RNA–Protein interactions for RNA: ENST00000543087.5

TSG101-208, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-208ENST00000543087 LRRC59Q96AG4 307 aaKnown RBP19.14■□□□□ 0.65
TSG101-208ENST00000543087 SPATA31A6Q5VVP1 1343 aa19.14■□□□□ 0.65
TSG101-208ENST00000543087 YTHDC2Q9H6S0 1430 aaKnown RBP19.14■□□□□ 0.65
TSG101-208ENST00000543087 DCAF11Q8TEB1 546 aa19.13■□□□□ 0.65
TSG101-208ENST00000543087 ABCC11Q96J66 1382 aa19.13■□□□□ 0.65
TSG101-208ENST00000543087 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
TSG101-208ENST00000543087 KNDC1Q76NI1 1749 aa19.13■□□□□ 0.65
TSG101-208ENST00000543087 LRP6O75581 1613 aa19.12■□□□□ 0.65
TSG101-208ENST00000543087 MYOM2P54296 1465 aa19.12■□□□□ 0.65
TSG101-208ENST00000543087 DHX57Q6P158 1386 aaKnown RBP19.11■□□□□ 0.65
TSG101-208ENST00000543087 ESCO1Q5FWF5 840 aa19.11■□□□□ 0.65
TSG101-208ENST00000543087 NRXN1Q9ULB1 1477 aa19.1■□□□□ 0.65
TSG101-208ENST00000543087 TECPR2O15040 1411 aa19.1■□□□□ 0.65
TSG101-208ENST00000543087 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
TSG101-208ENST00000543087 LAMC1P11047 1609 aa19.09■□□□□ 0.65
TSG101-208ENST00000543087 CDC42BPGQ6DT37 1551 aa19.08■□□□□ 0.65
TSG101-208ENST00000543087 RGPD8O14715 1765 aaPredicted RBP19.06■□□□□ 0.64
TSG101-208ENST00000543087 SIRT1Q96EB6 747 aa19.06■□□□□ 0.64
TSG101-208ENST00000543087 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
TSG101-208ENST00000543087 FOXO3O43524 673 aa19.05■□□□□ 0.64
TSG101-208ENST00000543087 XPCQ01831 940 aaPredicted RBP19.05■□□□□ 0.64
TSG101-208ENST00000543087 POGKQ9P215 609 aa19.05■□□□□ 0.64
TSG101-208ENST00000543087 TRAK1Q9UPV9 953 aa19.05■□□□□ 0.64
TSG101-208ENST00000543087 PNPLA6Q8IY17 1366 aa19.05■□□□□ 0.64
TSG101-208ENST00000543087 SOS2Q07890 1332 aaPredicted RBP19.04■□□□□ 0.64
TSG101-208ENST00000543087 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
TSG101-208ENST00000543087 ZNF772Q68DY9 489 aaPredicted RBP19.02■□□□□ 0.64
TSG101-208ENST00000543087 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
TSG101-208ENST00000543087 C8orf37Q96NL8 207 aa19.01■□□□□ 0.63
TSG101-208ENST00000543087 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
TSG101-208ENST00000543087 STAC3Q96MF2 364 aa19■□□□□ 0.63
TSG101-208ENST00000543087 AFF2P51816 1311 aa19■□□□□ 0.63
TSG101-208ENST00000543087 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
TSG101-208ENST00000543087 HIRIP3Q9BW71 556 aaPredicted RBP18.98■□□□□ 0.63
TSG101-208ENST00000543087 MINK1Q8N4C8 1332 aaPredicted RBP18.98■□□□□ 0.63
TSG101-208ENST00000543087 DLC1Q96QB1 1528 aa18.97■□□□□ 0.63
TSG101-208ENST00000543087 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
TSG101-208ENST00000543087 PXDNQ92626 1479 aa18.97■□□□□ 0.63
TSG101-208ENST00000543087 RXRBP28702 533 aa18.95■□□□□ 0.62
TSG101-208ENST00000543087 KRT28Q7Z3Y7 464 aa18.95■□□□□ 0.62
TSG101-208ENST00000543087 PHF8Q9UPP1 1060 aa18.95■□□□□ 0.62
TSG101-208ENST00000543087 KIF1AQ12756 1690 aa18.94■□□□□ 0.62
TSG101-208ENST00000543087 QTRT2Q9H974 415 aaKnown RBP18.93■□□□□ 0.62
TSG101-208ENST00000543087 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
TSG101-208ENST00000543087 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
TSG101-208ENST00000543087 PMFBP1Q8TBY8 1022 aa18.92■□□□□ 0.62
TSG101-208ENST00000543087 PSME1Q06323 249 aa18.91■□□□□ 0.62
TSG101-208ENST00000543087 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
TSG101-208ENST00000543087 USP32Q8NFA0 1604 aa18.9■□□□□ 0.62
TSG101-208ENST00000543087 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
TSG101-208ENST00000543087 NBPF1Q3BBV0 1214 aa18.9■□□□□ 0.62
TSG101-208ENST00000543087 ARHGEF28Q8N1W1 1705 aaKnown RBP18.9■□□□□ 0.62
TSG101-208ENST00000543087 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.61
TSG101-208ENST00000543087 SPATA31A3Q5VYP0 1347 aa18.89■□□□□ 0.61
TSG101-208ENST00000543087 MARF1Q9Y4F3 1742 aaKnown RBP18.88■□□□□ 0.61
TSG101-208ENST00000543087 WASLO00401 505 aaPredicted RBP18.88■□□□□ 0.61
TSG101-208ENST00000543087 USP21Q9UK80 565 aa18.88■□□□□ 0.61
TSG101-208ENST00000543087 ADGRB2O60241 1585 aa18.88■□□□□ 0.61
TSG101-208ENST00000543087 KIAA1210Q9ULL0 1709 aa18.88■□□□□ 0.61
TSG101-208ENST00000543087 L3MBTL2Q969R5 705 aa18.87■□□□□ 0.61
TSG101-208ENST00000543087 ANKARQ7Z5J8 1434 aa18.85■□□□□ 0.61
TSG101-208ENST00000543087 PRR36Q9H6K5 1346 aa18.85■□□□□ 0.61
TSG101-208ENST00000543087 RBM6P78332 1123 aaKnown RBP18.85■□□□□ 0.61
TSG101-208ENST00000543087 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
TSG101-208ENST00000543087 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
TSG101-208ENST00000543087 FNBP4Q8N3X1 1017 aaPredicted RBP18.83■□□□□ 0.6
TSG101-208ENST00000543087 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
TSG101-208ENST00000543087 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
TSG101-208ENST00000543087 CDK19Q9BWU1 502 aa18.82■□□□□ 0.6
TSG101-208ENST00000543087 TRPC5Q9UL62 973 aaPredicted RBP18.82■□□□□ 0.6
TSG101-208ENST00000543087 TULP4Q9NRJ4 1543 aa18.82■□□□□ 0.6
TSG101-208ENST00000543087 TNS3Q68CZ2 1445 aa18.82■□□□□ 0.6
TSG101-208ENST00000543087 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
TSG101-208ENST00000543087 SBNO1A3KN83 1393 aa18.81■□□□□ 0.6
TSG101-208ENST00000543087 GPRASP1Q5JY77 1395 aa18.8■□□□□ 0.6
TSG101-208ENST00000543087 PAK3O75914 559 aaPredicted RBP18.79■□□□□ 0.6
TSG101-208ENST00000543087 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
TSG101-208ENST00000543087 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
TSG101-208ENST00000543087 BCL9LQ86UU0 1499 aa18.77■□□□□ 0.6
TSG101-208ENST00000543087 TRPM3Q9HCF6 1732 aaPredicted RBP18.77■□□□□ 0.6
TSG101-208ENST00000543087 RGS12O14924 1447 aa18.77■□□□□ 0.6
TSG101-208ENST00000543087 UPF1Q92900 1129 aaKnown RBP eCLIP18.77■□□□□ 0.6
TSG101-208ENST00000543087 ARHGEF10O15013 1369 aa18.77■□□□□ 0.6
TSG101-208ENST00000543087 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
TSG101-208ENST00000543087 CENPJQ9HC77 1338 aaPredicted RBP18.75■□□□□ 0.59
TSG101-208ENST00000543087 ATRNO75882 1429 aa18.75■□□□□ 0.59
TSG101-208ENST00000543087 ABCA3Q99758 1704 aa18.75■□□□□ 0.59
TSG101-208ENST00000543087 ATP7BP35670 1465 aa18.74■□□□□ 0.59
TSG101-208ENST00000543087 UNC5CLQ8IV45 518 aa18.74■□□□□ 0.59
TSG101-208ENST00000543087 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
TSG101-208ENST00000543087 ALS2Q96Q42 1657 aa18.73■□□□□ 0.59
TSG101-208ENST00000543087 QRICH2Q9H0J4 1663 aa18.73■□□□□ 0.59
TSG101-208ENST00000543087 SRPK2P78362 688 aaKnown RBP18.73■□□□□ 0.59
TSG101-208ENST00000543087 FAM83GA6ND36 823 aa18.72■□□□□ 0.59
TSG101-208ENST00000543087 GJD4Q96KN9 370 aaPredicted RBP18.72■□□□□ 0.59
TSG101-208ENST00000543087 CABP2Q9NPB3 220 aa18.72■□□□□ 0.59
TSG101-208ENST00000543087 CCDC61Q9Y6R9 512 aa18.72■□□□□ 0.59
TSG101-208ENST00000543087 ACEP12821 1306 aa18.72■□□□□ 0.59
TSG101-208ENST00000543087 SLIT2O94813 1529 aa18.71■□□□□ 0.59
TSG101-208ENST00000543087 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms