RNA–Protein interactions for RNA: ENST00000545028.2

KLHL1-202, Transcript of kelch like family member 1, humanhuman

TSL 2 BASIC

Gene KLHL1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1-202ENST00000545028 PARD3Q8TEW0 1356 aa12.32□□□□□ -0.44
KLHL1-202ENST00000545028 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
KLHL1-202ENST00000545028 SPATA31D1Q6ZQQ2 1576 aa12.32□□□□□ -0.44
KLHL1-202ENST00000545028 RALBP1Q15311 655 aa12.31□□□□□ -0.44
KLHL1-202ENST00000545028 CEP170BQ9Y4F5 1589 aaPredicted RBP12.31□□□□□ -0.44
KLHL1-202ENST00000545028 CENPJQ9HC77 1338 aaPredicted RBP12.31□□□□□ -0.44
KLHL1-202ENST00000545028 MYOM1P52179 1685 aa12.31□□□□□ -0.44
KLHL1-202ENST00000545028 TMEM131LA2VDJ0 1609 aa12.31□□□□□ -0.44
KLHL1-202ENST00000545028 METP08581 1390 aa12.3□□□□□ -0.44
KLHL1-202ENST00000545028 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
KLHL1-202ENST00000545028 SETBP1Q9Y6X0 1596 aa12.29□□□□□ -0.44
KLHL1-202ENST00000545028 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
KLHL1-202ENST00000545028 UBAP1LF5GYI3 381 aa12.28□□□□□ -0.44
KLHL1-202ENST00000545028 KDM5AP29375 1690 aaKnown RBP12.28□□□□□ -0.44
KLHL1-202ENST00000545028 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
KLHL1-202ENST00000545028 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
KLHL1-202ENST00000545028 PLEKHG1Q9ULL1 1385 aa12.28□□□□□ -0.44
KLHL1-202ENST00000545028 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
KLHL1-202ENST00000545028 PMFBP1Q8TBY8 1022 aa12.28□□□□□ -0.44
KLHL1-202ENST00000545028 ZBED9Q6R2W3 1325 aa12.28□□□□□ -0.44
KLHL1-202ENST00000545028 BRD4O60885 1362 aaPredicted RBP12.27□□□□□ -0.44
KLHL1-202ENST00000545028 CDCA8Q53HL2 280 aa12.27□□□□□ -0.44
KLHL1-202ENST00000545028 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.44
KLHL1-202ENST00000545028 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
KLHL1-202ENST00000545028 KNSTRNQ9Y448 316 aa12.27□□□□□ -0.45
KLHL1-202ENST00000545028 QRICH2Q9H0J4 1663 aa12.26□□□□□ -0.45
KLHL1-202ENST00000545028 SOX12O15370 315 aa12.26□□□□□ -0.45
KLHL1-202ENST00000545028 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
KLHL1-202ENST00000545028 LMTK3Q96Q04 1460 aa12.26□□□□□ -0.45
KLHL1-202ENST00000545028 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
KLHL1-202ENST00000545028 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
KLHL1-202ENST00000545028 ASXL1Q8IXJ9 1541 aa12.25□□□□□ -0.45
KLHL1-202ENST00000545028 CDK19Q9BWU1 502 aa12.25□□□□□ -0.45
KLHL1-202ENST00000545028 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
KLHL1-202ENST00000545028 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
KLHL1-202ENST00000545028 EVC2Q86UK5 1308 aa12.24□□□□□ -0.45
KLHL1-202ENST00000545028 ARHGEF28Q8N1W1 1705 aaKnown RBP12.24□□□□□ -0.45
KLHL1-202ENST00000545028 LRPPRCP42704 1394 aaKnown RBP12.24□□□□□ -0.45
KLHL1-202ENST00000545028 SLC12A5Q9H2X9 1139 aa12.23□□□□□ -0.45
KLHL1-202ENST00000545028 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
KLHL1-202ENST00000545028 TMEM94Q12767 1356 aa12.22□□□□□ -0.45
KLHL1-202ENST00000545028 C19orf44Q9H6X5 657 aa12.22□□□□□ -0.45
KLHL1-202ENST00000545028 YTHDC2Q9H6S0 1430 aaKnown RBP12.22□□□□□ -0.45
KLHL1-202ENST00000545028 PSME1Q06323 249 aa12.22□□□□□ -0.45
KLHL1-202ENST00000545028 ZFYVE9O95405 1425 aa12.22□□□□□ -0.45
KLHL1-202ENST00000545028 FOXO3O43524 673 aa12.21□□□□□ -0.45
KLHL1-202ENST00000545028 TOM1O60784 492 aa12.21□□□□□ -0.45
KLHL1-202ENST00000545028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.21□□□□□ -0.45
KLHL1-202ENST00000545028 MSH6P52701 1360 aa12.21□□□□□ -0.45
KLHL1-202ENST00000545028 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.45
KLHL1-202ENST00000545028 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
KLHL1-202ENST00000545028 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
KLHL1-202ENST00000545028 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
KLHL1-202ENST00000545028 NUTM2GQ5VZR2 741 aa12.2□□□□□ -0.46
KLHL1-202ENST00000545028 TULP4Q9NRJ4 1543 aa12.2□□□□□ -0.46
KLHL1-202ENST00000545028 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
KLHL1-202ENST00000545028 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
KLHL1-202ENST00000545028 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
KLHL1-202ENST00000545028 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
KLHL1-202ENST00000545028 WASLO00401 505 aaPredicted RBP12.19□□□□□ -0.46
KLHL1-202ENST00000545028 ROBO2Q9HCK4 1378 aa12.19□□□□□ -0.46
KLHL1-202ENST00000545028 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
KLHL1-202ENST00000545028 BCL11AQ9H165 835 aa12.18□□□□□ -0.46
KLHL1-202ENST00000545028 ADAMTS13Q76LX8 1427 aa12.18□□□□□ -0.46
KLHL1-202ENST00000545028 DDX17Q92841 729 aaKnown RBP12.17□□□□□ -0.46
KLHL1-202ENST00000545028 ORAI2Q96SN7 254 aa12.17□□□□□ -0.46
KLHL1-202ENST00000545028 UBR1Q8IWV7 1749 aa12.17□□□□□ -0.46
KLHL1-202ENST00000545028 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
KLHL1-202ENST00000545028 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
KLHL1-202ENST00000545028 SLAIN2Q9P270 581 aa12.16□□□□□ -0.46
KLHL1-202ENST00000545028 NSD3Q9BZ95 1437 aa12.16□□□□□ -0.46
KLHL1-202ENST00000545028 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
KLHL1-202ENST00000545028 ADAMTS8Q9UP79 889 aa12.16□□□□□ -0.46
KLHL1-202ENST00000545028 TERF2IPQ9NYB0 399 aa12.15□□□□□ -0.46
KLHL1-202ENST00000545028 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
KLHL1-202ENST00000545028 ARHGAP23Q9P227 1491 aa12.15□□□□□ -0.46
KLHL1-202ENST00000545028 SLIT1O75093 1534 aa12.15□□□□□ -0.47
KLHL1-202ENST00000545028 PHF8Q9UPP1 1060 aa12.14□□□□□ -0.47
KLHL1-202ENST00000545028 NPC1L1Q9UHC9 1359 aa12.14□□□□□ -0.47
KLHL1-202ENST00000545028 NUTM2BA6NNL0 878 aaPredicted RBP12.13□□□□□ -0.47
KLHL1-202ENST00000545028 NUTM2EB1AL46 878 aaPredicted RBP12.13□□□□□ -0.47
KLHL1-202ENST00000545028 NUTM2AQ8IVF1 878 aaPredicted RBP12.13□□□□□ -0.47
KLHL1-202ENST00000545028 NUDCQ9Y266 331 aa12.13□□□□□ -0.47
KLHL1-202ENST00000545028 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
KLHL1-202ENST00000545028 NRXN3Q9Y4C0 1643 aa12.13□□□□□ -0.47
KLHL1-202ENST00000545028 SMG6Q86US8 1419 aaKnown RBP12.13□□□□□ -0.47
KLHL1-202ENST00000545028 PTPRUQ92729 1446 aa12.13□□□□□ -0.47
KLHL1-202ENST00000545028 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
KLHL1-202ENST00000545028 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
KLHL1-202ENST00000545028 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
KLHL1-202ENST00000545028 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
KLHL1-202ENST00000545028 ABTB2Q8N961 1025 aa12.11□□□□□ -0.47
KLHL1-202ENST00000545028 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
KLHL1-202ENST00000545028 A0A1W2PP64 1363 aa12.1□□□□□ -0.47
KLHL1-202ENST00000545028 NLRP6P59044 892 aa12.1□□□□□ -0.47
KLHL1-202ENST00000545028 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
KLHL1-202ENST00000545028 KRT28Q7Z3Y7 464 aa12.09□□□□□ -0.47
KLHL1-202ENST00000545028 MORC1Q86VD1 984 aa12.09□□□□□ -0.47
KLHL1-202ENST00000545028 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
KLHL1-202ENST00000545028 ACEP12821 1306 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms