RNA–Protein interactions for RNA: ENST00000544882.1

SCNN1A-222, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-222ENST00000544882 CFAP70Q5T0N1 1121 aa23.85■■□□□ 1.41
SCNN1A-222ENST00000544882 ORAI2Q96SN7 254 aa23.84■■□□□ 1.41
SCNN1A-222ENST00000544882 LRP6O75581 1613 aa23.84■■□□□ 1.41
SCNN1A-222ENST00000544882 LAMC1P11047 1609 aa23.84■■□□□ 1.41
SCNN1A-222ENST00000544882 POTEAQ6S8J7 498 aa23.83■■□□□ 1.41
SCNN1A-222ENST00000544882 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.41
SCNN1A-222ENST00000544882 CDC42BPGQ6DT37 1551 aa23.82■■□□□ 1.4
SCNN1A-222ENST00000544882 PLEKHH1Q9ULM0 1364 aa23.82■■□□□ 1.4
SCNN1A-222ENST00000544882 MEX3CQ5U5Q3 659 aaKnown RBP23.82■■□□□ 1.4
SCNN1A-222ENST00000544882 DCAF11Q8TEB1 546 aa23.82■■□□□ 1.4
SCNN1A-222ENST00000544882 KDM2AQ9Y2K7 1162 aa23.82■■□□□ 1.4
SCNN1A-222ENST00000544882 ADGRB1O14514 1584 aa23.79■■□□□ 1.4
SCNN1A-222ENST00000544882 NUTM2BA6NNL0 878 aaPredicted RBP23.79■■□□□ 1.4
SCNN1A-222ENST00000544882 NUTM2EB1AL46 878 aaPredicted RBP23.79■■□□□ 1.4
SCNN1A-222ENST00000544882 NUTM2AQ8IVF1 878 aaPredicted RBP23.79■■□□□ 1.4
SCNN1A-222ENST00000544882 SIRT1Q96EB6 747 aa23.79■■□□□ 1.4
SCNN1A-222ENST00000544882 ESCO1Q5FWF5 840 aa23.77■■□□□ 1.4
SCNN1A-222ENST00000544882 SIN3AQ96ST3 1273 aa23.76■■□□□ 1.39
SCNN1A-222ENST00000544882 PNPLA6Q8IY17 1366 aa23.76■■□□□ 1.39
SCNN1A-222ENST00000544882 NUTM2FA1L443 756 aa23.75■■□□□ 1.39
SCNN1A-222ENST00000544882 SOS2Q07890 1332 aaPredicted RBP23.75■■□□□ 1.39
SCNN1A-222ENST00000544882 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
SCNN1A-222ENST00000544882 FMN2Q9NZ56 1722 aa23.71■■□□□ 1.39
SCNN1A-222ENST00000544882 SAFB2Q14151 953 aaKnown RBP eCLIP23.71■■□□□ 1.39
SCNN1A-222ENST00000544882 PRAM1Q96QH2 718 aa23.71■■□□□ 1.39
SCNN1A-222ENST00000544882 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
SCNN1A-222ENST00000544882 ZNF772Q68DY9 489 aaPredicted RBP23.7■■□□□ 1.38
SCNN1A-222ENST00000544882 POGKQ9P215 609 aa23.7■■□□□ 1.38
SCNN1A-222ENST00000544882 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
SCNN1A-222ENST00000544882 FOXO3O43524 673 aa23.68■■□□□ 1.38
SCNN1A-222ENST00000544882 TRAK1Q9UPV9 953 aa23.68■■□□□ 1.38
SCNN1A-222ENST00000544882 XPCQ01831 940 aaPredicted RBP23.66■■□□□ 1.38
SCNN1A-222ENST00000544882 L3MBTL2Q969R5 705 aa23.66■■□□□ 1.38
SCNN1A-222ENST00000544882 KIAA1210Q9ULL0 1709 aa23.65■■□□□ 1.38
SCNN1A-222ENST00000544882 PXDNQ92626 1479 aa23.65■■□□□ 1.38
SCNN1A-222ENST00000544882 AFF2P51816 1311 aa23.64■■□□□ 1.38
SCNN1A-222ENST00000544882 NEUROD1Q13562 356 aa23.64■■□□□ 1.37
SCNN1A-222ENST00000544882 C8orf37Q96NL8 207 aa23.64■■□□□ 1.37
SCNN1A-222ENST00000544882 RGPD8O14715 1765 aaPredicted RBP23.64■■□□□ 1.37
SCNN1A-222ENST00000544882 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.37
SCNN1A-222ENST00000544882 ADAMTS2O95450 1211 aa23.63■■□□□ 1.37
SCNN1A-222ENST00000544882 KIF1AQ12756 1690 aa23.63■■□□□ 1.37
SCNN1A-222ENST00000544882 COL22A1Q8NFW1 1626 aaPredicted RBP23.6■■□□□ 1.37
SCNN1A-222ENST00000544882 NBPF1Q3BBV0 1214 aa23.6■■□□□ 1.37
SCNN1A-222ENST00000544882 PHF8Q9UPP1 1060 aa23.6■■□□□ 1.37
SCNN1A-222ENST00000544882 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
SCNN1A-222ENST00000544882 ADGRB2O60241 1585 aa23.58■■□□□ 1.37
SCNN1A-222ENST00000544882 NGLY1Q96IV0 654 aa23.58■■□□□ 1.37
SCNN1A-222ENST00000544882 HIRIP3Q9BW71 556 aaPredicted RBP23.58■■□□□ 1.37
SCNN1A-222ENST00000544882 RXRBP28702 533 aa23.57■■□□□ 1.36
SCNN1A-222ENST00000544882 KRT28Q7Z3Y7 464 aa23.57■■□□□ 1.36
SCNN1A-222ENST00000544882 USP32Q8NFA0 1604 aa23.56■■□□□ 1.36
SCNN1A-222ENST00000544882 ANKARQ7Z5J8 1434 aa23.56■■□□□ 1.36
SCNN1A-222ENST00000544882 TRPM1Q7Z4N2 1603 aa23.55■■□□□ 1.36
SCNN1A-222ENST00000544882 SPATA31A3Q5VYP0 1347 aa23.54■■□□□ 1.36
SCNN1A-222ENST00000544882 QTRT2Q9H974 415 aaKnown RBP23.53■■□□□ 1.36
SCNN1A-222ENST00000544882 WASLO00401 505 aaPredicted RBP23.52■■□□□ 1.36
SCNN1A-222ENST00000544882 PSME1Q06323 249 aa23.52■■□□□ 1.36
SCNN1A-222ENST00000544882 PMFBP1Q8TBY8 1022 aa23.51■■□□□ 1.35
SCNN1A-222ENST00000544882 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
SCNN1A-222ENST00000544882 EIF3AQ14152 1382 aaKnown RBP23.51■■□□□ 1.35
SCNN1A-222ENST00000544882 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
SCNN1A-222ENST00000544882 NBPF8Q3BBV2 869 aa23.49■■□□□ 1.35
SCNN1A-222ENST00000544882 USP21Q9UK80 565 aa23.49■■□□□ 1.35
SCNN1A-222ENST00000544882 PRR36Q9H6K5 1346 aa23.49■■□□□ 1.35
SCNN1A-222ENST00000544882 TNS3Q68CZ2 1445 aa23.49■■□□□ 1.35
SCNN1A-222ENST00000544882 MARF1Q9Y4F3 1742 aaKnown RBP23.48■■□□□ 1.35
SCNN1A-222ENST00000544882 RBM6P78332 1123 aaKnown RBP23.48■■□□□ 1.35
SCNN1A-222ENST00000544882 FNBP4Q8N3X1 1017 aaPredicted RBP23.48■■□□□ 1.35
SCNN1A-222ENST00000544882 CDK12Q9NYV4 1490 aaPredicted RBP23.48■■□□□ 1.35
SCNN1A-222ENST00000544882 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
SCNN1A-222ENST00000544882 LMOD2Q6P5Q4 547 aa23.45■■□□□ 1.34
SCNN1A-222ENST00000544882 TRPC5Q9UL62 973 aaPredicted RBP23.44■■□□□ 1.34
SCNN1A-222ENST00000544882 GPRASP1Q5JY77 1395 aa23.42■■□□□ 1.34
SCNN1A-222ENST00000544882 QRICH2Q9H0J4 1663 aa23.42■■□□□ 1.34
SCNN1A-222ENST00000544882 PLEKHG5O94827 1062 aa23.42■■□□□ 1.34
SCNN1A-222ENST00000544882 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
SCNN1A-222ENST00000544882 HAP1P54257 671 aaPredicted RBP23.41■■□□□ 1.34
SCNN1A-222ENST00000544882 NGDNQ8NEJ9 315 aaKnown RBP23.41■■□□□ 1.34
SCNN1A-222ENST00000544882 CABLES1Q8TDN4 633 aa23.41■■□□□ 1.34
SCNN1A-222ENST00000544882 NUDT16Q96DE0 195 aaKnown RBP23.41■■□□□ 1.34
SCNN1A-222ENST00000544882 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
SCNN1A-222ENST00000544882 RGS12O14924 1447 aa23.41■■□□□ 1.34
SCNN1A-222ENST00000544882 ATRNO75882 1429 aa23.41■■□□□ 1.34
SCNN1A-222ENST00000544882 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
SCNN1A-222ENST00000544882 BCL9LQ86UU0 1499 aa23.4■■□□□ 1.34
SCNN1A-222ENST00000544882 ITSN1Q15811 1721 aa23.39■■□□□ 1.34
SCNN1A-222ENST00000544882 TRPM3Q9HCF6 1732 aaPredicted RBP23.39■■□□□ 1.34
SCNN1A-222ENST00000544882 ATP7BP35670 1465 aa23.39■■□□□ 1.34
SCNN1A-222ENST00000544882 ROCK2O75116 1388 aaKnown RBP23.38■■□□□ 1.33
SCNN1A-222ENST00000544882 CENPJQ9HC77 1338 aaPredicted RBP23.36■■□□□ 1.33
SCNN1A-222ENST00000544882 TOPAZ1Q8N9V7 1692 aa23.36■■□□□ 1.33
SCNN1A-222ENST00000544882 UPF1Q92900 1129 aaKnown RBP eCLIP23.36■■□□□ 1.33
SCNN1A-222ENST00000544882 ABCA3Q99758 1704 aa23.36■■□□□ 1.33
SCNN1A-222ENST00000544882 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
SCNN1A-222ENST00000544882 SLIT2O94813 1529 aa23.34■■□□□ 1.33
SCNN1A-222ENST00000544882 UNC5CLQ8IV45 518 aa23.34■■□□□ 1.33
SCNN1A-222ENST00000544882 RALGAPBQ86X10 1494 aa23.34■■□□□ 1.33
SCNN1A-222ENST00000544882 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.33■■□□□ 1.33
SCNN1A-222ENST00000544882 PAK3O75914 559 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms