RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 KCNA6P17658 529 aa14.82□□□□□ -0.04
DDB1-221ENST00000543162 DDX10Q13206 875 aaKnown RBP14.82□□□□□ -0.04
DDB1-221ENST00000543162 MINK1Q8N4C8 1332 aaPredicted RBP14.82□□□□□ -0.04
DDB1-221ENST00000543162 EVC2Q86UK5 1308 aa14.81□□□□□ -0.04
DDB1-221ENST00000543162 DIEXFQ68CQ4 756 aaKnown RBP14.8□□□□□ -0.04
DDB1-221ENST00000543162 NWD1Q149M9 1564 aa14.79□□□□□ -0.04
DDB1-221ENST00000543162 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
DDB1-221ENST00000543162 TULP4Q9NRJ4 1543 aa14.78□□□□□ -0.04
DDB1-221ENST00000543162 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
DDB1-221ENST00000543162 SRPK2P78362 688 aaKnown RBP14.76□□□□□ -0.05
DDB1-221ENST00000543162 PUS7Q96PZ0 661 aaKnown RBP14.76□□□□□ -0.05
DDB1-221ENST00000543162 NKTRP30414 1462 aaKnown RBP14.76□□□□□ -0.05
DDB1-221ENST00000543162 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.75□□□□□ -0.05
DDB1-221ENST00000543162 CDK19Q9BWU1 502 aa14.75□□□□□ -0.05
DDB1-221ENST00000543162 ADGRB2O60241 1585 aa14.74□□□□□ -0.05
DDB1-221ENST00000543162 WASLO00401 505 aaPredicted RBP14.74□□□□□ -0.05
DDB1-221ENST00000543162 PROSER2Q86WR7 435 aaPredicted RBP14.74□□□□□ -0.05
DDB1-221ENST00000543162 CABP2Q9NPB3 220 aa14.74□□□□□ -0.05
DDB1-221ENST00000543162 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
DDB1-221ENST00000543162 STRCP1A6NGW2 1772 aa14.72□□□□□ -0.05
DDB1-221ENST00000543162 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
DDB1-221ENST00000543162 RBM33Q96EV2 1170 aaKnown RBP14.71□□□□□ -0.05
DDB1-221ENST00000543162 MYOM1P52179 1685 aa14.71□□□□□ -0.06
DDB1-221ENST00000543162 ADGRL3Q9HAR2 1447 aa14.7□□□□□ -0.06
DDB1-221ENST00000543162 TMC1Q8TDI8 760 aa14.7□□□□□ -0.06
DDB1-221ENST00000543162 NALCNQ8IZF0 1738 aa14.69□□□□□ -0.06
DDB1-221ENST00000543162 ZNF335Q9H4Z2 1342 aaPredicted RBP14.69□□□□□ -0.06
DDB1-221ENST00000543162 PANK3Q9H999 370 aa14.69□□□□□ -0.06
DDB1-221ENST00000543162 NINLQ9Y2I6 1382 aa14.69□□□□□ -0.06
DDB1-221ENST00000543162 SLC12A5Q9H2X9 1139 aa14.68□□□□□ -0.06
DDB1-221ENST00000543162 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
DDB1-221ENST00000543162 TMEM94Q12767 1356 aa14.67□□□□□ -0.06
DDB1-221ENST00000543162 CDC42BPGQ6DT37 1551 aa14.67□□□□□ -0.06
DDB1-221ENST00000543162 NCOA3Q9Y6Q9 1424 aa14.66□□□□□ -0.06
DDB1-221ENST00000543162 CCDC61Q9Y6R9 512 aa14.66□□□□□ -0.06
DDB1-221ENST00000543162 ATP7BP35670 1465 aa14.65□□□□□ -0.06
DDB1-221ENST00000543162 NUTM2FA1L443 756 aa14.65□□□□□ -0.06
DDB1-221ENST00000543162 CABP1Q9NZU7 370 aa14.65□□□□□ -0.06
DDB1-221ENST00000543162 FMN2Q9NZ56 1722 aa14.65□□□□□ -0.06
DDB1-221ENST00000543162 PRR36Q9H6K5 1346 aa14.65□□□□□ -0.06
DDB1-221ENST00000543162 C19orf44Q9H6X5 657 aa14.64□□□□□ -0.07
DDB1-221ENST00000543162 TERF2IPQ9NYB0 399 aa14.64□□□□□ -0.07
DDB1-221ENST00000543162 LRRC7Q96NW7 1537 aa14.64□□□□□ -0.07
DDB1-221ENST00000543162 PPIP5K1Q6PFW1 1433 aa14.64□□□□□ -0.07
DDB1-221ENST00000543162 ANKARQ7Z5J8 1434 aa14.64□□□□□ -0.07
DDB1-221ENST00000543162 ANKRD36BQ8N2N9 1353 aa14.63□□□□□ -0.07
DDB1-221ENST00000543162 ANP32CO43423 234 aa14.63□□□□□ -0.07
DDB1-221ENST00000543162 KNSTRNQ9Y448 316 aa14.63□□□□□ -0.07
DDB1-221ENST00000543162 PER1O15534 1290 aaPredicted RBP14.62□□□□□ -0.07
DDB1-221ENST00000543162 HDGFL2Q7Z4V5 671 aaPredicted RBP14.62□□□□□ -0.07
DDB1-221ENST00000543162 USP32Q8NFA0 1604 aa14.62□□□□□ -0.07
DDB1-221ENST00000543162 TOPAZ1Q8N9V7 1692 aa14.61□□□□□ -0.07
DDB1-221ENST00000543162 MSH6P52701 1360 aa14.61□□□□□ -0.07
DDB1-221ENST00000543162 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
DDB1-221ENST00000543162 DCCP43146 1447 aa14.61□□□□□ -0.07
DDB1-221ENST00000543162 ATF3P18847 181 aa14.61□□□□□ -0.07
DDB1-221ENST00000543162 CARD14Q9BXL6 1004 aa14.61□□□□□ -0.07
DDB1-221ENST00000543162 A0A1W2PP64 1363 aa14.6□□□□□ -0.07
DDB1-221ENST00000543162 XIRP1Q702N8 1843 aaKnown RBP14.6□□□□□ -0.07
DDB1-221ENST00000543162 MIER1Q8N108 512 aa14.6□□□□□ -0.07
DDB1-221ENST00000543162 RGPD8O14715 1765 aaPredicted RBP14.6□□□□□ -0.07
DDB1-221ENST00000543162 CD163L1Q9NR16 1453 aa14.59□□□□□ -0.07
DDB1-221ENST00000543162 PLEKHG3A1L390 1219 aa14.59□□□□□ -0.07
DDB1-221ENST00000543162 NSD3Q9BZ95 1437 aa14.58□□□□□ -0.07
DDB1-221ENST00000543162 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
DDB1-221ENST00000543162 CADPS2Q86UW7 1296 aa14.58□□□□□ -0.08
DDB1-221ENST00000543162 CPSF1Q10570 1443 aaKnown RBP14.58□□□□□ -0.08
DDB1-221ENST00000543162 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
DDB1-221ENST00000543162 KTN1Q86UP2 1357 aaKnown RBP14.57□□□□□ -0.08
DDB1-221ENST00000543162 LTBP4Q8N2S1 1624 aa14.56□□□□□ -0.08
DDB1-221ENST00000543162 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
DDB1-221ENST00000543162 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
DDB1-221ENST00000543162 PMFBP1Q8TBY8 1022 aa14.56□□□□□ -0.08
DDB1-221ENST00000543162 PRKRIP1Q9H875 184 aaPredicted RBP14.56□□□□□ -0.08
DDB1-221ENST00000543162 ACEP12821 1306 aa14.56□□□□□ -0.08
DDB1-221ENST00000543162 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
DDB1-221ENST00000543162 AKAP12Q02952 1782 aa14.55□□□□□ -0.08
DDB1-221ENST00000543162 ESCO1Q5FWF5 840 aa14.55□□□□□ -0.08
DDB1-221ENST00000543162 CC2D1BQ5T0F9 858 aaKnown RBP14.55□□□□□ -0.08
DDB1-221ENST00000543162 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
DDB1-221ENST00000543162 NPC1L1Q9UHC9 1359 aa14.55□□□□□ -0.08
DDB1-221ENST00000543162 MST1RQ04912 1400 aa14.55□□□□□ -0.08
DDB1-221ENST00000543162 C1orf167Q5SNV9 1468 aa14.55□□□□□ -0.08
DDB1-221ENST00000543162 POLR3AO14802 1390 aaPredicted RBP14.54□□□□□ -0.08
DDB1-221ENST00000543162 EDC4Q6P2E9 1401 aaKnown RBP14.54□□□□□ -0.08
DDB1-221ENST00000543162 MON2Q7Z3U7 1717 aa14.54□□□□□ -0.08
DDB1-221ENST00000543162 RALBP1Q15311 655 aa14.53□□□□□ -0.08
DDB1-221ENST00000543162 USP6P35125 1406 aa14.52□□□□□ -0.08
DDB1-221ENST00000543162 ORAI2Q96SN7 254 aa14.52□□□□□ -0.09
DDB1-221ENST00000543162 NSD2O96028 1365 aa14.51□□□□□ -0.09
DDB1-221ENST00000543162 PARD3Q8TEW0 1356 aa14.51□□□□□ -0.09
DDB1-221ENST00000543162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.51□□□□□ -0.09
DDB1-221ENST00000543162 KIF1AQ12756 1690 aa14.51□□□□□ -0.09
DDB1-221ENST00000543162 SLAIN2Q9P270 581 aa14.5□□□□□ -0.09
DDB1-221ENST00000543162 TTC21BQ7Z4L5 1316 aa14.49□□□□□ -0.09
DDB1-221ENST00000543162 FYB1O15117 783 aa14.49□□□□□ -0.09
DDB1-221ENST00000543162 KIF20BQ96Q89 1820 aa14.49□□□□□ -0.09
DDB1-221ENST00000543162 NRKQ7Z2Y5 1582 aa14.48□□□□□ -0.09
DDB1-221ENST00000543162 MYBBP1AQ9BQG0 1328 aaKnown RBP14.48□□□□□ -0.09
DDB1-221ENST00000543162 CCER2I3L3R5 266 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms