RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.28
SCNN1A-220ENST00000543585 KIAA1210Q9ULL0 1709 aa23.07■■□□□ 1.28
SCNN1A-220ENST00000543585 ARHGEF28Q8N1W1 1705 aaKnown RBP23.05■■□□□ 1.28
SCNN1A-220ENST00000543585 DLC1Q96QB1 1528 aa23.05■■□□□ 1.28
SCNN1A-220ENST00000543585 SHPRHQ149N8 1683 aa23.05■■□□□ 1.28
SCNN1A-220ENST00000543585 SIN3AQ96ST3 1273 aa23.03■■□□□ 1.28
SCNN1A-220ENST00000543585 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
SCNN1A-220ENST00000543585 ILDR2Q71H61 639 aa23.01■■□□□ 1.27
SCNN1A-220ENST00000543585 SIRT1Q96EB6 747 aa23.01■■□□□ 1.27
SCNN1A-220ENST00000543585 DDX17Q92841 729 aaKnown RBP23■■□□□ 1.27
SCNN1A-220ENST00000543585 ORAI2Q96SN7 254 aa22.99■■□□□ 1.27
SCNN1A-220ENST00000543585 JCADQ9P266 1359 aa22.98■■□□□ 1.27
SCNN1A-220ENST00000543585 PRAM1Q96QH2 718 aa22.97■■□□□ 1.27
SCNN1A-220ENST00000543585 ADGRB2O60241 1585 aa22.97■■□□□ 1.27
SCNN1A-220ENST00000543585 TRAK1Q9UPV9 953 aa22.96■■□□□ 1.27
SCNN1A-220ENST00000543585 USP32Q8NFA0 1604 aa22.96■■□□□ 1.27
SCNN1A-220ENST00000543585 SAFB2Q14151 953 aaKnown RBP eCLIP22.95■■□□□ 1.26
SCNN1A-220ENST00000543585 LRP6O75581 1613 aa22.94■■□□□ 1.26
SCNN1A-220ENST00000543585 L3MBTL2Q969R5 705 aa22.94■■□□□ 1.26
SCNN1A-220ENST00000543585 TRPM1Q7Z4N2 1603 aa22.93■■□□□ 1.26
SCNN1A-220ENST00000543585 NUTM2FA1L443 756 aa22.93■■□□□ 1.26
SCNN1A-220ENST00000543585 NEUROD1Q13562 356 aa22.92■■□□□ 1.26
SCNN1A-220ENST00000543585 KIF1AQ12756 1690 aa22.91■■□□□ 1.26
SCNN1A-220ENST00000543585 NBPF1Q3BBV0 1214 aa22.91■■□□□ 1.26
SCNN1A-220ENST00000543585 POGKQ9P215 609 aa22.89■■□□□ 1.25
SCNN1A-220ENST00000543585 RGS17Q9UGC6 210 aaPredicted RBP22.89■■□□□ 1.25
SCNN1A-220ENST00000543585 PXDNQ92626 1479 aa22.89■■□□□ 1.25
SCNN1A-220ENST00000543585 ESCO1Q5FWF5 840 aa22.88■■□□□ 1.25
SCNN1A-220ENST00000543585 SOS2Q07890 1332 aaPredicted RBP22.87■■□□□ 1.25
SCNN1A-220ENST00000543585 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
SCNN1A-220ENST00000543585 PNPLA6Q8IY17 1366 aa22.86■■□□□ 1.25
SCNN1A-220ENST00000543585 HIRIP3Q9BW71 556 aaPredicted RBP22.85■■□□□ 1.25
SCNN1A-220ENST00000543585 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
SCNN1A-220ENST00000543585 MINK1Q8N4C8 1332 aaPredicted RBP22.84■■□□□ 1.25
SCNN1A-220ENST00000543585 COL22A1Q8NFW1 1626 aaPredicted RBP22.84■■□□□ 1.25
SCNN1A-220ENST00000543585 LRRC59Q96AG4 307 aaKnown RBP22.83■■□□□ 1.25
SCNN1A-220ENST00000543585 QRICH2Q9H0J4 1663 aa22.83■■□□□ 1.24
SCNN1A-220ENST00000543585 TULP4Q9NRJ4 1543 aa22.82■■□□□ 1.24
SCNN1A-220ENST00000543585 FOXO3O43524 673 aa22.81■■□□□ 1.24
SCNN1A-220ENST00000543585 ANKARQ7Z5J8 1434 aa22.81■■□□□ 1.24
SCNN1A-220ENST00000543585 NPHP3Q7Z494 1330 aa22.81■■□□□ 1.24
SCNN1A-220ENST00000543585 ITSN1Q15811 1721 aa22.8■■□□□ 1.24
SCNN1A-220ENST00000543585 XPCQ01831 940 aaPredicted RBP22.8■■□□□ 1.24
SCNN1A-220ENST00000543585 PRR36Q9H6K5 1346 aa22.8■■□□□ 1.24
SCNN1A-220ENST00000543585 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
SCNN1A-220ENST00000543585 MARF1Q9Y4F3 1742 aaKnown RBP22.79■■□□□ 1.24
SCNN1A-220ENST00000543585 TOPAZ1Q8N9V7 1692 aa22.78■■□□□ 1.24
SCNN1A-220ENST00000543585 TRPM3Q9HCF6 1732 aaPredicted RBP22.78■■□□□ 1.24
SCNN1A-220ENST00000543585 NUTM2BA6NNL0 878 aaPredicted RBP22.77■■□□□ 1.24
SCNN1A-220ENST00000543585 NUTM2EB1AL46 878 aaPredicted RBP22.77■■□□□ 1.24
SCNN1A-220ENST00000543585 WASLO00401 505 aaPredicted RBP22.77■■□□□ 1.24
SCNN1A-220ENST00000543585 NUTM2AQ8IVF1 878 aaPredicted RBP22.77■■□□□ 1.24
SCNN1A-220ENST00000543585 POTEAQ6S8J7 498 aa22.76■■□□□ 1.23
SCNN1A-220ENST00000543585 PHF8Q9UPP1 1060 aa22.76■■□□□ 1.23
SCNN1A-220ENST00000543585 ATP7BP35670 1465 aa22.75■■□□□ 1.23
SCNN1A-220ENST00000543585 ABCA3Q99758 1704 aa22.74■■□□□ 1.23
SCNN1A-220ENST00000543585 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
SCNN1A-220ENST00000543585 PMFBP1Q8TBY8 1022 aa22.72■■□□□ 1.23
SCNN1A-220ENST00000543585 ALS2Q96Q42 1657 aa22.71■■□□□ 1.23
SCNN1A-220ENST00000543585 MEX3CQ5U5Q3 659 aaKnown RBP22.71■■□□□ 1.23
SCNN1A-220ENST00000543585 EIF3AQ14152 1382 aaKnown RBP22.71■■□□□ 1.23
SCNN1A-220ENST00000543585 TONSLQ96HA7 1378 aa22.71■■□□□ 1.23
SCNN1A-220ENST00000543585 KRT28Q7Z3Y7 464 aa22.7■■□□□ 1.22
SCNN1A-220ENST00000543585 CENPJQ9HC77 1338 aaPredicted RBP22.7■■□□□ 1.22
SCNN1A-220ENST00000543585 ROCK2O75116 1388 aaKnown RBP22.7■■□□□ 1.22
SCNN1A-220ENST00000543585 GPRASP1Q5JY77 1395 aa22.7■■□□□ 1.22
SCNN1A-220ENST00000543585 SPATA31A3Q5VYP0 1347 aa22.69■■□□□ 1.22
SCNN1A-220ENST00000543585 CDK19Q9BWU1 502 aa22.69■■□□□ 1.22
SCNN1A-220ENST00000543585 RALGAPBQ86X10 1494 aa22.68■■□□□ 1.22
SCNN1A-220ENST00000543585 TNS3Q68CZ2 1445 aa22.67■■□□□ 1.22
SCNN1A-220ENST00000543585 SOCS7O14512 581 aa22.67■■□□□ 1.22
SCNN1A-220ENST00000543585 CRYBG1Q9Y4K1 1723 aa22.66■■□□□ 1.22
SCNN1A-220ENST00000543585 NUDT16Q96DE0 195 aaKnown RBP22.66■■□□□ 1.22
SCNN1A-220ENST00000543585 SBNO1A3KN83 1393 aa22.64■■□□□ 1.22
SCNN1A-220ENST00000543585 AFF2P51816 1311 aa22.64■■□□□ 1.22
SCNN1A-220ENST00000543585 ADAMTS2O95450 1211 aa22.64■■□□□ 1.21
SCNN1A-220ENST00000543585 C8orf37Q96NL8 207 aa22.63■■□□□ 1.21
SCNN1A-220ENST00000543585 PSME1Q06323 249 aa22.62■■□□□ 1.21
SCNN1A-220ENST00000543585 ZNF772Q68DY9 489 aaPredicted RBP22.59■■□□□ 1.21
SCNN1A-220ENST00000543585 CABP2Q9NPB3 220 aa22.58■■□□□ 1.21
SCNN1A-220ENST00000543585 POLR3AO14802 1390 aaPredicted RBP22.58■■□□□ 1.21
SCNN1A-220ENST00000543585 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.57■■□□□ 1.2
SCNN1A-220ENST00000543585 NGDNQ8NEJ9 315 aaKnown RBP22.57■■□□□ 1.2
SCNN1A-220ENST00000543585 CCDC61Q9Y6R9 512 aa22.57■■□□□ 1.2
SCNN1A-220ENST00000543585 PLCH1Q4KWH8 1693 aa22.57■■□□□ 1.2
SCNN1A-220ENST00000543585 AKAP12Q02952 1782 aa22.57■■□□□ 1.2
SCNN1A-220ENST00000543585 CABLES1Q8TDN4 633 aa22.56■■□□□ 1.2
SCNN1A-220ENST00000543585 CARD11Q9BXL7 1154 aa22.56■■□□□ 1.2
SCNN1A-220ENST00000543585 PPIP5K1Q6PFW1 1433 aa22.56■■□□□ 1.2
SCNN1A-220ENST00000543585 ACEP12821 1306 aa22.56■■□□□ 1.2
SCNN1A-220ENST00000543585 ARHGEF10O15013 1369 aa22.55■■□□□ 1.2
SCNN1A-220ENST00000543585 PLEKHG3A1L390 1219 aa22.55■■□□□ 1.2
SCNN1A-220ENST00000543585 SRPK2P78362 688 aaKnown RBP22.55■■□□□ 1.2
SCNN1A-220ENST00000543585 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
SCNN1A-220ENST00000543585 PHRF1Q9P1Y6 1649 aaKnown RBP22.54■■□□□ 1.2
SCNN1A-220ENST00000543585 PLEKHG5O94827 1062 aa22.53■■□□□ 1.2
SCNN1A-220ENST00000543585 LMOD2Q6P5Q4 547 aa22.53■■□□□ 1.2
SCNN1A-220ENST00000543585 FNBP4Q8N3X1 1017 aaPredicted RBP22.53■■□□□ 1.2
SCNN1A-220ENST00000543585 CLSPNQ9HAW4 1339 aa22.53■■□□□ 1.2
SCNN1A-220ENST00000543585 NWD2Q9ULI1 1742 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms