RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 WASHC2CQ9Y4E1 1318 aa14.44□□□□□ -0.1
MDH1-216ENST00000544381 CHRM1P11229 460 aaPredicted RBP14.43□□□□□ -0.1
MDH1-216ENST00000544381 ANKRD30BQ9BXX2 1392 aa14.43□□□□□ -0.1
MDH1-216ENST00000544381 ARHGAP23Q9P227 1491 aa14.41□□□□□ -0.1
MDH1-216ENST00000544381 THEMISQ8N1K5 641 aaPredicted RBP14.41□□□□□ -0.1
MDH1-216ENST00000544381 TTLL13PA6NNM8 815 aa14.41□□□□□ -0.1
MDH1-216ENST00000544381 SLC39A7Q92504 469 aa14.41□□□□□ -0.1
MDH1-216ENST00000544381 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
MDH1-216ENST00000544381 IQGAP3Q86VI3 1631 aa14.4□□□□□ -0.1
MDH1-216ENST00000544381 RGS17Q9UGC6 210 aaPredicted RBP14.4□□□□□ -0.1
MDH1-216ENST00000544381 SLIT1O75093 1534 aa14.39□□□□□ -0.11
MDH1-216ENST00000544381 C7P10643 843 aa14.39□□□□□ -0.11
MDH1-216ENST00000544381 KANK1Q14678 1352 aa14.38□□□□□ -0.11
MDH1-216ENST00000544381 METRNQ9UJH8 293 aa14.38□□□□□ -0.11
MDH1-216ENST00000544381 SCAF11Q99590 1463 aaKnown RBP14.37□□□□□ -0.11
MDH1-216ENST00000544381 PRDM15P57071 1507 aaPredicted RBP14.37□□□□□ -0.11
MDH1-216ENST00000544381 PPP1R15AO75807 674 aaPredicted RBP14.37□□□□□ -0.11
MDH1-216ENST00000544381 TMEM106CQ9BVX2 250 aa14.37□□□□□ -0.11
MDH1-216ENST00000544381 PIK3C2BO00750 1634 aa14.36□□□□□ -0.11
MDH1-216ENST00000544381 ZNF467Q7Z7K2 595 aaPredicted RBP14.36□□□□□ -0.11
MDH1-216ENST00000544381 RPRD2Q5VT52 1461 aaKnown RBP14.36□□□□□ -0.11
MDH1-216ENST00000544381 ZNF316A6NFI3 1004 aaPredicted RBP14.35□□□□□ -0.11
MDH1-216ENST00000544381 LTKP29376 864 aa14.35□□□□□ -0.11
MDH1-216ENST00000544381 ARHGAP31Q2M1Z3 1444 aa14.33□□□□□ -0.12
MDH1-216ENST00000544381 TRIM35Q9UPQ4 493 aa14.32□□□□□ -0.12
MDH1-216ENST00000544381 L3MBTL2Q969R5 705 aa14.31□□□□□ -0.12
MDH1-216ENST00000544381 TET3O43151 1660 aa14.31□□□□□ -0.12
MDH1-216ENST00000544381 KDM5AP29375 1690 aaKnown RBP14.31□□□□□ -0.12
MDH1-216ENST00000544381 ROBO1Q9Y6N7 1651 aa14.3□□□□□ -0.12
MDH1-216ENST00000544381 CCDC144AA2RUR9 1427 aa14.28□□□□□ -0.12
MDH1-216ENST00000544381 FAM135BQ49AJ0 1406 aa14.28□□□□□ -0.12
MDH1-216ENST00000544381 SETD1AO15047 1707 aaKnown RBP14.28□□□□□ -0.12
MDH1-216ENST00000544381 NWD1Q149M9 1564 aa14.28□□□□□ -0.12
MDH1-216ENST00000544381 E9PCH4 1651 aa14.28□□□□□ -0.12
MDH1-216ENST00000544381 TMEM2Q9UHN6 1383 aa14.27□□□□□ -0.13
MDH1-216ENST00000544381 POTEB2H3BUK9 544 aa14.26□□□□□ -0.13
MDH1-216ENST00000544381 LMTK2Q8IWU2 1503 aa14.26□□□□□ -0.13
MDH1-216ENST00000544381 POTEAQ6S8J7 498 aa14.25□□□□□ -0.13
MDH1-216ENST00000544381 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
MDH1-216ENST00000544381 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
MDH1-216ENST00000544381 EFCAB6Q5THR3 1501 aa14.25□□□□□ -0.13
MDH1-216ENST00000544381 IER5LQ5T953 404 aa14.24□□□□□ -0.13
MDH1-216ENST00000544381 SPHKAPQ2M3C7 1700 aa14.23□□□□□ -0.13
MDH1-216ENST00000544381 MYO5BQ9ULV0 1848 aa14.23□□□□□ -0.13
MDH1-216ENST00000544381 ADGRB3O60242 1522 aa14.22□□□□□ -0.13
MDH1-216ENST00000544381 SEC24BO95487 1268 aa14.22□□□□□ -0.13
MDH1-216ENST00000544381 PSEN1P49768 467 aa14.22□□□□□ -0.13
MDH1-216ENST00000544381 NOS1P29475 1434 aa14.21□□□□□ -0.13
MDH1-216ENST00000544381 TRPM2O94759 1503 aa14.21□□□□□ -0.14
MDH1-216ENST00000544381 PDAP1Q13442 181 aaKnown RBP14.2□□□□□ -0.14
MDH1-216ENST00000544381 NKTRP30414 1462 aaKnown RBP14.2□□□□□ -0.14
MDH1-216ENST00000544381 CHD2O14647 1828 aaKnown RBP14.2□□□□□ -0.14
MDH1-216ENST00000544381 COL16A1Q07092 1604 aaPredicted RBP14.19□□□□□ -0.14
MDH1-216ENST00000544381 RBM33Q96EV2 1170 aaKnown RBP14.19□□□□□ -0.14
MDH1-216ENST00000544381 PHLPP1O60346 1717 aa14.19□□□□□ -0.14
MDH1-216ENST00000544381 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
MDH1-216ENST00000544381 IDI1Q13907 227 aa14.18□□□□□ -0.14
MDH1-216ENST00000544381 RGL3Q3MIN7 710 aa14.18□□□□□ -0.14
MDH1-216ENST00000544381 DIEXFQ68CQ4 756 aaKnown RBP14.18□□□□□ -0.14
MDH1-216ENST00000544381 DCAF11Q8TEB1 546 aa14.18□□□□□ -0.14
MDH1-216ENST00000544381 COLQQ9Y215 455 aaPredicted RBP14.18□□□□□ -0.14
MDH1-216ENST00000544381 KCNA6P17658 529 aa14.17□□□□□ -0.14
MDH1-216ENST00000544381 NBPF8Q3BBV2 869 aa14.17□□□□□ -0.14
MDH1-216ENST00000544381 ZNF326Q5BKZ1 582 aaKnown RBP14.17□□□□□ -0.14
MDH1-216ENST00000544381 KDM2AQ9Y2K7 1162 aa14.17□□□□□ -0.14
MDH1-216ENST00000544381 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
MDH1-216ENST00000544381 SLC26A8Q96RN1 970 aa14.16□□□□□ -0.14
MDH1-216ENST00000544381 LRP6O75581 1613 aa14.16□□□□□ -0.14
MDH1-216ENST00000544381 CLTCL1P53675 1640 aa14.16□□□□□ -0.14
MDH1-216ENST00000544381 EID1Q9Y6B2 187 aa14.15□□□□□ -0.14
MDH1-216ENST00000544381 GOLGA2Q08379 1002 aa14.15□□□□□ -0.15
MDH1-216ENST00000544381 TMEM131LA2VDJ0 1609 aa14.14□□□□□ -0.15
MDH1-216ENST00000544381 OTUD5Q96G74 571 aa14.14□□□□□ -0.15
MDH1-216ENST00000544381 SPATA31E1Q6ZUB1 1445 aa14.13□□□□□ -0.15
MDH1-216ENST00000544381 EIF4G2P78344 907 aaKnown RBP eCLIP14.13□□□□□ -0.15
MDH1-216ENST00000544381 KIF1BO60333 1816 aa14.12□□□□□ -0.15
MDH1-216ENST00000544381 POTEJP0CG39 1038 aa14.12□□□□□ -0.15
MDH1-216ENST00000544381 PROSER2Q86WR7 435 aaPredicted RBP14.12□□□□□ -0.15
MDH1-216ENST00000544381 PLCG2P16885 1265 aa14.11□□□□□ -0.15
MDH1-216ENST00000544381 MAMSTRQ6ZN01 415 aa14.11□□□□□ -0.15
MDH1-216ENST00000544381 STAC3Q96MF2 364 aa14.11□□□□□ -0.15
MDH1-216ENST00000544381 HIRIP3Q9BW71 556 aaPredicted RBP14.11□□□□□ -0.15
MDH1-216ENST00000544381 AHDC1Q5TGY3 1603 aaPredicted RBP14.1□□□□□ -0.15
MDH1-216ENST00000544381 SHPRHQ149N8 1683 aa14.1□□□□□ -0.15
MDH1-216ENST00000544381 PLEKHG1Q9ULL1 1385 aa14.1□□□□□ -0.15
MDH1-216ENST00000544381 RIOK3O14730 519 aaKnown RBP14.1□□□□□ -0.15
MDH1-216ENST00000544381 HSPA5P11021 654 aaKnown RBP14.1□□□□□ -0.15
MDH1-216ENST00000544381 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
MDH1-216ENST00000544381 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.1□□□□□ -0.15
MDH1-216ENST00000544381 DIP2AQ14689 1571 aa14.09□□□□□ -0.15
MDH1-216ENST00000544381 RALGAPBQ86X10 1494 aa14.09□□□□□ -0.15
MDH1-216ENST00000544381 JCADQ9P266 1359 aa14.09□□□□□ -0.15
MDH1-216ENST00000544381 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
MDH1-216ENST00000544381 ADAMTS13Q76LX8 1427 aa14.09□□□□□ -0.15
MDH1-216ENST00000544381 PRAG1Q86YV5 1406 aa14.09□□□□□ -0.15
MDH1-216ENST00000544381 MSH6P52701 1360 aa14.08□□□□□ -0.16
MDH1-216ENST00000544381 CHGAP10645 457 aaKnown RBP14.08□□□□□ -0.16
MDH1-216ENST00000544381 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
MDH1-216ENST00000544381 OCEL1Q9H607 264 aa14.08□□□□□ -0.16
MDH1-216ENST00000544381 SLAIN2Q9P270 581 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms