RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 ATP10BO94823 1461 aa16.04■□□□□ 0.16
PDZD4-209ENST00000544474 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
PDZD4-209ENST00000544474 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
PDZD4-209ENST00000544474 GTF2E1P29083 439 aaPredicted RBP16.04■□□□□ 0.16
PDZD4-209ENST00000544474 GAS2L3Q86XJ1 694 aa16.04■□□□□ 0.16
PDZD4-209ENST00000544474 CROCC2H7BZ55 1655 aa16.04■□□□□ 0.16
PDZD4-209ENST00000544474 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
PDZD4-209ENST00000544474 EIF3AQ14152 1382 aaKnown RBP16.03■□□□□ 0.16
PDZD4-209ENST00000544474 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
PDZD4-209ENST00000544474 TMEM132EQ6IEE7 984 aa16.03■□□□□ 0.16
PDZD4-209ENST00000544474 USP19O94966 1318 aa16.03■□□□□ 0.16
PDZD4-209ENST00000544474 E9PCH4 1651 aa16.03■□□□□ 0.16
PDZD4-209ENST00000544474 STK26Q9P289 416 aa16.03■□□□□ 0.16
PDZD4-209ENST00000544474 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
PDZD4-209ENST00000544474 TRAK1Q9UPV9 953 aa16.02■□□□□ 0.16
PDZD4-209ENST00000544474 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.15
PDZD4-209ENST00000544474 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.15
PDZD4-209ENST00000544474 CFAP70Q5T0N1 1121 aa16.01■□□□□ 0.15
PDZD4-209ENST00000544474 STAC3Q96MF2 364 aa16.01■□□□□ 0.15
PDZD4-209ENST00000544474 ZNF521Q96K83 1311 aa16.01■□□□□ 0.15
PDZD4-209ENST00000544474 IGSF3O75054 1194 aa16■□□□□ 0.15
PDZD4-209ENST00000544474 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
PDZD4-209ENST00000544474 RIPK4P57078 832 aa16■□□□□ 0.15
PDZD4-209ENST00000544474 PDE3AQ14432 1141 aa16■□□□□ 0.15
PDZD4-209ENST00000544474 PDZRN4Q6ZMN7 1036 aaPredicted RBP16■□□□□ 0.15
PDZD4-209ENST00000544474 TSC1Q92574 1164 aa16■□□□□ 0.15
PDZD4-209ENST00000544474 C1orf115Q9H7X2 142 aa16■□□□□ 0.15
PDZD4-209ENST00000544474 TRPM1Q7Z4N2 1603 aa16■□□□□ 0.15
PDZD4-209ENST00000544474 RWDD1Q9H446 243 aaPredicted RBP16■□□□□ 0.15
PDZD4-209ENST00000544474 NKTRP30414 1462 aaKnown RBP16■□□□□ 0.15
PDZD4-209ENST00000544474 ABCC10Q5T3U5 1492 aa15.99■□□□□ 0.15
PDZD4-209ENST00000544474 CAVIN1Q6NZI2 390 aaKnown RBP15.99■□□□□ 0.15
PDZD4-209ENST00000544474 SMC4Q9NTJ3 1288 aa15.99■□□□□ 0.15
PDZD4-209ENST00000544474 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
PDZD4-209ENST00000544474 MTERF4Q7Z6M4 381 aaKnown RBP15.98■□□□□ 0.15
PDZD4-209ENST00000544474 PMFBP1Q8TBY8 1022 aa15.98■□□□□ 0.15
PDZD4-209ENST00000544474 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
PDZD4-209ENST00000544474 U2AF1L5P0DN76 240 aaPredicted RBP15.98■□□□□ 0.15
PDZD4-209ENST00000544474 U2AF1Q01081 240 aaKnown RBP eCLIP15.98■□□□□ 0.15
PDZD4-209ENST00000544474 TNPO1Q92973 898 aaKnown RBP15.98■□□□□ 0.15
PDZD4-209ENST00000544474 OFD1O75665 1012 aa15.97■□□□□ 0.15
PDZD4-209ENST00000544474 JARID2Q92833 1246 aaPredicted RBP15.97■□□□□ 0.15
PDZD4-209ENST00000544474 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
PDZD4-209ENST00000544474 MAGI2Q86UL8 1455 aa15.97■□□□□ 0.15
PDZD4-209ENST00000544474 SPAG9O60271 1321 aaKnown RBP15.97■□□□□ 0.15
PDZD4-209ENST00000544474 PLA2R1Q13018 1463 aa15.97■□□□□ 0.15
PDZD4-209ENST00000544474 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
PDZD4-209ENST00000544474 ADCY10Q96PN6 1610 aa15.97■□□□□ 0.15
PDZD4-209ENST00000544474 TBC1D32Q96NH3 1257 aa15.97■□□□□ 0.15
PDZD4-209ENST00000544474 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.15
PDZD4-209ENST00000544474 MLECQ14165 292 aa15.96■□□□□ 0.15
PDZD4-209ENST00000544474 EFCAB2Q5VUJ9 269 aa15.96■□□□□ 0.15
PDZD4-209ENST00000544474 SSFA2P28290 1259 aa15.96■□□□□ 0.14
PDZD4-209ENST00000544474 IPO4Q8TEX9 1081 aaKnown RBP15.96■□□□□ 0.14
PDZD4-209ENST00000544474 GBP4Q96PP9 640 aa15.96■□□□□ 0.14
PDZD4-209ENST00000544474 ISY1Q9ULR0 285 aaKnown RBP15.95■□□□□ 0.14
PDZD4-209ENST00000544474 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
PDZD4-209ENST00000544474 UTP14CQ5TAP6 766 aaKnown RBP15.94■□□□□ 0.14
PDZD4-209ENST00000544474 ANKRD45Q5TZF3 282 aa15.94■□□□□ 0.14
PDZD4-209ENST00000544474 NGEFQ8N5V2 710 aa15.94■□□□□ 0.14
PDZD4-209ENST00000544474 ANTXR1Q9H6X2 564 aa15.94■□□□□ 0.14
PDZD4-209ENST00000544474 ARHGAP5Q13017 1502 aa15.94■□□□□ 0.14
PDZD4-209ENST00000544474 TERF1P54274 439 aa15.94■□□□□ 0.14
PDZD4-209ENST00000544474 PAXIP1Q6ZW49 1069 aaPredicted RBP15.94■□□□□ 0.14
PDZD4-209ENST00000544474 MORC1Q86VD1 984 aa15.94■□□□□ 0.14
PDZD4-209ENST00000544474 NUP160Q12769 1436 aa15.94■□□□□ 0.14
PDZD4-209ENST00000544474 DMTNQ08495 405 aa15.94■□□□□ 0.14
PDZD4-209ENST00000544474 TRMT2AQ8IZ69 625 aaKnown RBP15.94■□□□□ 0.14
PDZD4-209ENST00000544474 DDX11L8A8MPP1 907 aa15.93■□□□□ 0.14
PDZD4-209ENST00000544474 WWC1Q8IX03 1113 aa15.93■□□□□ 0.14
PDZD4-209ENST00000544474 ZSCAN30Q86W11 494 aa15.93■□□□□ 0.14
PDZD4-209ENST00000544474 WDR7Q9Y4E6 1490 aa15.92■□□□□ 0.14
PDZD4-209ENST00000544474 TCP11L2Q8N4U5 519 aa15.92■□□□□ 0.14
PDZD4-209ENST00000544474 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
PDZD4-209ENST00000544474 DTNBO60941 627 aa15.92■□□□□ 0.14
PDZD4-209ENST00000544474 PPP4R3BQ5MIZ7 849 aa15.92■□□□□ 0.14
PDZD4-209ENST00000544474 UQCRHLA0A096LP55 91 aa15.91■□□□□ 0.14
PDZD4-209ENST00000544474 UQCRHP07919 91 aa15.91■□□□□ 0.14
PDZD4-209ENST00000544474 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
PDZD4-209ENST00000544474 EIF2AK4Q9P2K8 1649 aaKnown RBP15.91■□□□□ 0.14
PDZD4-209ENST00000544474 PIK3C2GO75747 1445 aa15.91■□□□□ 0.14
PDZD4-209ENST00000544474 ARHGEF5Q12774 1597 aa15.9■□□□□ 0.14
PDZD4-209ENST00000544474 SYCP2Q9BX26 1530 aa15.9■□□□□ 0.14
PDZD4-209ENST00000544474 PLCD3Q8N3E9 789 aa15.9■□□□□ 0.14
PDZD4-209ENST00000544474 PRPF40AO75400 957 aaKnown RBP15.88■□□□□ 0.13
PDZD4-209ENST00000544474 CBX1P83916 185 aa15.88■□□□□ 0.13
PDZD4-209ENST00000544474 ZNF830Q96NB3 372 aaPredicted RBP15.88■□□□□ 0.13
PDZD4-209ENST00000544474 RAPGEF3O95398 923 aa15.88■□□□□ 0.13
PDZD4-209ENST00000544474 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
PDZD4-209ENST00000544474 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
PDZD4-209ENST00000544474 SCAF11Q99590 1463 aaKnown RBP15.87■□□□□ 0.13
PDZD4-209ENST00000544474 FBLN1P23142 703 aa15.87■□□□□ 0.13
PDZD4-209ENST00000544474 NINLQ9Y2I6 1382 aa15.87■□□□□ 0.13
PDZD4-209ENST00000544474 CCDC173Q0VFZ6 552 aa15.87■□□□□ 0.13
PDZD4-209ENST00000544474 RUNDC1Q96C34 613 aa15.87■□□□□ 0.13
PDZD4-209ENST00000544474 SLC12A5Q9H2X9 1139 aa15.87■□□□□ 0.13
PDZD4-209ENST00000544474 CD2BP2O95400 341 aaKnown RBP15.86■□□□□ 0.13
PDZD4-209ENST00000544474 DZIP1LQ8IYY4 767 aaKnown RBP15.86■□□□□ 0.13
PDZD4-209ENST00000544474 ABCA8O94911 1581 aa15.86■□□□□ 0.13
PDZD4-209ENST00000544474 SAMD9LQ8IVG5 1584 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms