RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 IFNL1Q8IU54 200 aa7.85□□□□□ -1.15
NPIPB4-219ENST00000543660 CAMSAP2Q08AD1 1489 aa7.85□□□□□ -1.15
NPIPB4-219ENST00000543660 CFAP65Q6ZU64 1925 aaKnown RBP7.85□□□□□ -1.15
NPIPB4-219ENST00000543660 TET3O43151 1660 aa7.85□□□□□ -1.15
NPIPB4-219ENST00000543660 CEP162Q5TB80 1403 aa7.85□□□□□ -1.15
NPIPB4-219ENST00000543660 FGD6Q6ZV73 1430 aa7.85□□□□□ -1.15
NPIPB4-219ENST00000543660 MSH6P52701 1360 aa7.84□□□□□ -1.15
NPIPB4-219ENST00000543660 TSPY4P0CV99 314 aa7.84□□□□□ -1.15
NPIPB4-219ENST00000543660 TSPY10P0CW01 314 aa7.84□□□□□ -1.15
NPIPB4-219ENST00000543660 FAM212AQ96EL1 285 aa7.84□□□□□ -1.15
NPIPB4-219ENST00000543660 ARXQ96QS3 562 aa7.84□□□□□ -1.15
NPIPB4-219ENST00000543660 TMEM106CQ9BVX2 250 aa7.84□□□□□ -1.15
NPIPB4-219ENST00000543660 MROH1Q8NDA8 1641 aa7.84□□□□□ -1.15
NPIPB4-219ENST00000543660 NKTRP30414 1462 aaKnown RBP7.83□□□□□ -1.16
NPIPB4-219ENST00000543660 PRKCSHP14314 528 aaPredicted RBP7.83□□□□□ -1.16
NPIPB4-219ENST00000543660 TMEM121BQ9BXQ6 578 aaPredicted RBP7.83□□□□□ -1.16
NPIPB4-219ENST00000543660 ARHGAP31Q2M1Z3 1444 aa7.83□□□□□ -1.16
NPIPB4-219ENST00000543660 IRX5P78411 483 aaPredicted RBP7.82□□□□□ -1.16
NPIPB4-219ENST00000543660 NWD1Q149M9 1564 aa7.82□□□□□ -1.16
NPIPB4-219ENST00000543660 AFF2P51816 1311 aa7.81□□□□□ -1.16
NPIPB4-219ENST00000543660 ARHGEF5Q12774 1597 aa7.81□□□□□ -1.16
NPIPB4-219ENST00000543660 RGS12O14924 1447 aa7.81□□□□□ -1.16
NPIPB4-219ENST00000543660 IDI1Q13907 227 aa7.81□□□□□ -1.16
NPIPB4-219ENST00000543660 EHBP1L1Q8N3D4 1523 aa7.81□□□□□ -1.16
NPIPB4-219ENST00000543660 PIK3C2BO00750 1634 aa7.81□□□□□ -1.16
NPIPB4-219ENST00000543660 CEP152O94986 1710 aa7.81□□□□□ -1.16
NPIPB4-219ENST00000543660 EFCAB6Q5THR3 1501 aa7.8□□□□□ -1.16
NPIPB4-219ENST00000543660 SNPHO15079 494 aa7.8□□□□□ -1.16
NPIPB4-219ENST00000543660 ERICH6Q7L0X2 663 aa7.8□□□□□ -1.16
NPIPB4-219ENST00000543660 OCEL1Q9H607 264 aa7.8□□□□□ -1.16
NPIPB4-219ENST00000543660 AHDC1Q5TGY3 1603 aaPredicted RBP7.8□□□□□ -1.16
NPIPB4-219ENST00000543660 EIF2AK4Q9P2K8 1649 aaKnown RBP7.8□□□□□ -1.16
NPIPB4-219ENST00000543660 SHPRHQ149N8 1683 aa7.79□□□□□ -1.16
NPIPB4-219ENST00000543660 EP400Q96L91 3159 aa7.79□□□□□ -1.16
NPIPB4-219ENST00000543660 NUTM2BA6NNL0 878 aaPredicted RBP7.79□□□□□ -1.16
NPIPB4-219ENST00000543660 NUTM2EB1AL46 878 aaPredicted RBP7.79□□□□□ -1.16
NPIPB4-219ENST00000543660 RBM6P78332 1123 aaKnown RBP7.79□□□□□ -1.16
NPIPB4-219ENST00000543660 NUTM2AQ8IVF1 878 aaPredicted RBP7.79□□□□□ -1.16
NPIPB4-219ENST00000543660 NCOA3Q9Y6Q9 1424 aa7.78□□□□□ -1.16
NPIPB4-219ENST00000543660 QTRT2Q9H974 415 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-219ENST00000543660 DIP2AQ14689 1571 aa7.78□□□□□ -1.16
NPIPB4-219ENST00000543660 MAST1Q9Y2H9 1570 aa7.78□□□□□ -1.16
NPIPB4-219ENST00000543660 KDM5AP29375 1690 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-219ENST00000543660 SETBP1Q9Y6X0 1596 aa7.77□□□□□ -1.17
NPIPB4-219ENST00000543660 NUTM2DQ5VT03 806 aaPredicted RBP7.77□□□□□ -1.17
NPIPB4-219ENST00000543660 BRINP3Q76B58 766 aa7.77□□□□□ -1.17
NPIPB4-219ENST00000543660 CADPS2Q86UW7 1296 aa7.77□□□□□ -1.17
NPIPB4-219ENST00000543660 C19orf44Q9H6X5 657 aa7.77□□□□□ -1.17
NPIPB4-219ENST00000543660 CHD2O14647 1828 aaKnown RBP7.76□□□□□ -1.17
NPIPB4-219ENST00000543660 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.76□□□□□ -1.17
NPIPB4-219ENST00000543660 ATAD2Q6PL18 1390 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 PLEKHG1Q9ULL1 1385 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 DUOX2Q9NRD8 1548 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 ATF3P18847 181 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 MMRN1Q13201 1228 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 VSIG10Q8N0Z9 540 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 C8orf37Q96NL8 207 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 TBX22Q9Y458 520 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 SETD5Q9C0A6 1442 aa7.75□□□□□ -1.17
NPIPB4-219ENST00000543660 TPRNQ4KMQ1 711 aa7.74□□□□□ -1.17
NPIPB4-219ENST00000543660 C14orf37Q86TY3 774 aa7.74□□□□□ -1.17
NPIPB4-219ENST00000543660 SPNS2Q8IVW8 549 aa7.74□□□□□ -1.17
NPIPB4-219ENST00000543660 ZFYVE9O95405 1425 aa7.74□□□□□ -1.17
NPIPB4-219ENST00000543660 NOS1P29475 1434 aa7.74□□□□□ -1.17
NPIPB4-219ENST00000543660 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.74□□□□□ -1.17
NPIPB4-219ENST00000543660 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
NPIPB4-219ENST00000543660 ERBINQ96RT1 1412 aa7.73□□□□□ -1.17
NPIPB4-219ENST00000543660 LRRC59Q96AG4 307 aaKnown RBP7.73□□□□□ -1.17
NPIPB4-219ENST00000543660 NGLY1Q96IV0 654 aa7.73□□□□□ -1.17
NPIPB4-219ENST00000543660 SLC52A1Q9NWF4 448 aa7.73□□□□□ -1.17
NPIPB4-219ENST00000543660 LMTK2Q8IWU2 1503 aa7.73□□□□□ -1.17
NPIPB4-219ENST00000543660 KIF15Q9NS87 1388 aa7.72□□□□□ -1.17
NPIPB4-219ENST00000543660 RRP7BPQ9NSQ0 103 aa7.72□□□□□ -1.17
NPIPB4-219ENST00000543660 ASXL1Q8IXJ9 1541 aa7.72□□□□□ -1.17
NPIPB4-219ENST00000543660 PNPLA6Q8IY17 1366 aa7.71□□□□□ -1.17
NPIPB4-219ENST00000543660 ADAMTS13Q76LX8 1427 aa7.71□□□□□ -1.17
NPIPB4-219ENST00000543660 CCDC125Q86Z20 511 aa7.71□□□□□ -1.18
NPIPB4-219ENST00000543660 KANK1Q14678 1352 aa7.71□□□□□ -1.18
NPIPB4-219ENST00000543660 RIMS2Q9UQ26 1411 aa7.7□□□□□ -1.18
NPIPB4-219ENST00000543660 PPP1R15AO75807 674 aaPredicted RBP7.7□□□□□ -1.18
NPIPB4-219ENST00000543660 ADAMTS2O95450 1211 aa7.7□□□□□ -1.18
NPIPB4-219ENST00000543660 HDGFP51858 240 aaKnown RBP7.7□□□□□ -1.18
NPIPB4-219ENST00000543660 DCAF8Q5TAQ9 597 aa7.7□□□□□ -1.18
NPIPB4-219ENST00000543660 DDX17Q92841 729 aaKnown RBP7.7□□□□□ -1.18
NPIPB4-219ENST00000543660 PIK3R4Q99570 1358 aa7.7□□□□□ -1.18
NPIPB4-219ENST00000543660 DCCP43146 1447 aa7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 MST1RQ04912 1400 aa7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 MYOM3Q5VTT5 1437 aa7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 FNBP4Q8N3X1 1017 aaPredicted RBP7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 USP21Q9UK80 565 aa7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 TRPC5Q9UL62 973 aaPredicted RBP7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 AMOTL2Q9Y2J4 779 aa7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 LRP5O75197 1615 aa7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 NHSL1Q5SYE7 1610 aa7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 PTPRUQ92729 1446 aa7.69□□□□□ -1.18
NPIPB4-219ENST00000543660 PYGBP11216 843 aa7.68□□□□□ -1.18
NPIPB4-219ENST00000543660 IFFO2Q5TF58 517 aa7.68□□□□□ -1.18
NPIPB4-219ENST00000543660 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.68□□□□□ -1.18
NPIPB4-219ENST00000543660 ABCC5O15440 1437 aa7.68□□□□□ -1.18
NPIPB4-219ENST00000543660 ATRNO75882 1429 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms