RNA–Protein interactions for RNA: ENST00000543187.5

C1S-220, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-220ENST00000543187 ACIN1Q9UKV3 1341 aaKnown RBP23.43■■□□□ 1.34
C1S-220ENST00000543187 ADAMTS2O95450 1211 aa23.42■■□□□ 1.34
C1S-220ENST00000543187 ESCO1Q5FWF5 840 aa23.42■■□□□ 1.34
C1S-220ENST00000543187 LRPPRCP42704 1394 aaKnown RBP23.41■■□□□ 1.34
C1S-220ENST00000543187 TMEM132EQ6IEE7 984 aa23.41■■□□□ 1.34
C1S-220ENST00000543187 WAPLQ7Z5K2 1190 aa23.41■■□□□ 1.34
C1S-220ENST00000543187 CDK12Q9NYV4 1490 aaPredicted RBP23.41■■□□□ 1.34
C1S-220ENST00000543187 TECPR2O15040 1411 aa23.41■■□□□ 1.34
C1S-220ENST00000543187 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
C1S-220ENST00000543187 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
C1S-220ENST00000543187 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
C1S-220ENST00000543187 PIK3C2GO75747 1445 aa23.4■■□□□ 1.34
C1S-220ENST00000543187 KNDC1Q76NI1 1749 aa23.39■■□□□ 1.34
C1S-220ENST00000543187 ABCC11Q96J66 1382 aa23.39■■□□□ 1.33
C1S-220ENST00000543187 NPHP3Q7Z494 1330 aa23.38■■□□□ 1.33
C1S-220ENST00000543187 RBM6P78332 1123 aaKnown RBP23.37■■□□□ 1.33
C1S-220ENST00000543187 NUTM2FA1L443 756 aa23.36■■□□□ 1.33
C1S-220ENST00000543187 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
C1S-220ENST00000543187 COL22A1Q8NFW1 1626 aaPredicted RBP23.35■■□□□ 1.33
C1S-220ENST00000543187 FOXO3O43524 673 aa23.35■■□□□ 1.33
C1S-220ENST00000543187 YTHDC2Q9H6S0 1430 aaKnown RBP23.34■■□□□ 1.33
C1S-220ENST00000543187 C14orf93Q9H972 538 aaKnown RBP23.33■■□□□ 1.33
C1S-220ENST00000543187 PXDNQ92626 1479 aa23.32■■□□□ 1.32
C1S-220ENST00000543187 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
C1S-220ENST00000543187 USP21Q9UK80 565 aa23.32■■□□□ 1.32
C1S-220ENST00000543187 RGS12O14924 1447 aa23.32■■□□□ 1.32
C1S-220ENST00000543187 FMN2Q9NZ56 1722 aa23.31■■□□□ 1.32
C1S-220ENST00000543187 RAB3GAP2Q9H2M9 1393 aa23.3■■□□□ 1.32
C1S-220ENST00000543187 SIRT1Q96EB6 747 aa23.3■■□□□ 1.32
C1S-220ENST00000543187 CFAP70Q5T0N1 1121 aa23.29■■□□□ 1.32
C1S-220ENST00000543187 FNBP4Q8N3X1 1017 aaPredicted RBP23.29■■□□□ 1.32
C1S-220ENST00000543187 MYOM2P54296 1465 aa23.29■■□□□ 1.32
C1S-220ENST00000543187 NRXN1Q9ULB1 1477 aa23.29■■□□□ 1.32
C1S-220ENST00000543187 DHX57Q6P158 1386 aaKnown RBP23.28■■□□□ 1.32
C1S-220ENST00000543187 TRPC5Q9UL62 973 aaPredicted RBP23.28■■□□□ 1.32
C1S-220ENST00000543187 MARF1Q9Y4F3 1742 aaKnown RBP23.28■■□□□ 1.32
C1S-220ENST00000543187 RGPD8O14715 1765 aaPredicted RBP23.27■■□□□ 1.32
C1S-220ENST00000543187 KIF1AQ12756 1690 aa23.26■■□□□ 1.31
C1S-220ENST00000543187 ATRNO75882 1429 aa23.22■■□□□ 1.31
C1S-220ENST00000543187 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
C1S-220ENST00000543187 KRT28Q7Z3Y7 464 aa23.21■■□□□ 1.31
C1S-220ENST00000543187 PRAM1Q96QH2 718 aa23.21■■□□□ 1.31
C1S-220ENST00000543187 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
C1S-220ENST00000543187 PHF8Q9UPP1 1060 aa23.19■■□□□ 1.3
C1S-220ENST00000543187 BCL9LQ86UU0 1499 aa23.18■■□□□ 1.3
C1S-220ENST00000543187 POGKQ9P215 609 aa23.18■■□□□ 1.3
C1S-220ENST00000543187 DLC1Q96QB1 1528 aa23.18■■□□□ 1.3
C1S-220ENST00000543187 PSME1Q06323 249 aa23.16■■□□□ 1.3
C1S-220ENST00000543187 ATAD2Q6PL18 1390 aa23.15■■□□□ 1.3
C1S-220ENST00000543187 KDM2AQ9Y2K7 1162 aa23.15■■□□□ 1.3
C1S-220ENST00000543187 DCAF11Q8TEB1 546 aa23.14■■□□□ 1.29
C1S-220ENST00000543187 ADGRB1O14514 1584 aa23.14■■□□□ 1.29
C1S-220ENST00000543187 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.13■■□□□ 1.29
C1S-220ENST00000543187 GJD4Q96KN9 370 aaPredicted RBP23.13■■□□□ 1.29
C1S-220ENST00000543187 TRAK1Q9UPV9 953 aa23.13■■□□□ 1.29
C1S-220ENST00000543187 TNS3Q68CZ2 1445 aa23.13■■□□□ 1.29
C1S-220ENST00000543187 HAP1P54257 671 aaPredicted RBP23.12■■□□□ 1.29
C1S-220ENST00000543187 USP32Q8NFA0 1604 aa23.11■■□□□ 1.29
C1S-220ENST00000543187 HRCP23327 699 aa23.11■■□□□ 1.29
C1S-220ENST00000543187 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
C1S-220ENST00000543187 ANKARQ7Z5J8 1434 aa23.1■■□□□ 1.29
C1S-220ENST00000543187 SLIT2O94813 1529 aa23.1■■□□□ 1.29
C1S-220ENST00000543187 UNC5CLQ8IV45 518 aa23.1■■□□□ 1.29
C1S-220ENST00000543187 PMFBP1Q8TBY8 1022 aa23.1■■□□□ 1.29
C1S-220ENST00000543187 SBNO1A3KN83 1393 aa23.1■■□□□ 1.29
C1S-220ENST00000543187 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
C1S-220ENST00000543187 LMOD2Q6P5Q4 547 aa23.09■■□□□ 1.29
C1S-220ENST00000543187 CABLES1Q8TDN4 633 aa23.09■■□□□ 1.29
C1S-220ENST00000543187 STAC3Q96MF2 364 aa23.09■■□□□ 1.29
C1S-220ENST00000543187 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
C1S-220ENST00000543187 MINK1Q8N4C8 1332 aaPredicted RBP23.07■■□□□ 1.28
C1S-220ENST00000543187 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
C1S-220ENST00000543187 GLI3P10071 1580 aa23.05■■□□□ 1.28
C1S-220ENST00000543187 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
C1S-220ENST00000543187 RALGAPBQ86X10 1494 aa23.05■■□□□ 1.28
C1S-220ENST00000543187 EIF3AQ14152 1382 aaKnown RBP23.03■■□□□ 1.28
C1S-220ENST00000543187 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
C1S-220ENST00000543187 NWD2Q9ULI1 1742 aa23.02■■□□□ 1.28
C1S-220ENST00000543187 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
C1S-220ENST00000543187 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
C1S-220ENST00000543187 TULP4Q9NRJ4 1543 aa23.02■■□□□ 1.28
C1S-220ENST00000543187 TRPM3Q9HCF6 1732 aaPredicted RBP23.02■■□□□ 1.28
C1S-220ENST00000543187 EP400Q96L91 3159 aa23.01■■□□□ 1.27
C1S-220ENST00000543187 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
C1S-220ENST00000543187 CCDC125Q86Z20 511 aa23■■□□□ 1.27
C1S-220ENST00000543187 ARHGEF28Q8N1W1 1705 aaKnown RBP22.99■■□□□ 1.27
C1S-220ENST00000543187 BRWD3Q6RI45 1802 aa22.99■■□□□ 1.27
C1S-220ENST00000543187 VPS72Q15906 364 aa22.99■■□□□ 1.27
C1S-220ENST00000543187 ALS2Q96Q42 1657 aa22.98■■□□□ 1.27
C1S-220ENST00000543187 FAM83GA6ND36 823 aa22.97■■□□□ 1.27
C1S-220ENST00000543187 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
C1S-220ENST00000543187 NGDNQ8NEJ9 315 aaKnown RBP22.96■■□□□ 1.27
C1S-220ENST00000543187 SEPT12Q8IYM1 358 aa22.95■■□□□ 1.26
C1S-220ENST00000543187 ITSN1Q15811 1721 aa22.94■■□□□ 1.26
C1S-220ENST00000543187 PAK3O75914 559 aaPredicted RBP22.93■■□□□ 1.26
C1S-220ENST00000543187 ONECUT3O60422 494 aaPredicted RBP22.92■■□□□ 1.26
C1S-220ENST00000543187 NUDT16Q96DE0 195 aaKnown RBP22.92■■□□□ 1.26
C1S-220ENST00000543187 KIAA1210Q9ULL0 1709 aa22.91■■□□□ 1.26
C1S-220ENST00000543187 BTG4Q9NY30 223 aa22.91■■□□□ 1.26
C1S-220ENST00000543187 ZRANB1Q9UGI0 708 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms