RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.18
RFC5-209ENST00000543153 FOSBP53539 338 aa16.2■□□□□ 0.18
RFC5-209ENST00000543153 EN1Q05925 392 aaPredicted RBP16.2■□□□□ 0.18
RFC5-209ENST00000543153 ZNF454Q8N9F8 522 aa16.2■□□□□ 0.18
RFC5-209ENST00000543153 REREQ9P2R6 1566 aa16.2■□□□□ 0.18
RFC5-209ENST00000543153 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
RFC5-209ENST00000543153 SLC24A3Q9HC58 644 aa16.19■□□□□ 0.18
RFC5-209ENST00000543153 PSDA5PKW4 1024 aaPredicted RBP16.18■□□□□ 0.18
RFC5-209ENST00000543153 SYCP2Q9BX26 1530 aa16.18■□□□□ 0.18
RFC5-209ENST00000543153 CDC42BPAQ5VT25 1732 aa16.17■□□□□ 0.18
RFC5-209ENST00000543153 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
RFC5-209ENST00000543153 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
RFC5-209ENST00000543153 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
RFC5-209ENST00000543153 HOXB1P14653 301 aaPredicted RBP16.16■□□□□ 0.18
RFC5-209ENST00000543153 HIC1Q14526 733 aa16.16■□□□□ 0.18
RFC5-209ENST00000543153 ZDHHC16Q969W1 377 aa16.16■□□□□ 0.18
RFC5-209ENST00000543153 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
RFC5-209ENST00000543153 SPAG9O60271 1321 aaKnown RBP16.16■□□□□ 0.18
RFC5-209ENST00000543153 AGLP35573 1532 aa16.15■□□□□ 0.18
RFC5-209ENST00000543153 CERKQ8TCT0 537 aa16.15■□□□□ 0.18
RFC5-209ENST00000543153 SAMD9LQ8IVG5 1584 aa16.14■□□□□ 0.17
RFC5-209ENST00000543153 GPR37O15354 613 aa16.14■□□□□ 0.17
RFC5-209ENST00000543153 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.17
RFC5-209ENST00000543153 LHX6Q9UPM6 363 aa16.14■□□□□ 0.17
RFC5-209ENST00000543153 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.17
RFC5-209ENST00000543153 CNTLNQ9NXG0 1405 aa16.13■□□□□ 0.17
RFC5-209ENST00000543153 GNPATO15228 680 aa16.13■□□□□ 0.17
RFC5-209ENST00000543153 AK7Q96M32 723 aa16.13■□□□□ 0.17
RFC5-209ENST00000543153 KIDINS220Q9ULH0 1771 aa16.13■□□□□ 0.17
RFC5-209ENST00000543153 PLEKHH2Q8IVE3 1493 aa16.12■□□□□ 0.17
RFC5-209ENST00000543153 PTGDRQ13258 359 aa16.12■□□□□ 0.17
RFC5-209ENST00000543153 C3P01024 1663 aa16.11■□□□□ 0.17
RFC5-209ENST00000543153 PPP4R3BQ5MIZ7 849 aa16.11■□□□□ 0.17
RFC5-209ENST00000543153 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
RFC5-209ENST00000543153 MINK1Q8N4C8 1332 aaPredicted RBP16.09■□□□□ 0.17
RFC5-209ENST00000543153 KIAA1107Q9UPP5 1409 aa16.08■□□□□ 0.16
RFC5-209ENST00000543153 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
RFC5-209ENST00000543153 C6orf132Q5T0Z8 1188 aa16.07■□□□□ 0.16
RFC5-209ENST00000543153 EHBP1L1Q8N3D4 1523 aa16.07■□□□□ 0.16
RFC5-209ENST00000543153 SUPT6HQ7KZ85 1726 aaKnown RBP16.06■□□□□ 0.16
RFC5-209ENST00000543153 MAP2K5Q13163 448 aa16.06■□□□□ 0.16
RFC5-209ENST00000543153 CDHR5Q9HBB8 845 aa16.06■□□□□ 0.16
RFC5-209ENST00000543153 INO80Q9ULG1 1556 aaPredicted RBP16.05■□□□□ 0.16
RFC5-209ENST00000543153 A2MP01023 1474 aa16.05■□□□□ 0.16
RFC5-209ENST00000543153 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
RFC5-209ENST00000543153 GGT6Q6P531 493 aa16.05■□□□□ 0.16
RFC5-209ENST00000543153 ADAM33Q9BZ11 813 aa16.05■□□□□ 0.16
RFC5-209ENST00000543153 NPATQ14207 1427 aa16.03■□□□□ 0.16
RFC5-209ENST00000543153 STRCQ7RTU9 1775 aa16.03■□□□□ 0.16
RFC5-209ENST00000543153 ZMYM3Q14202 1370 aa16.03■□□□□ 0.16
RFC5-209ENST00000543153 NPDC1Q9NQX5 325 aaPredicted RBP16.03■□□□□ 0.16
RFC5-209ENST00000543153 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
RFC5-209ENST00000543153 MROH2AA6NES4 1674 aa16.02■□□□□ 0.16
RFC5-209ENST00000543153 SETD1BQ9UPS6 1966 aaKnown RBP16.02■□□□□ 0.16
RFC5-209ENST00000543153 ZNF644Q9H582 1327 aaPredicted RBP16.02■□□□□ 0.16
RFC5-209ENST00000543153 PTPRTO14522 1441 aa16.02■□□□□ 0.15
RFC5-209ENST00000543153 PLXNC1O60486 1568 aa16.01■□□□□ 0.15
RFC5-209ENST00000543153 IRF6O14896 467 aa16.01■□□□□ 0.15
RFC5-209ENST00000543153 CLTCQ00610 1675 aaKnown RBP16■□□□□ 0.15
RFC5-209ENST00000543153 NCOA1Q15788 1441 aa16■□□□□ 0.15
RFC5-209ENST00000543153 CAMSAP1Q5T5Y3 1602 aa15.99■□□□□ 0.15
RFC5-209ENST00000543153 BCL2L12Q9HB09 334 aa15.99■□□□□ 0.15
RFC5-209ENST00000543153 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
RFC5-209ENST00000543153 ADGBQ8N7X0 1667 aa15.98■□□□□ 0.15
RFC5-209ENST00000543153 FECHP22830 423 aa15.97■□□□□ 0.15
RFC5-209ENST00000543153 PTPREP23469 700 aa15.97■□□□□ 0.15
RFC5-209ENST00000543153 TRIM66O15016 1216 aa15.96■□□□□ 0.15
RFC5-209ENST00000543153 CCDC102AQ96A19 550 aa15.96■□□□□ 0.15
RFC5-209ENST00000543153 MYO3AQ8NEV4 1616 aa15.96■□□□□ 0.15
RFC5-209ENST00000543153 NCOA2Q15596 1464 aa15.96■□□□□ 0.14
RFC5-209ENST00000543153 ERBB3P21860 1342 aa15.95■□□□□ 0.14
RFC5-209ENST00000543153 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
RFC5-209ENST00000543153 CAMSAP2Q08AD1 1489 aa15.95■□□□□ 0.14
RFC5-209ENST00000543153 CCDC141Q6ZP82 1450 aa15.95■□□□□ 0.14
RFC5-209ENST00000543153 MBD5Q9P267 1494 aa15.95■□□□□ 0.14
RFC5-209ENST00000543153 ST18O60284 1047 aa15.94■□□□□ 0.14
RFC5-209ENST00000543153 CEP170BQ9Y4F5 1589 aaPredicted RBP15.94■□□□□ 0.14
RFC5-209ENST00000543153 RTEL1-TNFRSF6BF6WH68 1400 aa15.94■□□□□ 0.14
RFC5-209ENST00000543153 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
RFC5-209ENST00000543153 KIF3BO15066 747 aa15.93■□□□□ 0.14
RFC5-209ENST00000543153 DHX29Q7Z478 1369 aaKnown RBP15.92■□□□□ 0.14
RFC5-209ENST00000543153 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
RFC5-209ENST00000543153 DISP3Q9P2K9 1392 aa15.91■□□□□ 0.14
RFC5-209ENST00000543153 EMP3P54852 163 aa15.91■□□□□ 0.14
RFC5-209ENST00000543153 FAM163AQ96GL9 167 aaPredicted RBP15.91■□□□□ 0.14
RFC5-209ENST00000543153 ZNF142P52746 1687 aaPredicted RBP15.91■□□□□ 0.14
RFC5-209ENST00000543153 PRSS12P56730 875 aa15.9■□□□□ 0.14
RFC5-209ENST00000543153 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
RFC5-209ENST00000543153 LTBP4Q8N2S1 1624 aa15.9■□□□□ 0.14
RFC5-209ENST00000543153 PPP1R3GB7ZBB8 358 aa15.89■□□□□ 0.13
RFC5-209ENST00000543153 TSPY4P0CV99 314 aa15.89■□□□□ 0.13
RFC5-209ENST00000543153 TSPY10P0CW01 314 aa15.89■□□□□ 0.13
RFC5-209ENST00000543153 PDE4DQ08499 809 aa15.89■□□□□ 0.13
RFC5-209ENST00000543153 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
RFC5-209ENST00000543153 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
RFC5-209ENST00000543153 WASHC2CQ9Y4E1 1318 aa15.89■□□□□ 0.13
RFC5-209ENST00000543153 KDM5DQ9BY66 1539 aa15.89■□□□□ 0.13
RFC5-209ENST00000543153 VARS2Q5ST30 1063 aaKnown RBP15.88■□□□□ 0.13
RFC5-209ENST00000543153 PADI6Q6TGC4 694 aa15.88■□□□□ 0.13
RFC5-209ENST00000543153 VPS8Q8N3P4 1428 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms