RNA–Protein interactions for RNA: ENST00000544041.5

MAP3K4-215, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-215ENST00000544041 CHMP3Q9Y3E7 222 aa16.58■□□□□ 0.24
MAP3K4-215ENST00000544041 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.58■□□□□ 0.24
MAP3K4-215ENST00000544041 PLEKHH2Q8IVE3 1493 aa16.58■□□□□ 0.24
MAP3K4-215ENST00000544041 EXOSC9Q06265 439 aaKnown RBP16.58■□□□□ 0.24
MAP3K4-215ENST00000544041 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
MAP3K4-215ENST00000544041 NCOA1Q15788 1441 aa16.57■□□□□ 0.24
MAP3K4-215ENST00000544041 TULP1O00294 542 aaPredicted RBP16.57■□□□□ 0.24
MAP3K4-215ENST00000544041 RBM10P98175 930 aaKnown RBP16.57■□□□□ 0.24
MAP3K4-215ENST00000544041 NOC3LQ8WTT2 800 aaKnown RBP16.57■□□□□ 0.24
MAP3K4-215ENST00000544041 A0A0U1RQG5 324 aaPredicted RBP16.57■□□□□ 0.24
MAP3K4-215ENST00000544041 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
MAP3K4-215ENST00000544041 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
MAP3K4-215ENST00000544041 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
MAP3K4-215ENST00000544041 TPM1P09493 284 aa16.56■□□□□ 0.24
MAP3K4-215ENST00000544041 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
MAP3K4-215ENST00000544041 NEK4P51957 841 aa16.56■□□□□ 0.24
MAP3K4-215ENST00000544041 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
MAP3K4-215ENST00000544041 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
MAP3K4-215ENST00000544041 CCDC66A2RUB6 948 aa16.55■□□□□ 0.24
MAP3K4-215ENST00000544041 CCDC73Q6ZRK6 1079 aa16.55■□□□□ 0.24
MAP3K4-215ENST00000544041 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.55■□□□□ 0.24
MAP3K4-215ENST00000544041 ERBINQ96RT1 1412 aa16.55■□□□□ 0.24
MAP3K4-215ENST00000544041 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
MAP3K4-215ENST00000544041 FKBP5Q13451 457 aaPredicted RBP16.54■□□□□ 0.24
MAP3K4-215ENST00000544041 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
MAP3K4-215ENST00000544041 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
MAP3K4-215ENST00000544041 ERC2O15083 957 aa16.53■□□□□ 0.24
MAP3K4-215ENST00000544041 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
MAP3K4-215ENST00000544041 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
MAP3K4-215ENST00000544041 MNS1Q8NEH6 495 aa16.53■□□□□ 0.24
MAP3K4-215ENST00000544041 UQCRHLA0A096LP55 91 aa16.52■□□□□ 0.24
MAP3K4-215ENST00000544041 UQCRHP07919 91 aa16.52■□□□□ 0.24
MAP3K4-215ENST00000544041 DAPK1P53355 1430 aa16.52■□□□□ 0.23
MAP3K4-215ENST00000544041 LRRFIP1Q32MZ4 808 aaKnown RBP16.52■□□□□ 0.23
MAP3K4-215ENST00000544041 CCDC70Q6NSX1 233 aa16.52■□□□□ 0.23
MAP3K4-215ENST00000544041 GGNBP2Q9H3C7 697 aa16.52■□□□□ 0.23
MAP3K4-215ENST00000544041 TPD52L1Q16890 204 aaPredicted RBP16.52■□□□□ 0.23
MAP3K4-215ENST00000544041 RASSF8Q8NHQ8 419 aa16.52■□□□□ 0.23
MAP3K4-215ENST00000544041 NOB1Q9ULX3 412 aaKnown RBP16.52■□□□□ 0.23
MAP3K4-215ENST00000544041 ANKRD30BQ9BXX2 1392 aa16.51■□□□□ 0.23
MAP3K4-215ENST00000544041 C9orf78Q9NZ63 289 aaPredicted RBP16.51■□□□□ 0.23
MAP3K4-215ENST00000544041 CHD1LQ86WJ1 897 aa16.51■□□□□ 0.23
MAP3K4-215ENST00000544041 CREBRFQ8IUR6 639 aa16.51■□□□□ 0.23
MAP3K4-215ENST00000544041 SUPT6HQ7KZ85 1726 aaKnown RBP16.51■□□□□ 0.23
MAP3K4-215ENST00000544041 TRIM5Q9C035 493 aa16.5■□□□□ 0.23
MAP3K4-215ENST00000544041 NPHP1O15259 732 aa16.5■□□□□ 0.23
MAP3K4-215ENST00000544041 NAT10Q9H0A0 1025 aaKnown RBP16.5■□□□□ 0.23
MAP3K4-215ENST00000544041 PDCP20941 246 aa16.49■□□□□ 0.23
MAP3K4-215ENST00000544041 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
MAP3K4-215ENST00000544041 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
MAP3K4-215ENST00000544041 HOOK1Q9UJC3 728 aaKnown RBP16.49■□□□□ 0.23
MAP3K4-215ENST00000544041 GNAI3P08754 354 aa16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 HMOX1P09601 288 aa16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 C9orf84Q5VXU9 1444 aa16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 TEFQ10587 303 aa16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 CFAP70Q5T0N1 1121 aa16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 PSMA5P28066 241 aa16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
MAP3K4-215ENST00000544041 CPLX1O14810 134 aa16.47■□□□□ 0.23
MAP3K4-215ENST00000544041 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
MAP3K4-215ENST00000544041 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
MAP3K4-215ENST00000544041 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.235e-7■■■■■ 44.5
MAP3K4-215ENST00000544041 NOM1Q5C9Z4 860 aaKnown RBP16.47■□□□□ 0.23
MAP3K4-215ENST00000544041 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
MAP3K4-215ENST00000544041 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
MAP3K4-215ENST00000544041 ACBD3Q9H3P7 528 aa16.47■□□□□ 0.23
MAP3K4-215ENST00000544041 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
MAP3K4-215ENST00000544041 G3BP1Q13283 466 aaKnown RBP eCLIP16.46■□□□□ 0.23
MAP3K4-215ENST00000544041 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
MAP3K4-215ENST00000544041 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.23
MAP3K4-215ENST00000544041 TWISTNBQ3B726 338 aaPredicted RBP16.46■□□□□ 0.23
MAP3K4-215ENST00000544041 TOMM22Q9NS69 142 aa16.46■□□□□ 0.23
MAP3K4-215ENST00000544041 IPO7O95373 1038 aaKnown RBP16.46■□□□□ 0.22
MAP3K4-215ENST00000544041 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.22
MAP3K4-215ENST00000544041 CCDC192P0DO97 292 aa16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 TRIM29Q14134 588 aa16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 SKAP1Q86WV1 359 aa16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 NKTRP30414 1462 aaKnown RBP16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 ANKRD20A12PQ8NF67 263 aa16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 PES1O00541 588 aaKnown RBP16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 FIBPO43427 364 aa16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 PDCL3Q9H2J4 239 aa16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
MAP3K4-215ENST00000544041 EIF2S2P20042 333 aaKnown RBP16.44■□□□□ 0.22
MAP3K4-215ENST00000544041 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
MAP3K4-215ENST00000544041 CWC15Q9P013 229 aaKnown RBP16.44■□□□□ 0.22
MAP3K4-215ENST00000544041 TROQ12816 1431 aaPredicted RBP16.44■□□□□ 0.22
MAP3K4-215ENST00000544041 HSP90B2PQ58FF3 399 aa16.44■□□□□ 0.22
MAP3K4-215ENST00000544041 SYNE3Q6ZMZ3 975 aa16.44■□□□□ 0.22
MAP3K4-215ENST00000544041 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
MAP3K4-215ENST00000544041 CABP2Q9NPB3 220 aa16.43■□□□□ 0.22
MAP3K4-215ENST00000544041 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
MAP3K4-215ENST00000544041 SDF4Q9BRK5 362 aa16.43■□□□□ 0.22
MAP3K4-215ENST00000544041 NUTM2FA1L443 756 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms