RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 LRP6O75581 1613 aa15.73■□□□□ 0.11
CHEK1-218ENST00000544373 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
CHEK1-218ENST00000544373 YTHDC2Q9H6S0 1430 aaKnown RBP15.73■□□□□ 0.11
CHEK1-218ENST00000544373 SPATA31A6Q5VVP1 1343 aa15.72■□□□□ 0.11
CHEK1-218ENST00000544373 MYOM2P54296 1465 aa15.71■□□□□ 0.11
CHEK1-218ENST00000544373 NUTM2FA1L443 756 aa15.71■□□□□ 0.11
CHEK1-218ENST00000544373 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
CHEK1-218ENST00000544373 NUTM2BA6NNL0 878 aaPredicted RBP15.7■□□□□ 0.1
CHEK1-218ENST00000544373 NUTM2EB1AL46 878 aaPredicted RBP15.7■□□□□ 0.1
CHEK1-218ENST00000544373 NUTM2AQ8IVF1 878 aaPredicted RBP15.7■□□□□ 0.1
CHEK1-218ENST00000544373 LRRC59Q96AG4 307 aaKnown RBP15.7■□□□□ 0.1
CHEK1-218ENST00000544373 ESCO1Q5FWF5 840 aa15.69■□□□□ 0.1
CHEK1-218ENST00000544373 DHX57Q6P158 1386 aaKnown RBP15.68■□□□□ 0.1
CHEK1-218ENST00000544373 MEX3CQ5U5Q3 659 aaKnown RBP15.68■□□□□ 0.1
CHEK1-218ENST00000544373 SOS2Q07890 1332 aaPredicted RBP15.67■□□□□ 0.1
CHEK1-218ENST00000544373 SAFB2Q14151 953 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHEK1-218ENST00000544373 SIRT1Q96EB6 747 aa15.67■□□□□ 0.1
CHEK1-218ENST00000544373 NHSL1Q5SYE7 1610 aa15.67■□□□□ 0.1
CHEK1-218ENST00000544373 PRAM1Q96QH2 718 aa15.67■□□□□ 0.1
CHEK1-218ENST00000544373 PNPLA6Q8IY17 1366 aa15.66■□□□□ 0.1
CHEK1-218ENST00000544373 CDC42BPGQ6DT37 1551 aa15.65■□□□□ 0.1
CHEK1-218ENST00000544373 FOXO3O43524 673 aa15.65■□□□□ 0.1
CHEK1-218ENST00000544373 XPCQ01831 940 aaPredicted RBP15.65■□□□□ 0.1
CHEK1-218ENST00000544373 SHPRHQ149N8 1683 aa15.65■□□□□ 0.1
CHEK1-218ENST00000544373 TRAK1Q9UPV9 953 aa15.63■□□□□ 0.09
CHEK1-218ENST00000544373 ADGRB1O14514 1584 aa15.63■□□□□ 0.09
CHEK1-218ENST00000544373 KNDC1Q76NI1 1749 aa15.62■□□□□ 0.09
CHEK1-218ENST00000544373 POGKQ9P215 609 aa15.62■□□□□ 0.09
CHEK1-218ENST00000544373 NPHP3Q7Z494 1330 aa15.61■□□□□ 0.09
CHEK1-218ENST00000544373 LAMC1P11047 1609 aa15.61■□□□□ 0.09
CHEK1-218ENST00000544373 ADAMTS2O95450 1211 aa15.6■□□□□ 0.09
CHEK1-218ENST00000544373 ZNF772Q68DY9 489 aaPredicted RBP15.6■□□□□ 0.09
CHEK1-218ENST00000544373 C8orf37Q96NL8 207 aa15.6■□□□□ 0.09
CHEK1-218ENST00000544373 STAC3Q96MF2 364 aa15.6■□□□□ 0.09
CHEK1-218ENST00000544373 HIRIP3Q9BW71 556 aaPredicted RBP15.6■□□□□ 0.09
CHEK1-218ENST00000544373 AFF2P51816 1311 aa15.59■□□□□ 0.09
CHEK1-218ENST00000544373 PXDNQ92626 1479 aa15.59■□□□□ 0.09
CHEK1-218ENST00000544373 DLC1Q96QB1 1528 aa15.58■□□□□ 0.08
CHEK1-218ENST00000544373 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
CHEK1-218ENST00000544373 SIN3AQ96ST3 1273 aa15.56■□□□□ 0.08
CHEK1-218ENST00000544373 PHF8Q9UPP1 1060 aa15.56■□□□□ 0.08
CHEK1-218ENST00000544373 FMN2Q9NZ56 1722 aa15.56■□□□□ 0.08
CHEK1-218ENST00000544373 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
CHEK1-218ENST00000544373 NBPF1Q3BBV0 1214 aa15.55■□□□□ 0.08
CHEK1-218ENST00000544373 KRT28Q7Z3Y7 464 aa15.55■□□□□ 0.08
CHEK1-218ENST00000544373 NGLY1Q96IV0 654 aa15.55■□□□□ 0.08
CHEK1-218ENST00000544373 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
CHEK1-218ENST00000544373 RXRBP28702 533 aa15.54■□□□□ 0.08
CHEK1-218ENST00000544373 SPATA31A3Q5VYP0 1347 aa15.53■□□□□ 0.08
CHEK1-218ENST00000544373 PRR36Q9H6K5 1346 aa15.53■□□□□ 0.08
CHEK1-218ENST00000544373 QTRT2Q9H974 415 aaKnown RBP15.53■□□□□ 0.08
CHEK1-218ENST00000544373 WASLO00401 505 aaPredicted RBP15.52■□□□□ 0.08
CHEK1-218ENST00000544373 L3MBTL2Q969R5 705 aa15.52■□□□□ 0.08
CHEK1-218ENST00000544373 NEUROD1Q13562 356 aa15.51■□□□□ 0.07
CHEK1-218ENST00000544373 PLEKHG5O94827 1062 aa15.5■□□□□ 0.07
CHEK1-218ENST00000544373 PSME1Q06323 249 aa15.5■□□□□ 0.07
CHEK1-218ENST00000544373 ANKARQ7Z5J8 1434 aa15.49■□□□□ 0.07
CHEK1-218ENST00000544373 USP32Q8NFA0 1604 aa15.49■□□□□ 0.07
CHEK1-218ENST00000544373 FNBP4Q8N3X1 1017 aaPredicted RBP15.49■□□□□ 0.07
CHEK1-218ENST00000544373 CABLES1Q8TDN4 633 aa15.49■□□□□ 0.07
CHEK1-218ENST00000544373 USP21Q9UK80 565 aa15.49■□□□□ 0.07
CHEK1-218ENST00000544373 COL22A1Q8NFW1 1626 aaPredicted RBP15.49■□□□□ 0.07
CHEK1-218ENST00000544373 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
CHEK1-218ENST00000544373 RGPD8O14715 1765 aaPredicted RBP15.48■□□□□ 0.07
CHEK1-218ENST00000544373 KIF1AQ12756 1690 aa15.47■□□□□ 0.07
CHEK1-218ENST00000544373 RBM6P78332 1123 aaKnown RBP15.47■□□□□ 0.07
CHEK1-218ENST00000544373 LMOD2Q6P5Q4 547 aa15.47■□□□□ 0.07
CHEK1-218ENST00000544373 TNS3Q68CZ2 1445 aa15.46■□□□□ 0.07
CHEK1-218ENST00000544373 CDK19Q9BWU1 502 aa15.46■□□□□ 0.07
CHEK1-218ENST00000544373 NUDT16Q96DE0 195 aaKnown RBP15.45■□□□□ 0.06
CHEK1-218ENST00000544373 SBNO1A3KN83 1393 aa15.45■□□□□ 0.06
CHEK1-218ENST00000544373 TULP4Q9NRJ4 1543 aa15.45■□□□□ 0.06
CHEK1-218ENST00000544373 BCL9LQ86UU0 1499 aa15.44■□□□□ 0.06
CHEK1-218ENST00000544373 ARHGEF28Q8N1W1 1705 aaKnown RBP15.44■□□□□ 0.06
CHEK1-218ENST00000544373 TRPC5Q9UL62 973 aaPredicted RBP15.44■□□□□ 0.06
CHEK1-218ENST00000544373 RGS12O14924 1447 aa15.43■□□□□ 0.06
CHEK1-218ENST00000544373 CDK12Q9NYV4 1490 aaPredicted RBP15.43■□□□□ 0.06
CHEK1-218ENST00000544373 EIF3AQ14152 1382 aaKnown RBP15.43■□□□□ 0.06
CHEK1-218ENST00000544373 NGDNQ8NEJ9 315 aaKnown RBP15.43■□□□□ 0.06
CHEK1-218ENST00000544373 UPF1Q92900 1129 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHEK1-218ENST00000544373 ATRNO75882 1429 aa15.42■□□□□ 0.06
CHEK1-218ENST00000544373 ATP7BP35670 1465 aa15.42■□□□□ 0.06
CHEK1-218ENST00000544373 TRIM26Q12899 539 aaPredicted RBP15.41■□□□□ 0.06
CHEK1-218ENST00000544373 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
CHEK1-218ENST00000544373 GPRASP1Q5JY77 1395 aa15.41■□□□□ 0.06
CHEK1-218ENST00000544373 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
CHEK1-218ENST00000544373 CENPJQ9HC77 1338 aaPredicted RBP15.4■□□□□ 0.06
CHEK1-218ENST00000544373 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
CHEK1-218ENST00000544373 NBPF8Q3BBV2 869 aa15.4■□□□□ 0.06
CHEK1-218ENST00000544373 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
CHEK1-218ENST00000544373 UNC5CLQ8IV45 518 aa15.39■□□□□ 0.05
CHEK1-218ENST00000544373 CCDC61Q9Y6R9 512 aa15.39■□□□□ 0.05
CHEK1-218ENST00000544373 FAM83GA6ND36 823 aa15.38■□□□□ 0.05
CHEK1-218ENST00000544373 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
CHEK1-218ENST00000544373 SLIT2O94813 1529 aa15.38■□□□□ 0.05
CHEK1-218ENST00000544373 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
CHEK1-218ENST00000544373 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
CHEK1-218ENST00000544373 SRPK2P78362 688 aaKnown RBP15.37■□□□□ 0.05
CHEK1-218ENST00000544373 ACEP12821 1306 aa15.37■□□□□ 0.05
CHEK1-218ENST00000544373 TRPM3Q9HCF6 1732 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms