ENST00000545228 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
TSEN54-203ENST00000545228 YTHDC2Q9H6S0 1430 aaKnown RBP19.69■□□□□ 0.74
TSEN54-203ENST00000545228 ADGRB1O14514 1584 aa19.69■□□□□ 0.74
TSEN54-203ENST00000545228 TECPR2O15040 1411 aa19.68■□□□□ 0.74
TSEN54-203ENST00000545228 ADGRL3Q9HAR2 1447 aa19.68■□□□□ 0.74
TSEN54-203ENST00000545228 DLC1Q96QB1 1528 aa19.68■□□□□ 0.74
TSEN54-203ENST00000545228 NUTM2BA6NNL0 878 aaPredicted RBP19.68■□□□□ 0.74
TSEN54-203ENST00000545228 NUTM2EB1AL46 878 aaPredicted RBP19.68■□□□□ 0.74
TSEN54-203ENST00000545228 NUTM2AQ8IVF1 878 aaPredicted RBP19.68■□□□□ 0.74
TSEN54-203ENST00000545228 EIF3AQ14152 1382 aaKnown RBP19.67■□□□□ 0.74
TSEN54-203ENST00000545228 ABCC11Q96J66 1382 aa19.67■□□□□ 0.74
TSEN54-203ENST00000545228 LRRC59Q96AG4 307 aaKnown RBP19.66■□□□□ 0.74
TSEN54-203ENST00000545228 NHSL1Q5SYE7 1610 aa19.65■□□□□ 0.74
TSEN54-203ENST00000545228 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
TSEN54-203ENST00000545228 ARHGEF28Q8N1W1 1705 aaKnown RBP19.65■□□□□ 0.74
TSEN54-203ENST00000545228 GPRASP1Q5JY77 1395 aa19.63■□□□□ 0.73
TSEN54-203ENST00000545228 RXRBP28702 533 aa19.63■□□□□ 0.73
TSEN54-203ENST00000545228 SIRT1Q96EB6 747 aa19.63■□□□□ 0.73
TSEN54-203ENST00000545228 NALCNQ8IZF0 1738 aa19.62■□□□□ 0.73
TSEN54-203ENST00000545228 TMEM132EQ6IEE7 984 aa19.62■□□□□ 0.73
TSEN54-203ENST00000545228 DDX17Q92841 729 aaKnown RBP19.61■□□□□ 0.73
TSEN54-203ENST00000545228 AFF2P51816 1311 aa19.6■□□□□ 0.73
TSEN54-203ENST00000545228 CARD11Q9BXL7 1154 aa19.6■□□□□ 0.73
TSEN54-203ENST00000545228 STK26Q9P289 416 aa19.6■□□□□ 0.73
TSEN54-203ENST00000545228 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
TSEN54-203ENST00000545228 C1orf167Q5SNV9 1468 aa19.59■□□□□ 0.73
TSEN54-203ENST00000545228 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.73
TSEN54-203ENST00000545228 SLC24A1O60721 1099 aa19.58■□□□□ 0.72
TSEN54-203ENST00000545228 UPF1Q92900 1129 aaKnown RBP eCLIP19.58■□□□□ 0.72
TSEN54-203ENST00000545228 POGKQ9P215 609 aa19.58■□□□□ 0.72
TSEN54-203ENST00000545228 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
TSEN54-203ENST00000545228 CDK12Q9NYV4 1490 aaPredicted RBP19.57■□□□□ 0.72
TSEN54-203ENST00000545228 C8orf37Q96NL8 207 aa19.57■□□□□ 0.72
TSEN54-203ENST00000545228 QRICH2Q9H0J4 1663 aa19.56■□□□□ 0.72
TSEN54-203ENST00000545228 TRAK1Q9UPV9 953 aa19.56■□□□□ 0.72
TSEN54-203ENST00000545228 NBPF1Q3BBV0 1214 aa19.55■□□□□ 0.72
TSEN54-203ENST00000545228 ADGRB2O60241 1585 aa19.53■□□□□ 0.72
TSEN54-203ENST00000545228 CDC42BPGQ6DT37 1551 aa19.53■□□□□ 0.72
TSEN54-203ENST00000545228 ORAI2Q96SN7 254 aa19.53■□□□□ 0.72
TSEN54-203ENST00000545228 SOS2Q07890 1332 aaPredicted RBP19.52■□□□□ 0.72
TSEN54-203ENST00000545228 PRAM1Q96QH2 718 aa19.52■□□□□ 0.72
TSEN54-203ENST00000545228 QTRT2Q9H974 415 aaKnown RBP19.52■□□□□ 0.72
TSEN54-203ENST00000545228 CENPJQ9HC77 1338 aaPredicted RBP19.51■□□□□ 0.71
TSEN54-203ENST00000545228 ADAMTS2O95450 1211 aa19.51■□□□□ 0.71
TSEN54-203ENST00000545228 RBM6P78332 1123 aaKnown RBP19.51■□□□□ 0.71
TSEN54-203ENST00000545228 NGLY1Q96IV0 654 aa19.51■□□□□ 0.71
TSEN54-203ENST00000545228 USP47Q96K76 1375 aa19.48■□□□□ 0.71
TSEN54-203ENST00000545228 SBNO2Q9Y2G9 1366 aa19.48■□□□□ 0.71
TSEN54-203ENST00000545228 RGS12O14924 1447 aa19.47■□□□□ 0.71
TSEN54-203ENST00000545228 ITSN1Q15811 1721 aa19.47■□□□□ 0.71
TSEN54-203ENST00000545228 FMN2Q9NZ56 1722 aa19.47■□□□□ 0.71
TSEN54-203ENST00000545228 WAPLQ7Z5K2 1190 aa19.46■□□□□ 0.71
TSEN54-203ENST00000545228 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
TSEN54-203ENST00000545228 ESCO1Q5FWF5 840 aa19.45■□□□□ 0.7
TSEN54-203ENST00000545228 NPHP3Q7Z494 1330 aa19.45■□□□□ 0.7
TSEN54-203ENST00000545228 USP21Q9UK80 565 aa19.44■□□□□ 0.7
TSEN54-203ENST00000545228 PLEKHH1Q9ULM0 1364 aa19.44■□□□□ 0.7
TSEN54-203ENST00000545228 SAFB2Q14151 953 aaKnown RBP eCLIP19.43■□□□□ 0.7
TSEN54-203ENST00000545228 EVC2Q86UK5 1308 aa19.42■□□□□ 0.7
TSEN54-203ENST00000545228 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
TSEN54-203ENST00000545228 COL22A1Q8NFW1 1626 aaPredicted RBP19.41■□□□□ 0.7
TSEN54-203ENST00000545228 FNBP4Q8N3X1 1017 aaPredicted RBP19.41■□□□□ 0.7
TSEN54-203ENST00000545228 TRPC5Q9UL62 973 aaPredicted RBP19.41■□□□□ 0.7
TSEN54-203ENST00000545228 MINK1Q8N4C8 1332 aaPredicted RBP19.41■□□□□ 0.7
TSEN54-203ENST00000545228 TULP4Q9NRJ4 1543 aa19.41■□□□□ 0.7
TSEN54-203ENST00000545228 KIF1AQ12756 1690 aa19.4■□□□□ 0.7
TSEN54-203ENST00000545228 FOXO3O43524 673 aa19.39■□□□□ 0.69
TSEN54-203ENST00000545228 CDCA8Q53HL2 280 aa19.39■□□□□ 0.69
TSEN54-203ENST00000545228 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
TSEN54-203ENST00000545228 WASLO00401 505 aaPredicted RBP19.38■□□□□ 0.69
TSEN54-203ENST00000545228 PXDNQ92626 1479 aa19.38■□□□□ 0.69
TSEN54-203ENST00000545228 ST20-MTHFSA0A0A6YYL1 179 aa19.37■□□□□ 0.69
TSEN54-203ENST00000545228 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
TSEN54-203ENST00000545228 ATAD2Q6PL18 1390 aa19.36■□□□□ 0.69
TSEN54-203ENST00000545228 TMF1P82094 1093 aa19.36■□□□□ 0.69
TSEN54-203ENST00000545228 ATRNO75882 1429 aa19.35■□□□□ 0.69
TSEN54-203ENST00000545228 SRPK2P78362 688 aaKnown RBP19.35■□□□□ 0.69
TSEN54-203ENST00000545228 HIRIP3Q9BW71 556 aaPredicted RBP19.35■□□□□ 0.69
TSEN54-203ENST00000545228 RGPD8O14715 1765 aaPredicted RBP19.34■□□□□ 0.69
TSEN54-203ENST00000545228 PUS7Q96PZ0 661 aaKnown RBP19.34■□□□□ 0.69
TSEN54-203ENST00000545228 TOPAZ1Q8N9V7 1692 aa19.33■□□□□ 0.68
TSEN54-203ENST00000545228 CDK19Q9BWU1 502 aa19.32■□□□□ 0.68
TSEN54-203ENST00000545228 BCL9LQ86UU0 1499 aa19.31■□□□□ 0.68
TSEN54-203ENST00000545228 NINLQ9Y2I6 1382 aa19.31■□□□□ 0.68
TSEN54-203ENST00000545228 ATP7BP35670 1465 aa19.3■□□□□ 0.68
TSEN54-203ENST00000545228 USP32Q8NFA0 1604 aa19.3■□□□□ 0.68
TSEN54-203ENST00000545228 HSPA5P11021 654 aaKnown RBP19.3■□□□□ 0.68
TSEN54-203ENST00000545228 MARF1Q9Y4F3 1742 aaKnown RBP19.3■□□□□ 0.68
TSEN54-203ENST00000545228 SPATA31A3Q5VYP0 1347 aa19.29■□□□□ 0.68
TSEN54-203ENST00000545228 TESK2Q96S53 571 aa19.29■□□□□ 0.68
TSEN54-203ENST00000545228 CCDC61Q9Y6R9 512 aa19.28■□□□□ 0.68
TSEN54-203ENST00000545228 KRT28Q7Z3Y7 464 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms