RNA–Protein interactions for RNA: ENST00000543419.5

ECHDC2-224, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-224ENST00000543419 USP21Q9UK80 565 aa12.8□□□□□ -0.36
ECHDC2-224ENST00000543419 TRPC5Q9UL62 973 aaPredicted RBP12.8□□□□□ -0.36
ECHDC2-224ENST00000543419 ATAD2Q6PL18 1390 aa12.8□□□□□ -0.36
ECHDC2-224ENST00000543419 RRBP1Q9P2E9 1410 aaKnown RBP12.79□□□□□ -0.36
ECHDC2-224ENST00000543419 CDC42BPGQ6DT37 1551 aa12.79□□□□□ -0.36
ECHDC2-224ENST00000543419 RPGRIP1LQ68CZ1 1315 aa12.79□□□□□ -0.36
ECHDC2-224ENST00000543419 PPLO60437 1756 aa12.79□□□□□ -0.36
ECHDC2-224ENST00000543419 TECPR2O15040 1411 aa12.77□□□□□ -0.37
ECHDC2-224ENST00000543419 MARF1Q9Y4F3 1742 aaKnown RBP12.76□□□□□ -0.37
ECHDC2-224ENST00000543419 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
ECHDC2-224ENST00000543419 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
ECHDC2-224ENST00000543419 SLIT2O94813 1529 aa12.74□□□□□ -0.37
ECHDC2-224ENST00000543419 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
ECHDC2-224ENST00000543419 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
ECHDC2-224ENST00000543419 CCDC125Q86Z20 511 aa12.73□□□□□ -0.37
ECHDC2-224ENST00000543419 GJD4Q96KN9 370 aaPredicted RBP12.73□□□□□ -0.37
ECHDC2-224ENST00000543419 GLI3P10071 1580 aa12.73□□□□□ -0.37
ECHDC2-224ENST00000543419 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
ECHDC2-224ENST00000543419 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
ECHDC2-224ENST00000543419 FOXO3O43524 673 aa12.72□□□□□ -0.37
ECHDC2-224ENST00000543419 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
ECHDC2-224ENST00000543419 LRPPRCP42704 1394 aaKnown RBP12.71□□□□□ -0.37
ECHDC2-224ENST00000543419 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
ECHDC2-224ENST00000543419 XPCQ01831 940 aaPredicted RBP12.7□□□□□ -0.38
ECHDC2-224ENST00000543419 WAPLQ7Z5K2 1190 aa12.7□□□□□ -0.38
ECHDC2-224ENST00000543419 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
ECHDC2-224ENST00000543419 KNDC1Q76NI1 1749 aa12.7□□□□□ -0.38
ECHDC2-224ENST00000543419 IFT172Q9UG01 1749 aa12.7□□□□□ -0.38
ECHDC2-224ENST00000543419 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
ECHDC2-224ENST00000543419 SPATA31A3Q5VYP0 1347 aa12.69□□□□□ -0.38
ECHDC2-224ENST00000543419 PIK3C2GO75747 1445 aa12.69□□□□□ -0.38
ECHDC2-224ENST00000543419 FMN2Q9NZ56 1722 aa12.68□□□□□ -0.38
ECHDC2-224ENST00000543419 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
ECHDC2-224ENST00000543419 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
ECHDC2-224ENST00000543419 USP32Q8NFA0 1604 aa12.67□□□□□ -0.38
ECHDC2-224ENST00000543419 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
ECHDC2-224ENST00000543419 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
ECHDC2-224ENST00000543419 BLMP54132 1417 aaPredicted RBP12.67□□□□□ -0.38
ECHDC2-224ENST00000543419 ANKRD30BQ9BXX2 1392 aa12.67□□□□□ -0.38
ECHDC2-224ENST00000543419 FOXD1Q16676 465 aa12.66□□□□□ -0.38
ECHDC2-224ENST00000543419 BRWD3Q6RI45 1802 aa12.66□□□□□ -0.38
ECHDC2-224ENST00000543419 KIF1AQ12756 1690 aa12.66□□□□□ -0.38
ECHDC2-224ENST00000543419 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.38
ECHDC2-224ENST00000543419 TMEM132EQ6IEE7 984 aa12.65□□□□□ -0.38
ECHDC2-224ENST00000543419 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.38
ECHDC2-224ENST00000543419 YTHDC2Q9H6S0 1430 aaKnown RBP12.64□□□□□ -0.39
ECHDC2-224ENST00000543419 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
ECHDC2-224ENST00000543419 STK26Q9P289 416 aa12.64□□□□□ -0.39
ECHDC2-224ENST00000543419 VPS72Q15906 364 aa12.63□□□□□ -0.39
ECHDC2-224ENST00000543419 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
ECHDC2-224ENST00000543419 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
ECHDC2-224ENST00000543419 NWD2Q9ULI1 1742 aa12.62□□□□□ -0.39
ECHDC2-224ENST00000543419 RGPD8O14715 1765 aaPredicted RBP12.62□□□□□ -0.39
ECHDC2-224ENST00000543419 SBNO1A3KN83 1393 aa12.62□□□□□ -0.39
ECHDC2-224ENST00000543419 KRT28Q7Z3Y7 464 aa12.62□□□□□ -0.39
ECHDC2-224ENST00000543419 DEFB132Q7Z7B7 95 aa12.62□□□□□ -0.39
ECHDC2-224ENST00000543419 C14orf93Q9H972 538 aaKnown RBP12.62□□□□□ -0.39
ECHDC2-224ENST00000543419 RGL3Q3MIN7 710 aa12.61□□□□□ -0.39
ECHDC2-224ENST00000543419 SEPT12Q8IYM1 358 aa12.61□□□□□ -0.39
ECHDC2-224ENST00000543419 LRP5O75197 1615 aa12.61□□□□□ -0.39
ECHDC2-224ENST00000543419 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
ECHDC2-224ENST00000543419 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
ECHDC2-224ENST00000543419 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
ECHDC2-224ENST00000543419 MPHOSPH9Q99550 1183 aa12.59□□□□□ -0.39
ECHDC2-224ENST00000543419 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
ECHDC2-224ENST00000543419 NRAPQ86VF7 1730 aa12.58□□□□□ -0.4
ECHDC2-224ENST00000543419 DLC1Q96QB1 1528 aa12.57□□□□□ -0.4
ECHDC2-224ENST00000543419 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
ECHDC2-224ENST00000543419 ADGRB2O60241 1585 aa12.57□□□□□ -0.4
ECHDC2-224ENST00000543419 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
ECHDC2-224ENST00000543419 ANKARQ7Z5J8 1434 aa12.56□□□□□ -0.4
ECHDC2-224ENST00000543419 PSME1Q06323 249 aa12.56□□□□□ -0.4
ECHDC2-224ENST00000543419 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
ECHDC2-224ENST00000543419 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
ECHDC2-224ENST00000543419 ADGRB1O14514 1584 aa12.56□□□□□ -0.4
ECHDC2-224ENST00000543419 ALS2Q96Q42 1657 aa12.55□□□□□ -0.4
ECHDC2-224ENST00000543419 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
ECHDC2-224ENST00000543419 PRAM1Q96QH2 718 aa12.54□□□□□ -0.4
ECHDC2-224ENST00000543419 DHX57Q6P158 1386 aaKnown RBP12.54□□□□□ -0.4
ECHDC2-224ENST00000543419 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
ECHDC2-224ENST00000543419 PRR36Q9H6K5 1346 aa12.53□□□□□ -0.4
ECHDC2-224ENST00000543419 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.4
ECHDC2-224ENST00000543419 HRCP23327 699 aa12.52□□□□□ -0.41
ECHDC2-224ENST00000543419 COL14A1Q05707 1796 aaKnown RBP12.51□□□□□ -0.41
ECHDC2-224ENST00000543419 PMFBP1Q8TBY8 1022 aa12.51□□□□□ -0.41
ECHDC2-224ENST00000543419 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
ECHDC2-224ENST00000543419 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
ECHDC2-224ENST00000543419 SF3B2Q13435 895 aaKnown RBP12.5□□□□□ -0.41
ECHDC2-224ENST00000543419 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
ECHDC2-224ENST00000543419 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
ECHDC2-224ENST00000543419 ACIN1Q9UKV3 1341 aaKnown RBP12.5□□□□□ -0.41
ECHDC2-224ENST00000543419 TNS1Q9HBL0 1735 aaKnown RBP12.49□□□□□ -0.41
ECHDC2-224ENST00000543419 TULP4Q9NRJ4 1543 aa12.49□□□□□ -0.41
ECHDC2-224ENST00000543419 BAG6P46379 1132 aa12.49□□□□□ -0.41
ECHDC2-224ENST00000543419 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
ECHDC2-224ENST00000543419 SAFB2Q14151 953 aaKnown RBP eCLIP12.49□□□□□ -0.41
ECHDC2-224ENST00000543419 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
ECHDC2-224ENST00000543419 PSDA5PKW4 1024 aaPredicted RBP12.48□□□□□ -0.41
ECHDC2-224ENST00000543419 CCDC9Q9Y3X0 531 aaKnown RBP12.48□□□□□ -0.41
ECHDC2-224ENST00000543419 EN1Q05925 392 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms