RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 CDC42BPGQ6DT37 1551 aa24.2■■□□□ 1.46
PDCD2-213ENST00000544866 MST1RQ04912 1400 aa24.18■■□□□ 1.46
PDCD2-213ENST00000544866 NBPF8Q3BBV2 869 aa24.18■■□□□ 1.46
PDCD2-213ENST00000544866 CCER1Q8TC90 406 aaPredicted RBP24.18■■□□□ 1.46
PDCD2-213ENST00000544866 SLAIN2Q9P270 581 aa24.18■■□□□ 1.46
PDCD2-213ENST00000544866 TRAK1Q9UPV9 953 aa24.18■■□□□ 1.46
PDCD2-213ENST00000544866 PRAM1Q96QH2 718 aa24.16■■□□□ 1.46
PDCD2-213ENST00000544866 FMN2Q9NZ56 1722 aa24.14■■□□□ 1.45
PDCD2-213ENST00000544866 ADGRB2O60241 1585 aa24.13■■□□□ 1.45
PDCD2-213ENST00000544866 HSPA1LP34931 641 aa24.11■■□□□ 1.45
PDCD2-213ENST00000544866 POGKQ9P215 609 aa24.11■■□□□ 1.45
PDCD2-213ENST00000544866 GPRASP1Q5JY77 1395 aa24.11■■□□□ 1.45
PDCD2-213ENST00000544866 RALGAPBQ86X10 1494 aa24.11■■□□□ 1.45
PDCD2-213ENST00000544866 SAFB2Q14151 953 aaKnown RBP eCLIP24.1■■□□□ 1.45
PDCD2-213ENST00000544866 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
PDCD2-213ENST00000544866 C1orf167Q5SNV9 1468 aa24.1■■□□□ 1.45
PDCD2-213ENST00000544866 TIMELESSQ9UNS1 1208 aa24.08■■□□□ 1.45
PDCD2-213ENST00000544866 NHSL1Q5SYE7 1610 aa24.06■■□□□ 1.44
PDCD2-213ENST00000544866 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
PDCD2-213ENST00000544866 RGPD8O14715 1765 aaPredicted RBP24.06■■□□□ 1.44
PDCD2-213ENST00000544866 BRINP3Q76B58 766 aa24.06■■□□□ 1.44
PDCD2-213ENST00000544866 PHLPP1O60346 1717 aa24.06■■□□□ 1.44
PDCD2-213ENST00000544866 QRICH2Q9H0J4 1663 aa24.05■■□□□ 1.44
PDCD2-213ENST00000544866 USP32Q8NFA0 1604 aa24.03■■□□□ 1.44
PDCD2-213ENST00000544866 MINK1Q8N4C8 1332 aaPredicted RBP24.03■■□□□ 1.44
PDCD2-213ENST00000544866 COL16A1Q07092 1604 aaPredicted RBP24.02■■□□□ 1.44
PDCD2-213ENST00000544866 HIRIP3Q9BW71 556 aaPredicted RBP24.01■■□□□ 1.43
PDCD2-213ENST00000544866 CENPJQ9HC77 1338 aaPredicted RBP24■■□□□ 1.43
PDCD2-213ENST00000544866 ORAI2Q96SN7 254 aa23.99■■□□□ 1.43
PDCD2-213ENST00000544866 NUTM2FA1L443 756 aa23.98■■□□□ 1.43
PDCD2-213ENST00000544866 CARD11Q9BXL7 1154 aa23.98■■□□□ 1.43
PDCD2-213ENST00000544866 KIF1AQ12756 1690 aa23.97■■□□□ 1.43
PDCD2-213ENST00000544866 TULP4Q9NRJ4 1543 aa23.97■■□□□ 1.43
PDCD2-213ENST00000544866 ANKARQ7Z5J8 1434 aa23.96■■□□□ 1.43
PDCD2-213ENST00000544866 EIF3AQ14152 1382 aaKnown RBP23.96■■□□□ 1.43
PDCD2-213ENST00000544866 WASLO00401 505 aaPredicted RBP23.96■■□□□ 1.43
PDCD2-213ENST00000544866 ESCO1Q5FWF5 840 aa23.94■■□□□ 1.42
PDCD2-213ENST00000544866 ITSN1Q15811 1721 aa23.93■■□□□ 1.42
PDCD2-213ENST00000544866 PRR36Q9H6K5 1346 aa23.92■■□□□ 1.42
PDCD2-213ENST00000544866 DDX17Q92841 729 aaKnown RBP23.92■■□□□ 1.42
PDCD2-213ENST00000544866 ATP7BP35670 1465 aa23.92■■□□□ 1.42
PDCD2-213ENST00000544866 TOPAZ1Q8N9V7 1692 aa23.92■■□□□ 1.42
PDCD2-213ENST00000544866 SHPRHQ149N8 1683 aa23.89■■□□□ 1.42
PDCD2-213ENST00000544866 CDK19Q9BWU1 502 aa23.89■■□□□ 1.41
PDCD2-213ENST00000544866 PXDNQ92626 1479 aa23.88■■□□□ 1.41
PDCD2-213ENST00000544866 SOS2Q07890 1332 aaPredicted RBP23.87■■□□□ 1.41
PDCD2-213ENST00000544866 PHF8Q9UPP1 1060 aa23.87■■□□□ 1.41
PDCD2-213ENST00000544866 SBNO2Q9Y2G9 1366 aa23.87■■□□□ 1.41
PDCD2-213ENST00000544866 NPHP3Q7Z494 1330 aa23.85■■□□□ 1.41
PDCD2-213ENST00000544866 NUDT16Q96DE0 195 aaKnown RBP23.85■■□□□ 1.41
PDCD2-213ENST00000544866 JCADQ9P266 1359 aa23.85■■□□□ 1.41
PDCD2-213ENST00000544866 FOXO3O43524 673 aa23.84■■□□□ 1.41
PDCD2-213ENST00000544866 MED1Q15648 1581 aaPredicted RBP23.82■■□□□ 1.4
PDCD2-213ENST00000544866 USP47Q96K76 1375 aa23.82■■□□□ 1.4
PDCD2-213ENST00000544866 PMFBP1Q8TBY8 1022 aa23.81■■□□□ 1.4
PDCD2-213ENST00000544866 CABP2Q9NPB3 220 aa23.81■■□□□ 1.4
PDCD2-213ENST00000544866 EVC2Q86UK5 1308 aa23.81■■□□□ 1.4
PDCD2-213ENST00000544866 SRPK2P78362 688 aaKnown RBP23.8■■□□□ 1.4
PDCD2-213ENST00000544866 LRRC59Q96AG4 307 aaKnown RBP23.8■■□□□ 1.4
PDCD2-213ENST00000544866 TRPM3Q9HCF6 1732 aaPredicted RBP23.79■■□□□ 1.4
PDCD2-213ENST00000544866 ST20-MTHFSA0A0A6YYL1 179 aa23.79■■□□□ 1.4
PDCD2-213ENST00000544866 XPCQ01831 940 aaPredicted RBP23.79■■□□□ 1.4
PDCD2-213ENST00000544866 TESK2Q96S53 571 aa23.78■■□□□ 1.4
PDCD2-213ENST00000544866 CCDC61Q9Y6R9 512 aa23.78■■□□□ 1.4
PDCD2-213ENST00000544866 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
PDCD2-213ENST00000544866 COL22A1Q8NFW1 1626 aaPredicted RBP23.77■■□□□ 1.4
PDCD2-213ENST00000544866 KRT28Q7Z3Y7 464 aa23.76■■□□□ 1.39
PDCD2-213ENST00000544866 PPIP5K1Q6PFW1 1433 aa23.76■■□□□ 1.39
PDCD2-213ENST00000544866 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
PDCD2-213ENST00000544866 POLR3AO14802 1390 aaPredicted RBP23.74■■□□□ 1.39
PDCD2-213ENST00000544866 LRP6O75581 1613 aa23.73■■□□□ 1.39
PDCD2-213ENST00000544866 SPATA31A6Q5VVP1 1343 aa23.73■■□□□ 1.39
PDCD2-213ENST00000544866 ALS2Q96Q42 1657 aa23.73■■□□□ 1.39
PDCD2-213ENST00000544866 NGDNQ8NEJ9 315 aaKnown RBP23.72■■□□□ 1.39
PDCD2-213ENST00000544866 SPATA31A3Q5VYP0 1347 aa23.72■■□□□ 1.39
PDCD2-213ENST00000544866 SBNO1A3KN83 1393 aa23.72■■□□□ 1.39
PDCD2-213ENST00000544866 TNS3Q68CZ2 1445 aa23.72■■□□□ 1.39
PDCD2-213ENST00000544866 ACEP12821 1306 aa23.71■■□□□ 1.39
PDCD2-213ENST00000544866 PSME1Q06323 249 aa23.71■■□□□ 1.39
PDCD2-213ENST00000544866 AKAP12Q02952 1782 aa23.7■■□□□ 1.39
PDCD2-213ENST00000544866 ATAD2Q6PL18 1390 aa23.7■■□□□ 1.38
PDCD2-213ENST00000544866 CABP1Q9NZU7 370 aa23.68■■□□□ 1.38
PDCD2-213ENST00000544866 DISP3Q9P2K9 1392 aa23.67■■□□□ 1.38
PDCD2-213ENST00000544866 ABCA3Q99758 1704 aa23.67■■□□□ 1.38
PDCD2-213ENST00000544866 PUS7Q96PZ0 661 aaKnown RBP23.66■■□□□ 1.38
PDCD2-213ENST00000544866 SLC24A1O60721 1099 aa23.65■■□□□ 1.38
PDCD2-213ENST00000544866 MON2Q7Z3U7 1717 aa23.64■■□□□ 1.37
PDCD2-213ENST00000544866 MARF1Q9Y4F3 1742 aaKnown RBP23.64■■□□□ 1.37
PDCD2-213ENST00000544866 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.37
PDCD2-213ENST00000544866 NUTM2BA6NNL0 878 aaPredicted RBP23.63■■□□□ 1.37
PDCD2-213ENST00000544866 NUTM2EB1AL46 878 aaPredicted RBP23.63■■□□□ 1.37
PDCD2-213ENST00000544866 NUTM2AQ8IVF1 878 aaPredicted RBP23.63■■□□□ 1.37
PDCD2-213ENST00000544866 ARHGEF10O15013 1369 aa23.63■■□□□ 1.37
PDCD2-213ENST00000544866 HSPA5P11021 654 aaKnown RBP23.62■■□□□ 1.37
PDCD2-213ENST00000544866 EIF4G2P78344 907 aaKnown RBP eCLIP23.62■■□□□ 1.37
PDCD2-213ENST00000544866 TMF1P82094 1093 aa23.62■■□□□ 1.37
PDCD2-213ENST00000544866 NRKQ7Z2Y5 1582 aa23.61■■□□□ 1.37
PDCD2-213ENST00000544866 USP6P35125 1406 aa23.61■■□□□ 1.37
PDCD2-213ENST00000544866 CD163L1Q9NR16 1453 aa23.61■■□□□ 1.37
PDCD2-213ENST00000544866 CPSF1Q10570 1443 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms